| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750781
Identifier: 86750781
GI number: 86750781
Start: 4211842
End: 4212225
Strand: Reverse
Name: 86750781
Synonym: RPB_3671
Alternate gene names: NA
Gene position: 4212225-4211842 (Counterclockwise)
Preceding gene: 86750782
Following gene: 86750779
Centisome position: 79.0
GC content: 67.19
Gene sequence:
>384_bases TTGGGGTTGTCTGCTGCTCCGCGCCGCCGCGGCGCGCTTCTTGCTGCCTTGTCGATCGCTTTGTCGATCGCGACCGTGCC GGCCCATGCCGCCGGAGCCCTTGCCGTCGGCAAATGCGGGGCCTACGGCAAGGCCTTCGACTATGCCGCCGATGCCGCCG CCGTCGAAGCGGCGCGCAAGCAATGCAACGGCGATTGCACCACGATCACGATGCGGCGCGCCTGCGCGGCGCTGGCGATC GACCTGTTGAATCCTTGCGGCGCGCACGGCTATGCCGTCGAGCCGAAGATTTCATCGACGCTGAATGCCGCCACTCGCAA GTGCTACGAATACGGCGGCAAGGAATGCGTGATCCGCGCCTGGGCGTGCGACGCCAAGGGCTGA
Upstream 100 bases:
>100_bases GGATGCCCGCCGGGGCTGAACGCGGCGCCTCGACGGATTATTCACCAAGTTGAAAGCCCTCTCGACCTAAAGTTCCACCG GGTTACTTGGGGAGGGGATC
Downstream 100 bases:
>100_bases CGCGGCTGCGACGCTGTTCGGCCTCGGCTAAGGCATCGACTGCGGAGTACGATCCTCGGGCCGCAGCTTGCCGTCTTCCT TGCGCTGCGCGGCGCGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MGLSAAPRRRGALLAALSIALSIATVPAHAAGALAVGKCGAYGKAFDYAADAAAVEAARKQCNGDCTTITMRRACAALAI DLLNPCGAHGYAVEPKISSTLNAATRKCYEYGGKECVIRAWACDAKG
Sequences:
>Translated_127_residues MGLSAAPRRRGALLAALSIALSIATVPAHAAGALAVGKCGAYGKAFDYAADAAAVEAARKQCNGDCTTITMRRACAALAI DLLNPCGAHGYAVEPKISSTLNAATRKCYEYGGKECVIRAWACDAKG >Mature_126_residues GLSAAPRRRGALLAALSIALSIATVPAHAAGALAVGKCGAYGKAFDYAADAAAVEAARKQCNGDCTTITMRRACAALAID LLNPCGAHGYAVEPKISSTLNAATRKCYEYGGKECVIRAWACDAKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12934; Mature: 12803
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSAAPRRRGALLAALSIALSIATVPAHAAGALAVGKCGAYGKAFDYAADAAAVEAARK CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH QCNGDCTTITMRRACAALAIDLLNPCGAHGYAVEPKISSTLNAATRKCYEYGGKECVIRA HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEE WACDAKG EECCCCC >Mature Secondary Structure GLSAAPRRRGALLAALSIALSIATVPAHAAGALAVGKCGAYGKAFDYAADAAAVEAARK CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH QCNGDCTTITMRRACAALAIDLLNPCGAHGYAVEPKISSTLNAATRKCYEYGGKECVIRA HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEE WACDAKG EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA