| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750802
Identifier: 86750802
GI number: 86750802
Start: 4231958
End: 4232356
Strand: Reverse
Name: 86750802
Synonym: RPB_3692
Alternate gene names: NA
Gene position: 4232356-4231958 (Counterclockwise)
Preceding gene: 86750811
Following gene: 86750800
Centisome position: 79.38
GC content: 56.64
Gene sequence:
>399_bases ATGTCGTCCTCTGAGGATCTTCAGGACCAAATCTGGGACAGGCTGTATGCACAGCTTGTCGCCTTTTTCGAACGGCAGGG GAAAGAGGATGCCTTCGGCCGAGGCGATTTCTGGGTGGTTGACGACAACTACGGCTGGCCGAACAACATGGTCTATTTCT TCAATCTCGACCTGATGACCGTCGCACACATTCTGCACGTTCAGAGCCTGCTCGCCGACTGCCCGCCATGGAGTGTCTAT CTGGTCGTCGATGTGGTGGGCAAGGAGACCGAATGGCCGCCGATGGGCGTCACCGTCCGTCGCCATGAAATCATCGACGG CCTGGTGCGGAAGTATTTGCCGGAGAAATTCAAGTTCTTGAAAATTCCGGGGAGCAGGCCCGGGACGGGGTACGATTGA
Upstream 100 bases:
>100_bases GTGGGATCCGAGCATTCGGCGCTTCCACATGAGGCTGTGGCTGCGCGAAAGCATGTACTGGCTGCGGCGGGGTTGTCCGC GGGCGTGAGTAGGCCGATCG
Downstream 100 bases:
>100_bases GCGCGTCGCCGCCTCCAGAAAATGGTCCGATAACGACTATCATCCGCTCGTCCGGGGCGGGGAGGCCACCGAATTGCCGC GCGTTCAGCGGCGCCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSSSEDLQDQIWDRLYAQLVAFFERQGKEDAFGRGDFWVVDDNYGWPNNMVYFFNLDLMTVAHILHVQSLLADCPPWSVY LVVDVVGKETEWPPMGVTVRRHEIIDGLVRKYLPEKFKFLKIPGSRPGTGYD
Sequences:
>Translated_132_residues MSSSEDLQDQIWDRLYAQLVAFFERQGKEDAFGRGDFWVVDDNYGWPNNMVYFFNLDLMTVAHILHVQSLLADCPPWSVY LVVDVVGKETEWPPMGVTVRRHEIIDGLVRKYLPEKFKFLKIPGSRPGTGYD >Mature_131_residues SSSEDLQDQIWDRLYAQLVAFFERQGKEDAFGRGDFWVVDDNYGWPNNMVYFFNLDLMTVAHILHVQSLLADCPPWSVYL VVDVVGKETEWPPMGVTVRRHEIIDGLVRKYLPEKFKFLKIPGSRPGTGYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15331; Mature: 15199
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSEDLQDQIWDRLYAQLVAFFERQGKEDAFGRGDFWVVDDNYGWPNNMVYFFNLDLMT CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEECHHHH VAHILHVQSLLADCPPWSVYLVVDVVGKETEWPPMGVTVRRHEIIDGLVRKYLPEKFKFL HHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHCCHHEEEE KIPGSRPGTGYD ECCCCCCCCCCC >Mature Secondary Structure SSSEDLQDQIWDRLYAQLVAFFERQGKEDAFGRGDFWVVDDNYGWPNNMVYFFNLDLMT CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEECHHHH VAHILHVQSLLADCPPWSVYLVVDVVGKETEWPPMGVTVRRHEIIDGLVRKYLPEKFKFL HHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHCCHHEEEE KIPGSRPGTGYD ECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA