| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750754
Identifier: 86750754
GI number: 86750754
Start: 4180417
End: 4180797
Strand: Reverse
Name: 86750754
Synonym: RPB_3644
Alternate gene names: NA
Gene position: 4180797-4180417 (Counterclockwise)
Preceding gene: 86750755
Following gene: 86750753
Centisome position: 78.41
GC content: 65.35
Gene sequence:
>381_bases ATGTTTGGGCGAGCGTGTAAGTCCAACGAGGAGAAGGTAGTGGCCGACAAGGACAACGACCCGGCCGCGGCCTGGCAAGC GATGTTCGGCGAGATGAGCAAGGGCTTCACGGCGCTCGCCAGTCAGGCGATGGCGACCCCGGAAATCGCCAAAGCGGTCG GCCAGGTCGGCGGCGCCACGGCGGAGGCGCAGAAACAGTTCGGCGAGATGGTTGAAAAATACCTGGCCGGTCTCAACCTG CCGACGCGCGCGCAGATGGACGAGTTCGGCGCGCGGCTCTCGGCAATCGAAGCCCGGCTCGATCAGCTCAAGGCAGCGGT CGATCAAGGGCGCAACGAGTCCGGCGACACCACGGCACCAAAGCCGACGCGCGCGAAATAG
Upstream 100 bases:
>100_bases GCCGCGCTGTGTGCGATCCATCGCGAGCGCAGCGGCGCCGACGCGACGGCCGCCGCGGCATGGATTGCGGATCTCGGCGC GCGCGATCGCTACGTGCTCG
Downstream 100 bases:
>100_bases GCGGCCGAGCTACATCCAAAAATTGCGAAATTTGTTTCGCGCACGCGGATTAGAGAATATTCATTAATCGGATCAACGAC TTAGGTGCAAGCTGAAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MFGRACKSNEEKVVADKDNDPAAAWQAMFGEMSKGFTALASQAMATPEIAKAVGQVGGATAEAQKQFGEMVEKYLAGLNL PTRAQMDEFGARLSAIEARLDQLKAAVDQGRNESGDTTAPKPTRAK
Sequences:
>Translated_126_residues MFGRACKSNEEKVVADKDNDPAAAWQAMFGEMSKGFTALASQAMATPEIAKAVGQVGGATAEAQKQFGEMVEKYLAGLNL PTRAQMDEFGARLSAIEARLDQLKAAVDQGRNESGDTTAPKPTRAK >Mature_126_residues MFGRACKSNEEKVVADKDNDPAAAWQAMFGEMSKGFTALASQAMATPEIAKAVGQVGGATAEAQKQFGEMVEKYLAGLNL PTRAQMDEFGARLSAIEARLDQLKAAVDQGRNESGDTTAPKPTRAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13366; Mature: 13366
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00318 HMG_COA_REDUCTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRACKSNEEKVVADKDNDPAAAWQAMFGEMSKGFTALASQAMATPEIAKAVGQVGGAT CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC AEAQKQFGEMVEKYLAGLNLPTRAQMDEFGARLSAIEARLDQLKAAVDQGRNESGDTTAP HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KPTRAK CCCCCC >Mature Secondary Structure MFGRACKSNEEKVVADKDNDPAAAWQAMFGEMSKGFTALASQAMATPEIAKAVGQVGGAT CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC AEAQKQFGEMVEKYLAGLNLPTRAQMDEFGARLSAIEARLDQLKAAVDQGRNESGDTTAP HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KPTRAK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA