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The map label for this gene is ybhS [H]

Identifier: 86750776

GI number: 86750776

Start: 4207840

End: 4209012

Strand: Reverse

Name: ybhS [H]

Synonym: RPB_3666

Alternate gene names: 86750776

Gene position: 4209012-4207840 (Counterclockwise)

Preceding gene: 86750777

Following gene: 86750775

Centisome position: 78.94

GC content: 64.88

Gene sequence:

>1173_bases
ATGAGCGCCGCGGACGACAGCGCCACCGGCCGCATCCAGCCGATCAAGCCTCCGCGTTTCGGCTTCCTGCGCCGCACCTA
TGCGATGCTGGTGAAGGAACTGATCCAGCTCCGCCGCGACCGTCTCACCTTCGCGATGATCGTGGTGATCCCGGTGATGC
AGCTCCTGCTGTTCGGCTACGCCATCAACACCACGCCCCGGCATCTGCCGACCGCGGTGCTGCTCCAGGAGGACAGCGAT
CTCGGGCGTTCGATCCTGAAGGCGCTGGAGAACACAGCGTATTTCGATTTCGTCCAGGAGGTGCAGAGCGTCGAGCAGTT
CGACAATCTGCTGTTGTCCGGCAAAGTGCTGTTCGGCGTCGAGATCCCGCGCGGCTTCGAGCGCGCGGTGCGGCGCGGCG
AGCGGCCGGCGCTGCTGGTCGCCGCCGACGCCACTGATCCGGTCGCGGCCGGCTCTGCCCTGTCGGCTCTCGGCCGGATC
GTGCAGACCGCGCTGGAGCACGACCGCGTCGCCGGCGATCCCGGCAATCCGCCGTTCGAGATCCGCGCGCATGCGCGCTA
CAATCCGGCGGCGTCGTCGCGGCTCAACATCGTGCCCGGCCTGGTCGGCACCATCCTGACGATGACCATGCTGATCTTCA
CCGCGCTGTCGGTGACGCGCGAGATCGAACGCGGCACCATGGAAAACCTGCTGTCGATGCCGATCACACCGGTCGAGGTG
ATGCTCGGCAAGATCCTGCCTTATGTCGGCGTCGGCTTCATTCAGGCGTCGCTGATCATCGGCATCGGCGTGTTCTTGTT
CGGCGTGCCGCTGCGCGGCAGCCTGTTGCTGCTGGCGCTGCTGTCGACGTTGTTCATCACCACCAATCTGGCGATCGGCT
ACACTTTCTCGACGCTGGTGCAGAACCAGTTGCAGGCGATGCAGGCCTCGATGATGTTCTTCCTGCCGTCGATCCTGCTG
TCCGGCTTCATGTTCCCGTTCGCCGGGATGCCGCAATGGGCGCAGTATCTCGGCGAATGCCTGCCGCTGACGCATTATGT
GCGGATCGTCCGGGCGATCATGCTGAAGGGATCGACGCTGGAGAATCTGCGCTACGACACGCTGGCGCTGGCGGCCCTGA
TGCTGATAGCGATGACGATCGCGGTGACCCGATTCCGCAGGACGCTGGACTGA

Upstream 100 bases:

>100_bases
CGCCCTATCGCAGCCGGACCGGCCAGCACTGGCAGCACGGCGCCCCGTCACTCGAGGACGTGTTCATCGAGCTGATGAGC
CGCACCAGGGACAATTTCCA

Downstream 100 bases:

>100_bases
GGCGGCCCCGGGGCTGGAGGATTCGTCCAATGCAACTGCCGTGGCGACGGTCGTCGAGAATCTCCCAGCGCTCGACGCTG
TCCGACGAAATCCGCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSAADDSATGRIQPIKPPRFGFLRRTYAMLVKELIQLRRDRLTFAMIVVIPVMQLLLFGYAINTTPRHLPTAVLLQEDSD
LGRSILKALENTAYFDFVQEVQSVEQFDNLLLSGKVLFGVEIPRGFERAVRRGERPALLVAADATDPVAAGSALSALGRI
VQTALEHDRVAGDPGNPPFEIRAHARYNPAASSRLNIVPGLVGTILTMTMLIFTALSVTREIERGTMENLLSMPITPVEV
MLGKILPYVGVGFIQASLIIGIGVFLFGVPLRGSLLLLALLSTLFITTNLAIGYTFSTLVQNQLQAMQASMMFFLPSILL
SGFMFPFAGMPQWAQYLGECLPLTHYVRIVRAIMLKGSTLENLRYDTLALAALMLIAMTIAVTRFRRTLD

Sequences:

>Translated_390_residues
MSAADDSATGRIQPIKPPRFGFLRRTYAMLVKELIQLRRDRLTFAMIVVIPVMQLLLFGYAINTTPRHLPTAVLLQEDSD
LGRSILKALENTAYFDFVQEVQSVEQFDNLLLSGKVLFGVEIPRGFERAVRRGERPALLVAADATDPVAAGSALSALGRI
VQTALEHDRVAGDPGNPPFEIRAHARYNPAASSRLNIVPGLVGTILTMTMLIFTALSVTREIERGTMENLLSMPITPVEV
MLGKILPYVGVGFIQASLIIGIGVFLFGVPLRGSLLLLALLSTLFITTNLAIGYTFSTLVQNQLQAMQASMMFFLPSILL
SGFMFPFAGMPQWAQYLGECLPLTHYVRIVRAIMLKGSTLENLRYDTLALAALMLIAMTIAVTRFRRTLD
>Mature_389_residues
SAADDSATGRIQPIKPPRFGFLRRTYAMLVKELIQLRRDRLTFAMIVVIPVMQLLLFGYAINTTPRHLPTAVLLQEDSDL
GRSILKALENTAYFDFVQEVQSVEQFDNLLLSGKVLFGVEIPRGFERAVRRGERPALLVAADATDPVAAGSALSALGRIV
QTALEHDRVAGDPGNPPFEIRAHARYNPAASSRLNIVPGLVGTILTMTMLIFTALSVTREIERGTMENLLSMPITPVEVM
LGKILPYVGVGFIQASLIIGIGVFLFGVPLRGSLLLLALLSTLFITTNLAIGYTFSTLVQNQLQAMQASMMFFLPSILLS
GFMFPFAGMPQWAQYLGECLPLTHYVRIVRAIMLKGSTLENLRYDTLALAALMLIAMTIAVTRFRRTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=340, Percent_Identity=33.8235294117647, Blast_Score=177, Evalue=2e-45,
Organism=Escherichia coli, GI1787010, Length=365, Percent_Identity=26.8493150684932, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI48994943, Length=353, Percent_Identity=30.8781869688385, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI226510979, Length=382, Percent_Identity=30.1047120418848, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24650855, Length=402, Percent_Identity=23.8805970149254, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24650853, Length=402, Percent_Identity=23.8805970149254, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI85725260, Length=407, Percent_Identity=22.6044226044226, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI85725262, Length=404, Percent_Identity=22.7722772277228, Blast_Score=75, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42918; Mature: 42786

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAADDSATGRIQPIKPPRFGFLRRTYAMLVKELIQLRRDRLTFAMIVVIPVMQLLLFGY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AINTTPRHLPTAVLLQEDSDLGRSILKALENTAYFDFVQEVQSVEQFDNLLLSGKVLFGV
HHCCCCCCCCEEHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
EIPRGFERAVRRGERPALLVAADATDPVAAGSALSALGRIVQTALEHDRVAGDPGNPPFE
ECCCHHHHHHHCCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
IRAHARYNPAASSRLNIVPGLVGTILTMTMLIFTALSVTREIERGTMENLLSMPITPVEV
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
MLGKILPYVGVGFIQASLIIGIGVFLFGVPLRGSLLLLALLSTLFITTNLAIGYTFSTLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNQLQAMQASMMFFLPSILLSGFMFPFAGMPQWAQYLGECLPLTHYVRIVRAIMLKGSTL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ENLRYDTLALAALMLIAMTIAVTRFRRTLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAADDSATGRIQPIKPPRFGFLRRTYAMLVKELIQLRRDRLTFAMIVVIPVMQLLLFGY
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AINTTPRHLPTAVLLQEDSDLGRSILKALENTAYFDFVQEVQSVEQFDNLLLSGKVLFGV
HHCCCCCCCCEEHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
EIPRGFERAVRRGERPALLVAADATDPVAAGSALSALGRIVQTALEHDRVAGDPGNPPFE
ECCCHHHHHHHCCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
IRAHARYNPAASSRLNIVPGLVGTILTMTMLIFTALSVTREIERGTMENLLSMPITPVEV
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
MLGKILPYVGVGFIQASLIIGIGVFLFGVPLRGSLLLLALLSTLFITTNLAIGYTFSTLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNQLQAMQASMMFFLPSILLSGFMFPFAGMPQWAQYLGECLPLTHYVRIVRAIMLKGSTL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ENLRYDTLALAALMLIAMTIAVTRFRRTLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]