| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is yusP [H]
Identifier: 86750606
GI number: 86750606
Start: 4000359
End: 4001954
Strand: Reverse
Name: yusP [H]
Synonym: RPB_3496
Alternate gene names: 86750606
Gene position: 4001954-4000359 (Counterclockwise)
Preceding gene: 86750608
Following gene: 86750605
Centisome position: 75.06
GC content: 69.36
Gene sequence:
>1596_bases ATGAGCATGTCCGAACACCGACGCCGTGAGCCGTCCGGCAGGCAATTGTTGTCCGACGAAGCGGCGGCGGAACTGTCGCA CATTCCCACCGAAGTGATCGATCTCGGCGACGCGCCGCCGCTGGCGCCGGCGAATACGCTGTCGCAGGGCGAAGTCCGCG CCATCCTGATGAGTCTGCTGCTGGCGATGTTCCTCGCCGCGCTCGACCAGACCATCGTCGCCACCGCGCTGCCGACGATC GGGCGGCAGTTCGGCGACGTCGAGAATCTGTCCTGGGTGATCACCGCTTATCTGTTGTCGTCGACCGCGGTGGCGCCGGT GTTCGGCAGCCTCGCCGACATTTACGGCCGCCGCGCCACCATCATCGCGTCGATCAGCCTGTTCATCGCCGGTTCAGTGA TGTGCGCGCTGGCGCCGAGCCTGCTGGTGCTGATTCTCGGTCGCGCGCTGCAGGGGCTGGGCGGCGGCGGCATCATGCCG ATCGTGCAGACGGTGATCTCGGACGTGGTGACGCCGCGCGAGCGCGGCAAGTATCAGGCCTATTTCTCCGCCGTCTGGGT CTCGGCCGGGATCGGCGGGCCGATCCTCGGCGGCGCCTTCGCCGAGCATCTGCACTGGTCGATGATCTTCTGGATCAATC TGCCGCTGGCGATCGGCGCGCTGGCGTTGCTGCTGCCGAAGATGGCCAAGATTCCGACGTATCACCGCCGCCGCAAGGTC GACTGGCTGGGCGGCGTGCTGCTGATGGCCTCGGCGATGGCGGTGATGCTGGCGCTGACCTGGGGCGGCACGCGGTTCTC CTGGCTGTCGCCGACGATCCTGGCGCTGAGCGGCGGCGCAGTGCTGCTCGCGGTGTGCTTCGTCTGGCACGCGCTGCGGG CGCCCGAGCCGTTCCTGCCGCTGCAATTGATGGGCGGCACGGTGGTGCCGTGGGCGATGGCGGCGGGCGGCTTCGCGATG GGAGCGATGATCGGCCTGACGGTGCACATGCCGCTGTACTACGAGGCGGTGTATCACCTGACCGCGAGCCAGTCCGGCCT GGCGCTGATCCCGATCGCCGCGGTGTCGGTGCTCGGCGCGGCGTTCACCGGCCGCGCTATGGTGAAGGTCGAGCGCTACA AGCGGATCGCGATCCTCGGCACCGGCTTCTCGGCGCTGATGGCGGCGGCGATCGCGGTGACGACGCCGCTGCCGCTGTGG CTGTTCCTGGCGCTGCTGTCGCTGTTCTCGATCGGGCTCGGCACGGTGTTCCCGGTCACCGTGGTGTCGATCCAGAACGC GGTGGCGCGGCCGCAGATCGGCACCGCGACCGGGGCGATGAACTTCTTCCGCGCGCTGATGGCGTCGTTCACGGTGGCGG CGTTCACCGCGGTGCTGCTGATCGCGTTCGGCGGCGAGATCCAGCTCGGCGGCGCCGAGCATCGCCACGCCATCGGCACG GTCGCTGCCGCCGACATGGTGGCGGCGTTCCGCTGGGTGTTCGCCGCGGCCGCCGCGATGCTGGCCGCGTCGGCGATCTG CGTGGCGATCATGGAAGAGCGCACGCTCGCCGGTCCGGAGCAGACTTCGCCGCCGCCGCTGGAGATGGCCGAGTAG
Upstream 100 bases:
>100_bases ACCCATGCGCCGAAGCCGCTGTCTTGGGCGGATTTGATGCGCTATTGAACTTCAATAGCGAATTCCCCCCGATGCCAGCC CGACGAGATTCCGCGACCGC
Downstream 100 bases:
>100_bases GACGGCGCCTGGCCCGGCGCCTGCGCCGCGGACGTCCGATCGCGATCCATTTTACGGAATTTCGACACCTTCCCGCGGAA ATTGACTAGTCTGCCGCAGA
Product: MFS transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MSMSEHRRREPSGRQLLSDEAAAELSHIPTEVIDLGDAPPLAPANTLSQGEVRAILMSLLLAMFLAALDQTIVATALPTI GRQFGDVENLSWVITAYLLSSTAVAPVFGSLADIYGRRATIIASISLFIAGSVMCALAPSLLVLILGRALQGLGGGGIMP IVQTVISDVVTPRERGKYQAYFSAVWVSAGIGGPILGGAFAEHLHWSMIFWINLPLAIGALALLLPKMAKIPTYHRRRKV DWLGGVLLMASAMAVMLALTWGGTRFSWLSPTILALSGGAVLLAVCFVWHALRAPEPFLPLQLMGGTVVPWAMAAGGFAM GAMIGLTVHMPLYYEAVYHLTASQSGLALIPIAAVSVLGAAFTGRAMVKVERYKRIAILGTGFSALMAAAIAVTTPLPLW LFLALLSLFSIGLGTVFPVTVVSIQNAVARPQIGTATGAMNFFRALMASFTVAAFTAVLLIAFGGEIQLGGAEHRHAIGT VAAADMVAAFRWVFAAAAAMLAASAICVAIMEERTLAGPEQTSPPPLEMAE
Sequences:
>Translated_531_residues MSMSEHRRREPSGRQLLSDEAAAELSHIPTEVIDLGDAPPLAPANTLSQGEVRAILMSLLLAMFLAALDQTIVATALPTI GRQFGDVENLSWVITAYLLSSTAVAPVFGSLADIYGRRATIIASISLFIAGSVMCALAPSLLVLILGRALQGLGGGGIMP IVQTVISDVVTPRERGKYQAYFSAVWVSAGIGGPILGGAFAEHLHWSMIFWINLPLAIGALALLLPKMAKIPTYHRRRKV DWLGGVLLMASAMAVMLALTWGGTRFSWLSPTILALSGGAVLLAVCFVWHALRAPEPFLPLQLMGGTVVPWAMAAGGFAM GAMIGLTVHMPLYYEAVYHLTASQSGLALIPIAAVSVLGAAFTGRAMVKVERYKRIAILGTGFSALMAAAIAVTTPLPLW LFLALLSLFSIGLGTVFPVTVVSIQNAVARPQIGTATGAMNFFRALMASFTVAAFTAVLLIAFGGEIQLGGAEHRHAIGT VAAADMVAAFRWVFAAAAAMLAASAICVAIMEERTLAGPEQTSPPPLEMAE >Mature_530_residues SMSEHRRREPSGRQLLSDEAAAELSHIPTEVIDLGDAPPLAPANTLSQGEVRAILMSLLLAMFLAALDQTIVATALPTIG RQFGDVENLSWVITAYLLSSTAVAPVFGSLADIYGRRATIIASISLFIAGSVMCALAPSLLVLILGRALQGLGGGGIMPI VQTVISDVVTPRERGKYQAYFSAVWVSAGIGGPILGGAFAEHLHWSMIFWINLPLAIGALALLLPKMAKIPTYHRRRKVD WLGGVLLMASAMAVMLALTWGGTRFSWLSPTILALSGGAVLLAVCFVWHALRAPEPFLPLQLMGGTVVPWAMAAGGFAMG AMIGLTVHMPLYYEAVYHLTASQSGLALIPIAAVSVLGAAFTGRAMVKVERYKRIAILGTGFSALMAAAIAVTTPLPLWL FLALLSLFSIGLGTVFPVTVVSIQNAVARPQIGTATGAMNFFRALMASFTVAAFTAVLLIAFGGEIQLGGAEHRHAIGTV AAADMVAAFRWVFAAAAAMLAASAICVAIMEERTLAGPEQTSPPPLEMAE
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=336, Percent_Identity=28.5714285714286, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1790195, Length=362, Percent_Identity=27.6243093922652, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1788392, Length=361, Percent_Identity=33.2409972299169, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1788710, Length=412, Percent_Identity=28.6407766990291, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI87081983, Length=344, Percent_Identity=25, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1790146, Length=153, Percent_Identity=28.7581699346405, Blast_Score=63, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322958, Length=451, Percent_Identity=27.9379157427938, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6323735, Length=434, Percent_Identity=26.2672811059908, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6325455, Length=260, Percent_Identity=32.6923076923077, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319770, Length=394, Percent_Identity=25.6345177664975, Blast_Score=113, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6321663, Length=405, Percent_Identity=25.9259259259259, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6324264, Length=236, Percent_Identity=27.9661016949153, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6322071, Length=234, Percent_Identity=25.6410256410256, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322070, Length=224, Percent_Identity=25.4464285714286, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 55769; Mature: 55638
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSEHRRREPSGRQLLSDEAAAELSHIPTEVIDLGDAPPLAPANTLSQGEVRAILMSLL CCCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH LAMFLAALDQTIVATALPTIGRQFGDVENLSWVITAYLLSSTAVAPVFGSLADIYGRRAT HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IIASISLFIAGSVMCALAPSLLVLILGRALQGLGGGGIMPIVQTVISDVVTPRERGKYQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCHHH YFSAVWVSAGIGGPILGGAFAEHLHWSMIFWINLPLAIGALALLLPKMAKIPTYHRRRKV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCHHHHCCH DWLGGVLLMASAMAVMLALTWGGTRFSWLSPTILALSGGAVLLAVCFVWHALRAPEPFLP HHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCC LQLMGGTVVPWAMAAGGFAMGAMIGLTVHMPLYYEAVYHLTASQSGLALIPIAAVSVLGA HHHCCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH AFTGRAMVKVERYKRIAILGTGFSALMAAAIAVTTPLPLWLFLALLSLFSIGLGTVFPVT HHCCHHHHHHHHHCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH VVSIQNAVARPQIGTATGAMNFFRALMASFTVAAFTAVLLIAFGGEIQLGGAEHRHAIGT HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHH VAAADMVAAFRWVFAAAAAMLAASAICVAIMEERTLAGPEQTSPPPLEMAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SMSEHRRREPSGRQLLSDEAAAELSHIPTEVIDLGDAPPLAPANTLSQGEVRAILMSLL CCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH LAMFLAALDQTIVATALPTIGRQFGDVENLSWVITAYLLSSTAVAPVFGSLADIYGRRAT HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IIASISLFIAGSVMCALAPSLLVLILGRALQGLGGGGIMPIVQTVISDVVTPRERGKYQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCHHH YFSAVWVSAGIGGPILGGAFAEHLHWSMIFWINLPLAIGALALLLPKMAKIPTYHRRRKV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCHHHHCCH DWLGGVLLMASAMAVMLALTWGGTRFSWLSPTILALSGGAVLLAVCFVWHALRAPEPFLP HHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCC LQLMGGTVVPWAMAAGGFAMGAMIGLTVHMPLYYEAVYHLTASQSGLALIPIAAVSVLGA HHHCCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH AFTGRAMVKVERYKRIAILGTGFSALMAAAIAVTTPLPLWLFLALLSLFSIGLGTVFPVT HHCCHHHHHHHHHCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH VVSIQNAVARPQIGTATGAMNFFRALMASFTVAAFTAVLLIAFGGEIQLGGAEHRHAIGT HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHH VAAADMVAAFRWVFAAAAAMLAASAICVAIMEERTLAGPEQTSPPPLEMAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]