| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86750694
Identifier: 86750694
GI number: 86750694
Start: 4108976
End: 4109413
Strand: Direct
Name: 86750694
Synonym: RPB_3584
Alternate gene names: NA
Gene position: 4108976-4109413 (Clockwise)
Preceding gene: 86750693
Following gene: 86750697
Centisome position: 77.07
GC content: 70.32
Gene sequence:
>438_bases ATGACCGAATCCGACCACACCGAAACGCCCGACATCCCCGCGGGCTTCACCCGCCACACCCGGCCGAGCCCCCTCACCGC GCCGTGGGAGCCGCTCTATGCGAGGACCACGGTGGATGCGGTGATGCTCGGCCTGCGCATCCGCGACGCCCACACCAATT CGCGCGGCCTCGCCCATGGCGGACTGATCGCCGCGCTCGCTGACGCCGCGATGGGCTACAGCTGCGCGCTCAAGCTCGGC GGCGGCGAGCGGCTGCTCACCGCCTCGCTGGCGATCGACTTCCTCGGCTCGGCGAAGATCGGGCAATGGCTGCAGATCGA GCCCGAGGTGGTCAAGCTCGGTGGGTCGCTGTGCGTGGTGCAGTGCTTCGTCATCGCCGACGGCGCCCGCTGCGCTCGCG CCAACGCCACCTTCAGCGTCGCGAAGGCGAAGGTCTAG
Upstream 100 bases:
>100_bases GCCGTTTCAAACACCCTCTCAAACCGCGCTTCAAACTTTGTCGGCGTTGCGGCAGCGACGCGCGTGCGGTCAAATGCGCA GGTTCAACGCGAGCGCTTGC
Downstream 100 bases:
>100_bases TTCGCGCTTCCACGAACATAGCGTTCGTCATTCCGGGGCGCTCACGAAGTGAGCGAACCCGGAATCCCGAGGTGCCCTGA ACGTCTGGATTCCGGGTTCA
Product: phenylacetic acid degradation-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTESDHTETPDIPAGFTRHTRPSPLTAPWEPLYARTTVDAVMLGLRIRDAHTNSRGLAHGGLIAALADAAMGYSCALKLG GGERLLTASLAIDFLGSAKIGQWLQIEPEVVKLGGSLCVVQCFVIADGARCARANATFSVAKAKV
Sequences:
>Translated_145_residues MTESDHTETPDIPAGFTRHTRPSPLTAPWEPLYARTTVDAVMLGLRIRDAHTNSRGLAHGGLIAALADAAMGYSCALKLG GGERLLTASLAIDFLGSAKIGQWLQIEPEVVKLGGSLCVVQCFVIADGARCARANATFSVAKAKV >Mature_144_residues TESDHTETPDIPAGFTRHTRPSPLTAPWEPLYARTTVDAVMLGLRIRDAHTNSRGLAHGGLIAALADAAMGYSCALKLGG GERLLTASLAIDFLGSAKIGQWLQIEPEVVKLGGSLCVVQCFVIADGARCARANATFSVAKAKV
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioesterase PaaI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 15246; Mature: 15115
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESDHTETPDIPAGFTRHTRPSPLTAPWEPLYARTTVDAVMLGLRIRDAHTNSRGLAHG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCC GLIAALADAAMGYSCALKLGGGERLLTASLAIDFLGSAKIGQWLQIEPEVVKLGGSLCVV HHHHHHHHHHCCEEEEEEECCCCEEEEHHHHHHHCCCCCCCCEEEECHHHEECCCCEEEE QCFVIADGARCARANATFSVAKAKV EEEEEECCCCEECCCCEEEEEEECC >Mature Secondary Structure TESDHTETPDIPAGFTRHTRPSPLTAPWEPLYARTTVDAVMLGLRIRDAHTNSRGLAHG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCC GLIAALADAAMGYSCALKLGGGERLLTASLAIDFLGSAKIGQWLQIEPEVVKLGGSLCVV HHHHHHHHHHCCEEEEEEECCCCEEEEHHHHHHHCCCCCCCCEEEECHHHEECCCCEEEE QCFVIADGARCARANATFSVAKAKV EEEEEECCCCEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]