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The map label for this gene is 86750591

Identifier: 86750591

GI number: 86750591

Start: 3985787

End: 3987040

Strand: Reverse

Name: 86750591

Synonym: RPB_3481

Alternate gene names: NA

Gene position: 3987040-3985787 (Counterclockwise)

Preceding gene: 86750592

Following gene: 86750588

Centisome position: 74.78

GC content: 68.18

Gene sequence:

>1254_bases
ATGGACTACGACATCACCCACGCCCCCGAGACCAAGGCCGGCATTGCCGGCGACGATGCGCAGCAGGTCTACGACACGCT
GATGCGCACCTTCGAGGACTACAAGGCGGAGAACGATACCCGGCTGCAGGCGATCGAGAAGCGGCGCGGCGACGTGCTGG
CGGAGGAGAAGGTGGCGCGGATCGACGCGGCGCTGGATGCGCAGCAGCGCAAGCTCGACGAACTGGCGCTGAAGGCGGCG
CGGCCGCAGCTCGGCAGCGCGATCACGCCGGTTCCGGCGGCGCGCGAGCACAAGAGTGCGTTCGACGCCTATATCCGCTT
CGGCGACACCGCGGGGCTGCGCGCGCTCGAAACCAAGGCGATGTCGATCGGCTCCAATCCCGACGGCGGCTACCTGGTTC
CGGACGAGCTGGAGCATACGATCGGCGAGCGGCTAGCGGTGGTCTCGCCGATCCGCGCGATCGCCGCCGTGCGGCAGATC
TCCGGCAACGTCTACAAGAAGCCGTTCATGATCACCGGCCCCACCACCGGCTGGGTCGGCGAGACCGCGGCGCGGCCGCA
GACCGGCTCGCCGCAGCTCGACGCGCTGTCGTTCCCGGCGATGGAGCTGTATGCGATGCCGGCGGCGACCGCGAATCTGC
TGGAAGACGCCGTCGTCAATCTCGACCAGTGGATCGCCGGCGAGGTCGAATTGGTGTTCTCGGTGCAGGAGGGGACGGCC
TTCATCACCGGCGACGGCCTCGGCAAGCCGAAGGGCTTTCTCGCCTACCCGACGGTGGCGAATGCCTCCTGGAGCTGGGG
CAATCTCGGCACCATCGCCTCCGGCGCCGCCGGCGCGTTCGCCGCATCGAGCCCGTCCGACGTGCTGATCGACCTGATCT
ACGGGCTGAAGCCGGGCTACCGCCAGAACGCCTCGTTCGTGATGAACCGGCGCACCCAGGCGGCGGTCCGCAAGTTCAAG
GACTCCACCGGCGTCTATCTGTGGCAGCCGCCGGCGACCGTCTCCGGCCGCGCCAGCCTGATCGGCTTCCCGCTGGTCGA
TGCCGAGGACATGCCGGACATCGCCGCGAACTCGCTCAGCATCGCGTTCGGCGACTTCCAGCGCGGCTATCTGATCGTCG
ACCGCCAGGGTATCCGCGTGCTGCGCGACCCGTATTCCGCCAAGCCCTACGTGCTGTTCTACACCACCAAGCGCGTCGGC
GGCGGCGTGCAGGACTTCGACGCGATCAAGCTGTTGAAGTTCGCGGCGAGTTGA

Upstream 100 bases:

>100_bases
AGGGTGCCAAGTCATCTCCATCAACTGTCCCGACCGCCGTGGCTTCCCGCCGCGGCGTTTTCGTTCGTGCCTATCCCGAA
ACGCCCACCAGGAGAACCCG

Downstream 100 bases:

>100_bases
GGGAAGCTGACCGCATCGCACGCAATGGCGAGCGACCAGATTGCCGTTCGCAAACTGGGGACTCGCCATTGCCTCCGCTC
GGCAAAAACGGATCTCGATC

Product: Phage major capsid protein, HK97

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Capsid Protein Of Prophage; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Capsid Family; Phage Prohead Protease; Phage Capsid Protein; Prophage; Phage Capsid Protein Gp; Bacteriophage Protein; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; Capsid C; Phage Capsid Family Protein

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MDYDITHAPETKAGIAGDDAQQVYDTLMRTFEDYKAENDTRLQAIEKRRGDVLAEEKVARIDAALDAQQRKLDELALKAA
RPQLGSAITPVPAAREHKSAFDAYIRFGDTAGLRALETKAMSIGSNPDGGYLVPDELEHTIGERLAVVSPIRAIAAVRQI
SGNVYKKPFMITGPTTGWVGETAARPQTGSPQLDALSFPAMELYAMPAATANLLEDAVVNLDQWIAGEVELVFSVQEGTA
FITGDGLGKPKGFLAYPTVANASWSWGNLGTIASGAAGAFAASSPSDVLIDLIYGLKPGYRQNASFVMNRRTQAAVRKFK
DSTGVYLWQPPATVSGRASLIGFPLVDAEDMPDIAANSLSIAFGDFQRGYLIVDRQGIRVLRDPYSAKPYVLFYTTKRVG
GGVQDFDAIKLLKFAAS

Sequences:

>Translated_417_residues
MDYDITHAPETKAGIAGDDAQQVYDTLMRTFEDYKAENDTRLQAIEKRRGDVLAEEKVARIDAALDAQQRKLDELALKAA
RPQLGSAITPVPAAREHKSAFDAYIRFGDTAGLRALETKAMSIGSNPDGGYLVPDELEHTIGERLAVVSPIRAIAAVRQI
SGNVYKKPFMITGPTTGWVGETAARPQTGSPQLDALSFPAMELYAMPAATANLLEDAVVNLDQWIAGEVELVFSVQEGTA
FITGDGLGKPKGFLAYPTVANASWSWGNLGTIASGAAGAFAASSPSDVLIDLIYGLKPGYRQNASFVMNRRTQAAVRKFK
DSTGVYLWQPPATVSGRASLIGFPLVDAEDMPDIAANSLSIAFGDFQRGYLIVDRQGIRVLRDPYSAKPYVLFYTTKRVG
GGVQDFDAIKLLKFAAS
>Mature_417_residues
MDYDITHAPETKAGIAGDDAQQVYDTLMRTFEDYKAENDTRLQAIEKRRGDVLAEEKVARIDAALDAQQRKLDELALKAA
RPQLGSAITPVPAAREHKSAFDAYIRFGDTAGLRALETKAMSIGSNPDGGYLVPDELEHTIGERLAVVSPIRAIAAVRQI
SGNVYKKPFMITGPTTGWVGETAARPQTGSPQLDALSFPAMELYAMPAATANLLEDAVVNLDQWIAGEVELVFSVQEGTA
FITGDGLGKPKGFLAYPTVANASWSWGNLGTIASGAAGAFAASSPSDVLIDLIYGLKPGYRQNASFVMNRRTQAAVRKFK
DSTGVYLWQPPATVSGRASLIGFPLVDAEDMPDIAANSLSIAFGDFQRGYLIVDRQGIRVLRDPYSAKPYVLFYTTKRVG
GGVQDFDAIKLLKFAAS

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44919; Mature: 44919

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYDITHAPETKAGIAGDDAQQVYDTLMRTFEDYKAENDTRLQAIEKRRGDVLAEEKVAR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHH
IDAALDAQQRKLDELALKAARPQLGSAITPVPAAREHKSAFDAYIRFGDTAGLRALETKA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHH
MSIGSNPDGGYLVPDELEHTIGERLAVVSPIRAIAAVRQISGNVYKKPFMITGPTTGWVG
HCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEECCCCCCCC
ETAARPQTGSPQLDALSFPAMELYAMPAATANLLEDAVVNLDQWIAGEVELVFSVQEGTA
CCCCCCCCCCCCCCHHCCCHHHEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEE
FITGDGLGKPKGFLAYPTVANASWSWGNLGTIASGAAGAFAASSPSDVLIDLIYGLKPGY
EEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
RQNASFVMNRRTQAAVRKFKDSTGVYLWQPPATVSGRASLIGFPLVDAEDMPDIAANSLS
CCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHCCEE
IAFGDFQRGYLIVDRQGIRVLRDPYSAKPYVLFYTTKRVGGGVQDFDAIKLLKFAAS
EEECCCCCCEEEEECCCCHHHCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDYDITHAPETKAGIAGDDAQQVYDTLMRTFEDYKAENDTRLQAIEKRRGDVLAEEKVAR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHH
IDAALDAQQRKLDELALKAARPQLGSAITPVPAAREHKSAFDAYIRFGDTAGLRALETKA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHH
MSIGSNPDGGYLVPDELEHTIGERLAVVSPIRAIAAVRQISGNVYKKPFMITGPTTGWVG
HCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEECCCCCCCC
ETAARPQTGSPQLDALSFPAMELYAMPAATANLLEDAVVNLDQWIAGEVELVFSVQEGTA
CCCCCCCCCCCCCCHHCCCHHHEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEE
FITGDGLGKPKGFLAYPTVANASWSWGNLGTIASGAAGAFAASSPSDVLIDLIYGLKPGY
EEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
RQNASFVMNRRTQAAVRKFKDSTGVYLWQPPATVSGRASLIGFPLVDAEDMPDIAANSLS
CCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHCCEE
IAFGDFQRGYLIVDRQGIRVLRDPYSAKPYVLFYTTKRVGGGVQDFDAIKLLKFAAS
EEECCCCCCEEEEECCCCHHHCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA