| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yeiH [C]
Identifier: 86750704
GI number: 86750704
Start: 4121747
End: 4122793
Strand: Direct
Name: yeiH [C]
Synonym: RPB_3594
Alternate gene names: 86750704
Gene position: 4121747-4122793 (Clockwise)
Preceding gene: 86750699
Following gene: 86750705
Centisome position: 77.31
GC content: 69.25
Gene sequence:
>1047_bases ATGACCTCGAACGCCAGAACCCATCAACCGCACCCCCGCATCGACCGGCACCTGGCCGCGATCCTGCCGGGCGTGGTGCT GACGGCCACGATCGCCGCCGCAGCTCTCGGGTTGCAGCGGATCCCCGCGCTCGCGGGCGTCAGTCCGATGCTGCTGGCGA TCCTGATCGGAATCGTCGCCCACAACGTCGTCGGGACGCCGGGATGGGCGCTGCCCGGGGTCAAATTCAGCGTTCGACGG GTGCTGCGCTTCGCCATCATCCTGCTCGGACTGCAGCTCACCGTCGCGCAACTGCTCGAGGTCGGCGGCGAAGGGCTGGC GATCATCGCCGCGACGCTGCTGGCGACCTTCAGCTTCACCGTGTGGCTCGGCCGCATGCTCGGTGTCGATCGCAAACTCG GCGAGCTGATCGCCGCCGGCACCTCGATCTGCGGCGCCTCCGCCATCATCGCCACCAACACCGTGACCCGCGCCGACGAC GAGGATGTCGCTTACGGCGTCGCCTGCGTCACGGTATTCGGGTCGCTGGCGATGGTCGGTACGCCACTGCTCCAGAACGC GTTCGGTCTCGACGCCCACGGCTTCGGGCTGTGGACCGGCGCCTCGATCCACGAGATCGCCCAGGTCGTCGCCGCGAGCT TCCAGGGCGGGCACGATGCCGGCGAGTTCGGCACCATCGCCAAGCTGTCGCGGGTGATGATGCTGGCGCCGCTGGTGATC GGTCTCGGCATGCTGGCGCGGGCCCGTGCGCGGCACGAGCCTTCGGCCGCCGGCACCGCTGCGCCGCCGATGCCGTGGTT CGTGCTCGGCTTCGTGGCGATGGTCGGCGTCAACCAGCTGATCGCCATCCCGCAGGACGTCAAAGCCCCGATCGTCGCCG CCACCGCCTTCCTGCTGTCGATGGCGCTGGCGGCGATGGGGCTCGAGACGGATCTGCGCAAGCTCGCCGCGCGCGGCCTG CGTCCGGCCTTGCTCGGCCTGTGCGCGGCCTTGTTCATCTCGGGCTTCTCGCTGAGCCTGATCAAACTCACAGGATGGCA TGGATGA
Upstream 100 bases:
>100_bases GGCGATTATTTAATCAGTAAAATCGATTGATATAACGATTATAATCTGTTTGATTGATTGATCATCGCGCGATCGAATGG GCCGGAAAAGGAGCCTGCCC
Downstream 100 bases:
>100_bases CCCTGGAACAGCTCCGCATCTTCATCGCGGTCGCCGAACAGCAACACATGACCCGCGCCGCGAGCGGACTGAACCTCACC CAATCGGCCACCAGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTSNARTHQPHPRIDRHLAAILPGVVLTATIAAAALGLQRIPALAGVSPMLLAILIGIVAHNVVGTPGWALPGVKFSVRR VLRFAIILLGLQLTVAQLLEVGGEGLAIIAATLLATFSFTVWLGRMLGVDRKLGELIAAGTSICGASAIIATNTVTRADD EDVAYGVACVTVFGSLAMVGTPLLQNAFGLDAHGFGLWTGASIHEIAQVVAASFQGGHDAGEFGTIAKLSRVMMLAPLVI GLGMLARARARHEPSAAGTAAPPMPWFVLGFVAMVGVNQLIAIPQDVKAPIVAATAFLLSMALAAMGLETDLRKLAARGL RPALLGLCAALFISGFSLSLIKLTGWHG
Sequences:
>Translated_348_residues MTSNARTHQPHPRIDRHLAAILPGVVLTATIAAAALGLQRIPALAGVSPMLLAILIGIVAHNVVGTPGWALPGVKFSVRR VLRFAIILLGLQLTVAQLLEVGGEGLAIIAATLLATFSFTVWLGRMLGVDRKLGELIAAGTSICGASAIIATNTVTRADD EDVAYGVACVTVFGSLAMVGTPLLQNAFGLDAHGFGLWTGASIHEIAQVVAASFQGGHDAGEFGTIAKLSRVMMLAPLVI GLGMLARARARHEPSAAGTAAPPMPWFVLGFVAMVGVNQLIAIPQDVKAPIVAATAFLLSMALAAMGLETDLRKLAARGL RPALLGLCAALFISGFSLSLIKLTGWHG >Mature_347_residues TSNARTHQPHPRIDRHLAAILPGVVLTATIAAAALGLQRIPALAGVSPMLLAILIGIVAHNVVGTPGWALPGVKFSVRRV LRFAIILLGLQLTVAQLLEVGGEGLAIIAATLLATFSFTVWLGRMLGVDRKLGELIAAGTSICGASAIIATNTVTRADDE DVAYGVACVTVFGSLAMVGTPLLQNAFGLDAHGFGLWTGASIHEIAQVVAASFQGGHDAGEFGTIAKLSRVMMLAPLVIG LGMLARARARHEPSAAGTAAPPMPWFVLGFVAMVGVNQLIAIPQDVKAPIVAATAFLLSMALAAMGLETDLRKLAARGLR PALLGLCAALFISGFSLSLIKLTGWHG
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=334, Percent_Identity=36.8263473053892, Blast_Score=169, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 35899; Mature: 35768
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNARTHQPHPRIDRHLAAILPGVVLTATIAAAALGLQRIPALAGVSPMLLAILIGIVA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH HNVVGTPGWALPGVKFSVRRVLRFAIILLGLQLTVAQLLEVGGEGLAIIAATLLATFSFT HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VWLGRMLGVDRKLGELIAAGTSICGASAIIATNTVTRADDEDVAYGVACVTVFGSLAMVG HHHHHHHCCHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TPLLQNAFGLDAHGFGLWTGASIHEIAQVVAASFQGGHDAGEFGTIAKLSRVMMLAPLVI HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH GLGMLARARARHEPSAAGTAAPPMPWFVLGFVAMVGVNQLIAIPQDVKAPIVAATAFLLS HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MALAAMGLETDLRKLAARGLRPALLGLCAALFISGFSLSLIKLTGWHG HHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCC >Mature Secondary Structure TSNARTHQPHPRIDRHLAAILPGVVLTATIAAAALGLQRIPALAGVSPMLLAILIGIVA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH HNVVGTPGWALPGVKFSVRRVLRFAIILLGLQLTVAQLLEVGGEGLAIIAATLLATFSFT HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VWLGRMLGVDRKLGELIAAGTSICGASAIIATNTVTRADDEDVAYGVACVTVFGSLAMVG HHHHHHHCCHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TPLLQNAFGLDAHGFGLWTGASIHEIAQVVAASFQGGHDAGEFGTIAKLSRVMMLAPLVI HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH GLGMLARARARHEPSAAGTAAPPMPWFVLGFVAMVGVNQLIAIPQDVKAPIVAATAFLLS HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MALAAMGLETDLRKLAARGLRPALLGLCAALFISGFSLSLIKLTGWHG HHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA