| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yecE [C]
Identifier: 86750769
GI number: 86750769
Start: 4200963
End: 4201766
Strand: Direct
Name: yecE [C]
Synonym: RPB_3659
Alternate gene names: 86750769
Gene position: 4200963-4201766 (Clockwise)
Preceding gene: 86750765
Following gene: 86750771
Centisome position: 78.79
GC content: 63.43
Gene sequence:
>804_bases ATGAAGAGCAAGTCAGGCAACATTCGCATCGGCATCGGCGGCTGGACCTACGAGCCGTGGCGCGGTGTGTTCTATCCGGA CAAGCTGCCGCAGCGGAAGGAACTGGAATACGCTGCCTCCAGGCTGACTTCGATCGAGATCAACGGCACCTTTTACGGCT CGCAAAAGCCGGAGAGCTTCCGTAAATGGGCGAGCGAAGTGCCCGACGGCTTCGTGTTCGCGCTGAAGGGGCCGCGCTTT GCGACCAACCGCAAGGTGCTTGCCGAGGCCGGAGACAGCGTCAAGCGGTTCTACGATTCCGGCGTGCTGGAGCTGGGTGA CCGGCTCGGTCCAGTGCTGTGGCAATTCGCGCCCACCAAGAAGTTCGACGAAGCTGATTTCGGCGCGTTTCTCGACCTGC TGCCGCGGACGATCGACGGCCGGGCGCTGCGCCACGTGGTCGAGGTGCGCCACGACAGTTTCTGCACCCCGGCGTTCATC GCGCTGTTACGGCAGCATGACATTCCGGTGGTTTATTCGGAGCACGCGATCTACCCGGAGATTGCCGATGTCGTCGGGGA CTTCGTGTACGCCCGGCTGCAGAAGGGCAAGGACGACATCGCGACCGGCTACCCGCCCAAGGCGCTCGCCGCCTGGGCGA AACGGTTCGAGACCTGGGCCGAGGGCGGCGAGCCGGATGACCTACCCAAGATCGGCGACGGCAAGGCGAAGAAACAGAAG CGCGACGTGTTCGCCTACGTCATTCATGAAGGCAAGGTCCGCGCGCCTGCGGCGGCGATGGAATTGATCAGGCTGGTCGG ATAG
Upstream 100 bases:
>100_bases CGTTCGGCTGCCCGCGCGTGGCTGTTGAGCCATCAGCACCGGCATCGCCGTTAGAACCAAGATAGGTGCGCAGTCGCCGT TTCGCAAGAGGGAGACCGGG
Downstream 100 bases:
>100_bases CTAGTTGATGCGCGGCGGCCGGAATTGGGTCGGCGACGCGCCGAACCGGCGGCGGAAGCTGTGGTTGAAGTGGGAGACGT CGCTGAAGCCGCAACTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKSKSGNIRIGIGGWTYEPWRGVFYPDKLPQRKELEYAASRLTSIEINGTFYGSQKPESFRKWASEVPDGFVFALKGPRF ATNRKVLAEAGDSVKRFYDSGVLELGDRLGPVLWQFAPTKKFDEADFGAFLDLLPRTIDGRALRHVVEVRHDSFCTPAFI ALLRQHDIPVVYSEHAIYPEIADVVGDFVYARLQKGKDDIATGYPPKALAAWAKRFETWAEGGEPDDLPKIGDGKAKKQK RDVFAYVIHEGKVRAPAAAMELIRLVG
Sequences:
>Translated_267_residues MKSKSGNIRIGIGGWTYEPWRGVFYPDKLPQRKELEYAASRLTSIEINGTFYGSQKPESFRKWASEVPDGFVFALKGPRF ATNRKVLAEAGDSVKRFYDSGVLELGDRLGPVLWQFAPTKKFDEADFGAFLDLLPRTIDGRALRHVVEVRHDSFCTPAFI ALLRQHDIPVVYSEHAIYPEIADVVGDFVYARLQKGKDDIATGYPPKALAAWAKRFETWAEGGEPDDLPKIGDGKAKKQK RDVFAYVIHEGKVRAPAAAMELIRLVG >Mature_267_residues MKSKSGNIRIGIGGWTYEPWRGVFYPDKLPQRKELEYAASRLTSIEINGTFYGSQKPESFRKWASEVPDGFVFALKGPRF ATNRKVLAEAGDSVKRFYDSGVLELGDRLGPVLWQFAPTKKFDEADFGAFLDLLPRTIDGRALRHVVEVRHDSFCTPAFI ALLRQHDIPVVYSEHAIYPEIADVVGDFVYARLQKGKDDIATGYPPKALAAWAKRFETWAEGGEPDDLPKIGDGKAKKQK RDVFAYVIHEGKVRAPAAAMELIRLVG
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29934; Mature: 29934
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKSGNIRIGIGGWTYEPWRGVFYPDKLPQRKELEYAASRLTSIEINGTFYGSQKPESF CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECEEECCCCCCHHH RKWASEVPDGFVFALKGPRFATNRKVLAEAGDSVKRFYDSGVLELGDRLGPVLWQFAPTK HHHHHHCCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCC KFDEADFGAFLDLLPRTIDGRALRHVVEVRHDSFCTPAFIALLRQHDIPVVYSEHAIYPE CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCCCHH IADVVGDFVYARLQKGKDDIATGYPPKALAAWAKRFETWAEGGEPDDLPKIGDGKAKKQK HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH RDVFAYVIHEGKVRAPAAAMELIRLVG HHHEEEEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKSKSGNIRIGIGGWTYEPWRGVFYPDKLPQRKELEYAASRLTSIEINGTFYGSQKPESF CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECEEECCCCCCHHH RKWASEVPDGFVFALKGPRFATNRKVLAEAGDSVKRFYDSGVLELGDRLGPVLWQFAPTK HHHHHHCCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCC KFDEADFGAFLDLLPRTIDGRALRHVVEVRHDSFCTPAFIALLRQHDIPVVYSEHAIYPE CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCCCHH IADVVGDFVYARLQKGKDDIATGYPPKALAAWAKRFETWAEGGEPDDLPKIGDGKAKKQK HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH RDVFAYVIHEGKVRAPAAAMELIRLVG HHHEEEEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA