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The map label for this gene is 86750618

Identifier: 86750618

GI number: 86750618

Start: 4016499

End: 4017062

Strand: Direct

Name: 86750618

Synonym: RPB_3508

Alternate gene names: NA

Gene position: 4016499-4017062 (Clockwise)

Preceding gene: 86750617

Following gene: 86750620

Centisome position: 75.33

GC content: 67.2

Gene sequence:

>564_bases
ATGATCCGCTTCATCACCACCGTCATCGCCGGCATCGTGCTCGGCGGCATCGTGCATCTGGTCAGCGTGCTAGCGCTGCC
GCGGATCGCCAGCCAGGACGCCTATGCGCGGCTGGCGCCGCTGACCAGGGTCAACGAGGTCTCGCAACTGCCGCCGACCA
CGCCCGACAATGCGCCGCTGCCGTTCCTCGATCCGGCCTTCGCCGTCGCGGTGTGCCGCTACGATCTGTCGAACGGCCCG
ATCAAGCTGACCGTGCCGGTCAGCCAGGCCTATACGGCGGTGTCGTTCTACACCCGCAACGAAGTCGCCTACTACGCGAT
CAACGACCGCTCCGCCGGCCGCAAGGTGATCGAACTCGATCTGATGACCGCCGAGCAGCACGGCAACCTGCCCGAAGACG
AAGACGTCACCGCCGCCGACCGCCTGATCATCGACTCCCCGACCACCACCGGCCTGATCGTGATGAAGGCGCTGGCCTCC
GAACCCGGCATGATGCCGCAAGCGAGAGCCGCGCTGGGCTCGGCAAGCTGCAAGCCGCAGCCGGAACCGGGGGCGAAGTC
GTAG

Upstream 100 bases:

>100_bases
GCTATATGCTGGTGCTGCGGCTGTACGACACGCCGGTCGGCGTCGCCACCCGCACCCAGCGCGACGCGCCGATGCCGTCG
ATCGCCACCATGGGCTGCCC

Downstream 100 bases:

>100_bases
TGATCAGCTCATAGCCTTGTAGGGTGGGCAAAGCGCAGCGTGCCCACGCGCTGACCGACAACGAGAGCCTTTCTGCTCTG
ATGGAATCAGAGCTCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MIRFITTVIAGIVLGGIVHLVSVLALPRIASQDAYARLAPLTRVNEVSQLPPTTPDNAPLPFLDPAFAVAVCRYDLSNGP
IKLTVPVSQAYTAVSFYTRNEVAYYAINDRSAGRKVIELDLMTAEQHGNLPEDEDVTAADRLIIDSPTTTGLIVMKALAS
EPGMMPQARAALGSASCKPQPEPGAKS

Sequences:

>Translated_187_residues
MIRFITTVIAGIVLGGIVHLVSVLALPRIASQDAYARLAPLTRVNEVSQLPPTTPDNAPLPFLDPAFAVAVCRYDLSNGP
IKLTVPVSQAYTAVSFYTRNEVAYYAINDRSAGRKVIELDLMTAEQHGNLPEDEDVTAADRLIIDSPTTTGLIVMKALAS
EPGMMPQARAALGSASCKPQPEPGAKS
>Mature_187_residues
MIRFITTVIAGIVLGGIVHLVSVLALPRIASQDAYARLAPLTRVNEVSQLPPTTPDNAPLPFLDPAFAVAVCRYDLSNGP
IKLTVPVSQAYTAVSFYTRNEVAYYAINDRSAGRKVIELDLMTAEQHGNLPEDEDVTAADRLIIDSPTTTGLIVMKALAS
EPGMMPQARAALGSASCKPQPEPGAKS

Specific function: Unknown

COG id: COG5436

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19901; Mature: 19901

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFITTVIAGIVLGGIVHLVSVLALPRIASQDAYARLAPLTRVNEVSQLPPTTPDNAPL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PFLDPAFAVAVCRYDLSNGPIKLTVPVSQAYTAVSFYTRNEVAYYAINDRSAGRKVIELD
CCCCHHHHHHHHHHCCCCCCEEEEEEHHHHEEEEEEEECCCEEEEEECCCCCCCEEEEEE
LMTAEQHGNLPEDEDVTAADRLIIDSPTTTGLIVMKALASEPGMMPQARAALGSASCKPQ
EEEHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCC
PEPGAKS
CCCCCCC
>Mature Secondary Structure
MIRFITTVIAGIVLGGIVHLVSVLALPRIASQDAYARLAPLTRVNEVSQLPPTTPDNAPL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PFLDPAFAVAVCRYDLSNGPIKLTVPVSQAYTAVSFYTRNEVAYYAINDRSAGRKVIELD
CCCCHHHHHHHHHHCCCCCCEEEEEEHHHHEEEEEEEECCCEEEEEECCCCCCCEEEEEE
LMTAEQHGNLPEDEDVTAADRLIIDSPTTTGLIVMKALASEPGMMPQARAALGSASCKPQ
EEEHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCC
PEPGAKS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA