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The map label for this gene is frc [H]

Identifier: 86750672

GI number: 86750672

Start: 4078477

End: 4079874

Strand: Reverse

Name: frc [H]

Synonym: RPB_3562

Alternate gene names: 86750672

Gene position: 4079874-4078477 (Counterclockwise)

Preceding gene: 86750673

Following gene: 86750671

Centisome position: 76.52

GC content: 70.31

Gene sequence:

>1398_bases
ATGCCATCTCCCCGCGATCTGCTCGCTGACCTGTGGACCTCCGTCGGCGGCGATGCTGCCGCGCTCGACGCCGTCACGCT
CACCGGCGACGAGCCGCAATTGCCGTCGTCGTTCCGGGTCGATGCGGCGGCGCAAGTGTCGATCGCCGCGAGCGGGCTCG
CTGCGGCAGAGATCTGGCGGATGCGCAGCGGGCAGACACAGCGCGTCAGCGTCGACATGCGCCATGCCGCGATCGAGTGC
CGCTCCGAGCGCTATCTGCGCCGCGACGGCGAACCGCCGCCGCCGATGTGGGATCCGATCGCCGGCGTGTATCAGGTGAG
GGGTGGCCGCTATGTCCGGTTGCACACCAACTTTCCGCATCATCGCGACGCGGTCTGCAACGTCTTGCCGTGCGACGCGA
CGCGCGAGGCGGTGCAGGCGGCGCTGCTGCAATGGGACGGCGAAACGTTCGAGACCGCGGCCTACGACGCCGGCGGCGTG
GTGGCGCTGATGCGGTCGCGCGATGAATGGCAGGCGCTGCCTCAGGCGTCGGCGCTGGATGCGCTGCCGCTGGTCGAGAT
CAGCAAGATCGGCGAGGCGGCGCCGAAGCCGTGGCCGGCTGGTGAGCGGCCGCTCGCGGGACTGCGCGTGCTCGATCTGT
CGCGCGTCATCGCCGGACCCGTCGCCGGCCGGACGCTGGCGGCGCACGGCGCCGACGTGATGCTGGTATCAAGTCCCAGG
CTGCCGTCGATCCCGTGGCTGGTGATCGACACCGGCCGCGGCAAGCTGTCGAGCTACGCCGACCTGACGACGCCACAGGG
GCACGCGGCGTTGCGCGAACTGCTGAGCGAGGCCGACATCTTCTCACAGGGCTATCGCCCGCAATCTTTGGCTGCGCTCG
GCTTCTCGCCGGAGGAGGCCGCCGCCATCAATCCGGGTATCGTCTATGTGTCGCTCTCCGCCTATGGCCGCAACGGGCCG
TGGGCGACGCGGCGCGGGTTCGATTCGCTGGTGCAATGCGCCACCGGATTCAACCATGCCGAAGCGCAGGCGGCCGGGGT
CGAGGGGCCGAAGGAATTGCCGATGCAGATCCTCGACCATGCCACCGGCTATCTGATGGCGTTCGGCGCGATGATCGCCA
GGGCGCGGCAGGCGCGCGAAGGCGGCAGCTGGCACGTCCAACTGTCGCTCGCCCGCACCGGCAAATGGCTGTGGGAGATG
GGGCGATTGGCGCAAGGCCTCGCCACGCCGGACATCACGCCCGATCTGGCGGCTTCGTATATCGAGGATCTGCCGTCCGG
CTTCGGGCGACTCACGGCCGTGCGCCACGCCGCGATGCTGTCCGAGACGCCGGCGCATTGGGCGCGACCCGCGGTGCCGC
TCGGCACCGATCCACCAGGCTGGCCCGCCCGGGGCTGA

Upstream 100 bases:

>100_bases
CGAAGACGATGGATACGCGGGTCAAGCCCGCGTATGACGCTGACAGTGTGGTGAGCGGTCGTCTCAGCGTCGCCCTCAAC
AAGCCGGAAGAAATCACACG

Downstream 100 bases:

>100_bases
CGGCGAGGCGGTGACCGGTCTGGGACATCTCGAGGGTTGCGCGGGAGTAATCGATCAACCGAACCCCGGCTGCTGCTCAC
TATTGACGGAGATTGTCGGC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MPSPRDLLADLWTSVGGDAAALDAVTLTGDEPQLPSSFRVDAAAQVSIAASGLAAAEIWRMRSGQTQRVSVDMRHAAIEC
RSERYLRRDGEPPPPMWDPIAGVYQVRGGRYVRLHTNFPHHRDAVCNVLPCDATREAVQAALLQWDGETFETAAYDAGGV
VALMRSRDEWQALPQASALDALPLVEISKIGEAAPKPWPAGERPLAGLRVLDLSRVIAGPVAGRTLAAHGADVMLVSSPR
LPSIPWLVIDTGRGKLSSYADLTTPQGHAALRELLSEADIFSQGYRPQSLAALGFSPEEAAAINPGIVYVSLSAYGRNGP
WATRRGFDSLVQCATGFNHAEAQAAGVEGPKELPMQILDHATGYLMAFGAMIARARQAREGGSWHVQLSLARTGKWLWEM
GRLAQGLATPDITPDLAASYIEDLPSGFGRLTAVRHAAMLSETPAHWARPAVPLGTDPPGWPARG

Sequences:

>Translated_465_residues
MPSPRDLLADLWTSVGGDAAALDAVTLTGDEPQLPSSFRVDAAAQVSIAASGLAAAEIWRMRSGQTQRVSVDMRHAAIEC
RSERYLRRDGEPPPPMWDPIAGVYQVRGGRYVRLHTNFPHHRDAVCNVLPCDATREAVQAALLQWDGETFETAAYDAGGV
VALMRSRDEWQALPQASALDALPLVEISKIGEAAPKPWPAGERPLAGLRVLDLSRVIAGPVAGRTLAAHGADVMLVSSPR
LPSIPWLVIDTGRGKLSSYADLTTPQGHAALRELLSEADIFSQGYRPQSLAALGFSPEEAAAINPGIVYVSLSAYGRNGP
WATRRGFDSLVQCATGFNHAEAQAAGVEGPKELPMQILDHATGYLMAFGAMIARARQAREGGSWHVQLSLARTGKWLWEM
GRLAQGLATPDITPDLAASYIEDLPSGFGRLTAVRHAAMLSETPAHWARPAVPLGTDPPGWPARG
>Mature_464_residues
PSPRDLLADLWTSVGGDAAALDAVTLTGDEPQLPSSFRVDAAAQVSIAASGLAAAEIWRMRSGQTQRVSVDMRHAAIECR
SERYLRRDGEPPPPMWDPIAGVYQVRGGRYVRLHTNFPHHRDAVCNVLPCDATREAVQAALLQWDGETFETAAYDAGGVV
ALMRSRDEWQALPQASALDALPLVEISKIGEAAPKPWPAGERPLAGLRVLDLSRVIAGPVAGRTLAAHGADVMLVSSPRL
PSIPWLVIDTGRGKLSSYADLTTPQGHAALRELLSEADIFSQGYRPQSLAALGFSPEEAAAINPGIVYVSLSAYGRNGPW
ATRRGFDSLVQCATGFNHAEAQAAGVEGPKELPMQILDHATGYLMAFGAMIARARQAREGGSWHVQLSLARTGKWLWEMG
RLAQGLATPDITPDLAASYIEDLPSGFGRLTAVRHAAMLSETPAHWARPAVPLGTDPPGWPARG

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=193, Percent_Identity=32.1243523316062, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI300863124, Length=193, Percent_Identity=32.1243523316062, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI300863126, Length=149, Percent_Identity=32.8859060402685, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI42794625, Length=206, Percent_Identity=29.6116504854369, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI266456254, Length=206, Percent_Identity=29.6116504854369, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI266458397, Length=206, Percent_Identity=29.6116504854369, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI266458393, Length=206, Percent_Identity=29.6116504854369, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI87082093, Length=147, Percent_Identity=29.2517006802721, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788717, Length=145, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24648431, Length=188, Percent_Identity=31.9148936170213, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24585488, Length=207, Percent_Identity=29.4685990338164, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 49766; Mature: 49635

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPRDLLADLWTSVGGDAAALDAVTLTGDEPQLPSSFRVDAAAQVSIAASGLAAAEIWR
CCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHH
MRSGQTQRVSVDMRHAAIECRSERYLRRDGEPPPPMWDPIAGVYQVRGGRYVRLHTNFPH
HCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEECCCEEEEEECCCCC
HRDAVCNVLPCDATREAVQAALLQWDGETFETAAYDAGGVVALMRSRDEWQALPQASALD
CHHHHCEECCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCHHHHHCCCCHHHC
ALPLVEISKIGEAAPKPWPAGERPLAGLRVLDLSRVIAGPVAGRTLAAHGADVMLVSSPR
CCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEEEEECCC
LPSIPWLVIDTGRGKLSSYADLTTPQGHAALRELLSEADIFSQGYRPQSLAALGFSPEEA
CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCHHH
AAINPGIVYVSLSAYGRNGPWATRRGFDSLVQCATGFNHAEAQAAGVEGPKELPMQILDH
CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHH
ATGYLMAFGAMIARARQAREGGSWHVQLSLARTGKWLWEMGRLAQGLATPDITPDLAASY
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCHHHHHHHHHHHHCCCCCCCHHHHHHH
IEDLPSGFGRLTAVRHAAMLSETPAHWARPAVPLGTDPPGWPARG
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSPRDLLADLWTSVGGDAAALDAVTLTGDEPQLPSSFRVDAAAQVSIAASGLAAAEIWR
CCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHH
MRSGQTQRVSVDMRHAAIECRSERYLRRDGEPPPPMWDPIAGVYQVRGGRYVRLHTNFPH
HCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEECCCEEEEEECCCCC
HRDAVCNVLPCDATREAVQAALLQWDGETFETAAYDAGGVVALMRSRDEWQALPQASALD
CHHHHCEECCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCHHHHHCCCCHHHC
ALPLVEISKIGEAAPKPWPAGERPLAGLRVLDLSRVIAGPVAGRTLAAHGADVMLVSSPR
CCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEEEEECCC
LPSIPWLVIDTGRGKLSSYADLTTPQGHAALRELLSEADIFSQGYRPQSLAALGFSPEEA
CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCHHH
AAINPGIVYVSLSAYGRNGPWATRRGFDSLVQCATGFNHAEAQAAGVEGPKELPMQILDH
CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHH
ATGYLMAFGAMIARARQAREGGSWHVQLSLARTGKWLWEMGRLAQGLATPDITPDLAASY
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCHHHHHHHHHHHHCCCCCCCHHHHHHH
IEDLPSGFGRLTAVRHAAMLSETPAHWARPAVPLGTDPPGWPARG
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA