| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750597
Identifier: 86750597
GI number: 86750597
Start: 3990107
End: 3990679
Strand: Reverse
Name: 86750597
Synonym: RPB_3487
Alternate gene names: NA
Gene position: 3990679-3990107 (Counterclockwise)
Preceding gene: 86750598
Following gene: 86750596
Centisome position: 74.85
GC content: 61.95
Gene sequence:
>573_bases ATGAGGAAGCGGATCTACTTTCAAGATCTTGACCCGAACGGGTGGCCAGAACCCAGCGAGCTAGCGCCTTACTTCCTAGC GCCAGCCGAACATCCGTGGGCTCCCGATCCGTACGGAAACGACGAATTTGGGCTCGAGATTTCGGGATTGTACGGCACCG ACGGCCAGCCCGGGGTCGATCAGGTCACCGCGTGCCTCACGATGGTGGGTACGCCAGATTTTGGTGTATTTCTTTACTAT CGCAGGTGGGATGGCCGGACCAGGCATCCGCTGGATTGCTACTCCAAGGGCGACATGAGCCGCATACGGGAATGGCTGCG GACGCTGCAGGGCGATCTGCGTCCGATTGGTCTGTTCATCCCCTACGAGAAAGCCTGGCCGGCCGTGAAGGAGTTCATGG AGCGCGACGGCGAGTTGCCGACCAGCATCGAGTGGGTCGATGCCGAGGATCTGCCGCCGAACACGTTTCGCTTTCCGGGC TTCTTCAAACCGGGGCCGGAGCCGCGGGTGCTGCGGGACGAAGACATCAACGACGAGCCGCCCGGCGACGGCTTCGGGTT TCTGCGCCGCTGA
Upstream 100 bases:
>100_bases TCGGACTGGAATTGGGCGATCCGTATGTCACGATTCGCGAGGTAAGGTCAGGTCGCGCGAGCGTGATGTGGCAGGGCGAA TGGCTTGTCTGGAGAAAGAA
Downstream 100 bases:
>100_bases GCAGCGGGCGCGAACGGTTCTCCCAACATGACGAGCGACTGACGGCGGTTGGAGTCGGCTCCCGCCGCGCGCCCGTCCGC CTGCGAGGCGCCGATGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRKRIYFQDLDPNGWPEPSELAPYFLAPAEHPWAPDPYGNDEFGLEISGLYGTDGQPGVDQVTACLTMVGTPDFGVFLYY RRWDGRTRHPLDCYSKGDMSRIREWLRTLQGDLRPIGLFIPYEKAWPAVKEFMERDGELPTSIEWVDAEDLPPNTFRFPG FFKPGPEPRVLRDEDINDEPPGDGFGFLRR
Sequences:
>Translated_190_residues MRKRIYFQDLDPNGWPEPSELAPYFLAPAEHPWAPDPYGNDEFGLEISGLYGTDGQPGVDQVTACLTMVGTPDFGVFLYY RRWDGRTRHPLDCYSKGDMSRIREWLRTLQGDLRPIGLFIPYEKAWPAVKEFMERDGELPTSIEWVDAEDLPPNTFRFPG FFKPGPEPRVLRDEDINDEPPGDGFGFLRR >Mature_190_residues MRKRIYFQDLDPNGWPEPSELAPYFLAPAEHPWAPDPYGNDEFGLEISGLYGTDGQPGVDQVTACLTMVGTPDFGVFLYY RRWDGRTRHPLDCYSKGDMSRIREWLRTLQGDLRPIGLFIPYEKAWPAVKEFMERDGELPTSIEWVDAEDLPPNTFRFPG FFKPGPEPRVLRDEDINDEPPGDGFGFLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21904; Mature: 21904
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRIYFQDLDPNGWPEPSELAPYFLAPAEHPWAPDPYGNDEFGLEISGLYGTDGQPGVD CCCCEEEEECCCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHH QVTACLTMVGTPDFGVFLYYRRWDGRTRHPLDCYSKGDMSRIREWLRTLQGDLRPIGLFI HHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEE PYEKAWPAVKEFMERDGELPTSIEWVDAEDLPPNTFRFPGFFKPGPEPRVLRDEDINDEP CCHHCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCCCEECCCCCCCCC PGDGFGFLRR CCCCCCCCCC >Mature Secondary Structure MRKRIYFQDLDPNGWPEPSELAPYFLAPAEHPWAPDPYGNDEFGLEISGLYGTDGQPGVD CCCCEEEEECCCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHH QVTACLTMVGTPDFGVFLYYRRWDGRTRHPLDCYSKGDMSRIREWLRTLQGDLRPIGLFI HHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEE PYEKAWPAVKEFMERDGELPTSIEWVDAEDLPPNTFRFPGFFKPGPEPRVLRDEDINDEP CCHHCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCCCEECCCCCCCCC PGDGFGFLRR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA