| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fabG [H]
Identifier: 86750716
GI number: 86750716
Start: 4138137
End: 4138916
Strand: Direct
Name: fabG [H]
Synonym: RPB_3606
Alternate gene names: 86750716
Gene position: 4138137-4138916 (Clockwise)
Preceding gene: 86750712
Following gene: 86750717
Centisome position: 77.61
GC content: 67.95
Gene sequence:
>780_bases ATGAGCATTTTCGATCTGAACGGACGCGTCGCGGTCATCACAGGCGGCAATGGCGGCATCGGGCTCGGCATGGCGCAGGC GCTCGCCGCCGCCGGTTGCAACGTCTCGATCTGGGGCCGCAATCCCGAGAAGAACAAGGCGGCGGTGCAGAGCCTCGCCG GCGCGCGCGGCAAGGCCGAGGCGCAGATCTGCGACGTCACCGACCCCGCCTCGGTGAAGGCCGCGATGGAGGCGACGCTG AAAGCCTTCGGCCGTGTCGACGGCTGCTTCGCCAATGCCGGCATCGGCGGCGGCGGACGGCAGCCCTTCATCGAACGCAC CGAAGAGCAATGGCGCACGATGTTCGCCACCAATCTCGACGGCGTCTTCCACGCCTTCCAGGCCGCCGCGCGGCACATGA CCGACCGCGCCGCGAACGGCGATCCGTTCGGCCGGCTGGTCGCGACCTCGAGCCTCGCCTCGATCTTCGGCACCGCGCGC AACGAGCACTACGCCGCGACCAAGGCGGCGATCAACGCGCTGGTGCGCGCGCTCGCGGTCGAACTCGCTCGCAACGGCGT CACCGCCAATGCGATCCTGCCGGGCTGGATCAAGAGCGACATGACCGCGGGGATCATGGGCAACGACAAATTCGTCGCCA ACGTGATGCCGCGCATTCCGGTGCGCCGGTTCGGCGAGCCCGAGGATTTCGGCGGCATCGCGGTGTATCTGATGAGCAAG GCGTCGTCCTATCACACCGCCGACACCTTCGTGATCGACGGCGGCTACACCGCGTTCTGA
Upstream 100 bases:
>100_bases TTGATTTTTGCAGCGCGCTTGTCCATGGTCCGCCGACGATAACAGCGCGCATGCCGTTGCGAATGGTTTAGCGCGCGACA AACAAAAATGGAAACGCTGT
Downstream 100 bases:
>100_bases CGACCACGACCCATCAAAGAAGAAGACCATGGCCAGCCAACTCCCGCCCGAGCGCATTCCCGTCATCGCCGGAATCGGCG AAATCGCCGATCACCCCAAG
Product: oxoacyl carrier protein reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSIFDLNGRVAVITGGNGGIGLGMAQALAAAGCNVSIWGRNPEKNKAAVQSLAGARGKAEAQICDVTDPASVKAAMEATL KAFGRVDGCFANAGIGGGGRQPFIERTEEQWRTMFATNLDGVFHAFQAAARHMTDRAANGDPFGRLVATSSLASIFGTAR NEHYAATKAAINALVRALAVELARNGVTANAILPGWIKSDMTAGIMGNDKFVANVMPRIPVRRFGEPEDFGGIAVYLMSK ASSYHTADTFVIDGGYTAF
Sequences:
>Translated_259_residues MSIFDLNGRVAVITGGNGGIGLGMAQALAAAGCNVSIWGRNPEKNKAAVQSLAGARGKAEAQICDVTDPASVKAAMEATL KAFGRVDGCFANAGIGGGGRQPFIERTEEQWRTMFATNLDGVFHAFQAAARHMTDRAANGDPFGRLVATSSLASIFGTAR NEHYAATKAAINALVRALAVELARNGVTANAILPGWIKSDMTAGIMGNDKFVANVMPRIPVRRFGEPEDFGGIAVYLMSK ASSYHTADTFVIDGGYTAF >Mature_258_residues SIFDLNGRVAVITGGNGGIGLGMAQALAAAGCNVSIWGRNPEKNKAAVQSLAGARGKAEAQICDVTDPASVKAAMEATLK AFGRVDGCFANAGIGGGGRQPFIERTEEQWRTMFATNLDGVFHAFQAAARHMTDRAANGDPFGRLVATSSLASIFGTARN EHYAATKAAINALVRALAVELARNGVTANAILPGWIKSDMTAGIMGNDKFVANVMPRIPVRRFGEPEDFGGIAVYLMSKA SSYHTADTFVIDGGYTAF
Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=31.8548387096774, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=27.9527559055118, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI19923817, Length=261, Percent_Identity=27.9693486590038, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=27.5193798449612, Blast_Score=98, Evalue=7e-21, Organism=Homo sapiens, GI7705925, Length=258, Percent_Identity=30.6201550387597, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI5031737, Length=256, Percent_Identity=27.734375, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI10190704, Length=257, Percent_Identity=29.5719844357977, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI126723750, Length=254, Percent_Identity=26.3779527559055, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI59889578, Length=238, Percent_Identity=29.8319327731092, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI31542939, Length=207, Percent_Identity=30.9178743961353, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI4504505, Length=217, Percent_Identity=29.0322580645161, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI33667109, Length=201, Percent_Identity=27.363184079602, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI109715829, Length=247, Percent_Identity=25.1012145748988, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI209862901, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI19923983, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI223718074, Length=215, Percent_Identity=30.2325581395349, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI20149619, Length=210, Percent_Identity=27.1428571428571, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI224922801, Length=179, Percent_Identity=29.608938547486, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=35.1778656126482, Blast_Score=147, Evalue=8e-37, Organism=Escherichia coli, GI1789208, Length=258, Percent_Identity=31.3953488372093, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=32.0158102766798, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=35.1351351351351, Blast_Score=127, Evalue=9e-31, Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=29.718875502008, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI87082160, Length=259, Percent_Identity=30.5019305019305, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=29.2, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=31.3253012048193, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1789378, Length=258, Percent_Identity=29.4573643410853, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786812, Length=262, Percent_Identity=26.7175572519084, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI2367365, Length=254, Percent_Identity=27.1653543307087, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789057, Length=264, Percent_Identity=25, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787526, Length=248, Percent_Identity=27.8225806451613, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1786701, Length=217, Percent_Identity=30.8755760368664, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787545, Length=254, Percent_Identity=26.3779527559055, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=34.1269841269841, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17555706, Length=252, Percent_Identity=30.5555555555556, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=27.6679841897233, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=29.4339622641509, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=27.906976744186, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=27.6515151515151, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115534694, Length=259, Percent_Identity=27.4131274131274, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=28.6259541984733, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=26.8199233716475, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=28.0898876404494, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=28.6792452830189, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=28.9473684210526, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=27.0992366412214, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17531453, Length=271, Percent_Identity=28.0442804428044, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=28.2352941176471, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17568967, Length=243, Percent_Identity=30.4526748971193, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17538480, Length=266, Percent_Identity=26.3157894736842, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17538182, Length=255, Percent_Identity=27.0588235294118, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=28.4644194756554, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=26.7175572519084, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17562904, Length=269, Percent_Identity=26.7657992565056, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71994604, Length=258, Percent_Identity=28.2945736434109, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=26.9961977186312, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=25.0936329588015, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17536025, Length=261, Percent_Identity=26.0536398467433, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=24.8148148148148, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17560220, Length=271, Percent_Identity=26.1992619926199, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17561272, Length=256, Percent_Identity=28.90625, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17508895, Length=200, Percent_Identity=24.5, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17555612, Length=236, Percent_Identity=28.3898305084746, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17536651, Length=261, Percent_Identity=24.1379310344828, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=29.6875, Blast_Score=108, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6322861, Length=243, Percent_Identity=27.9835390946502, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=31.640625, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=30.46875, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24643142, Length=253, Percent_Identity=29.6442687747036, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI21355319, Length=257, Percent_Identity=26.4591439688716, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI24640492, Length=221, Percent_Identity=30.316742081448, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=29.5719844357977, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI18859837, Length=214, Percent_Identity=32.7102803738318, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=28.0155642023346, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=27.1317829457364, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571387, Length=204, Percent_Identity=29.9019607843137, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI116007236, Length=199, Percent_Identity=28.1407035175879, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24580925, Length=206, Percent_Identity=29.6116504854369, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27092; Mature: 26961
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFDLNGRVAVITGGNGGIGLGMAQALAAAGCNVSIWGRNPEKNKAAVQSLAGARGKAE CCEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCC AQICDVTDPASVKAAMEATLKAFGRVDGCFANAGIGGGGRQPFIERTEEQWRTMFATNLD EEEECCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCHH GVFHAFQAAARHMTDRAANGDPFGRLVATSSLASIFGTARNEHYAATKAAINALVRALAV HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ELARNGVTANAILPGWIKSDMTAGIMGNDKFVANVMPRIPVRRFGEPEDFGGIAVYLMSK HHHHCCCEECCCCCCHHHHCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCEEEEEECC ASSYHTADTFVIDGGYTAF CCCCCCCCEEEECCCCCCC >Mature Secondary Structure SIFDLNGRVAVITGGNGGIGLGMAQALAAAGCNVSIWGRNPEKNKAAVQSLAGARGKAE CEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCC AQICDVTDPASVKAAMEATLKAFGRVDGCFANAGIGGGGRQPFIERTEEQWRTMFATNLD EEEECCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCHH GVFHAFQAAARHMTDRAANGDPFGRLVATSSLASIFGTARNEHYAATKAAINALVRALAV HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ELARNGVTANAILPGWIKSDMTAGIMGNDKFVANVMPRIPVRRFGEPEDFGGIAVYLMSK HHHHCCCEECCCCCCHHHHCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCEEEEEECC ASSYHTADTFVIDGGYTAF CCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]