| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is aroH [H]
Identifier: 86750494
GI number: 86750494
Start: 3867207
End: 3868595
Strand: Reverse
Name: aroH [H]
Synonym: RPB_3383
Alternate gene names: 86750494
Gene position: 3868595-3867207 (Counterclockwise)
Preceding gene: 86750495
Following gene: 86750493
Centisome position: 72.56
GC content: 65.59
Gene sequence:
>1389_bases ATGTCCGAACGTTGGACACCCGATAGCTGGCGCAGCAAGCCGGTTCAGCAGATGCCGGACTACCCGGACGCGAAGGCGCT GGGCGACGTCGAGGCGCAGCTGTCGACCTTTCCGCCGCTGGTTTTTGCAGGTGAGGCGCGCAACCTGAAGAAGGCGCTGG CCAGCGTCGCCGCCGGCGAATCCTTCCTGCTTCAGGGCGGCGATTGCGCCGAGAGCTTCGCCGAGCATGGCGCCAACAAC ATCCGCGACCTGTTCCGCGTCTTCCTGCAGATGGCGATCGTGCTGACCTATGCGGGCGCTTCGCCGGTGGTGAAGGTCGG CCGCATCGCCGGCCAGTTCGCCAAGCCGCGCTCGGCACCATTCGAGAAACGCGACGGCGTCGAACTGCCGAGCTATCGCG GCGACATCGTCAACGACATTGGCTTCACTGCGGAGTCGCGCGTGCCCGATCCGCGCCGTCAGCTCGAGGCCTATCGGCAG TCGGCGGCGACGCTGAACCTGCTGCGCGCCTTCGCCAAGGGCGGCTATGCCAGCGTCGAGAACGTGCATCGCTGGATGCT GCAGTCGGTCAGCGACTCTCCGCAGTCGAAGGCCTATGCGGATCTCGCCGATCGCGTCTCCGGTGCGCTCGATTTCATGC GCGCCTGCGGGCTGACGTTTGCGGTCGATAGCTCGCTCGGCACCACCGATTTCTACACCAGCCACGAAGCGTTGCTGCTC GGCTACGAGCAGGCGATGACCCGCGTCGACTCGACCACCGGCGATTGGTACGCGACCAGCGGCCACATGCTGTGGATCGG CGACCGCACCCGCCAGCTCGATCACGCCCATGTCGAGTATTTCCGCGGCATCAAGAATCCGATCGGGCTGAAATGCGGCC CGTCGCTGAAGACCGACGAACTCTTGAAGCTGATCGACGTGCTCAATCCCGACAACGAGCCGGGCCGGCTGACGCTGATC GGCCGGTTCGGCCATGAGAAGATCGGCGATCACCTGCCGGCGATGATCCGCGCCGTGCAGCGCGAGGGCCGCAAGGTGGT GTGGTCGTGCGATCCGATGCACGGCAACACCATCACGTCGAACTCCGGCTACAAGACCCGGCCGTTCGATCGCATCCTGT CGGAGGTGCGCTCGTTCTTCACCATCCACGCCGCGGAAGGCACCCATGCCGGCGGCGTGCATCTGGAGATGACCGGGCAG AACGTCACCGAATGCATCGGCGGCGCCCGCGCGATCACCGATGAGGACCTCAACAACCGCTATCACACCGCCTGCGATCC GCGGCTCAATGCCGAGCAGTCGATCGACATGGCGTTCCTGATCGCGGATCTCTTGAAGCAGGGTCGGGCCGGCAAGGTCA GTCCGCTGCCGGTCGCGGCGGGGCTGTAA
Upstream 100 bases:
>100_bases ACGCTTTGCGGAATTCTACCTAGCGGCCGGGAAGGACGCTGTGTATAACGCGGCCTTCGCGAACATATATTAGCGCGGCA GGTCCTCAGGAGTTGGTCTC
Downstream 100 bases:
>100_bases GAGTCGGCCACCATCATCGATCTCTCTTCCGTCATGGCCGGGTTCGTCCCGGCCATCCACGCCTTACTTGGCGTCGCCTC CGAAGACGTGGATGCCCGCG
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MSERWTPDSWRSKPVQQMPDYPDAKALGDVEAQLSTFPPLVFAGEARNLKKALASVAAGESFLLQGGDCAESFAEHGANN IRDLFRVFLQMAIVLTYAGASPVVKVGRIAGQFAKPRSAPFEKRDGVELPSYRGDIVNDIGFTAESRVPDPRRQLEAYRQ SAATLNLLRAFAKGGYASVENVHRWMLQSVSDSPQSKAYADLADRVSGALDFMRACGLTFAVDSSLGTTDFYTSHEALLL GYEQAMTRVDSTTGDWYATSGHMLWIGDRTRQLDHAHVEYFRGIKNPIGLKCGPSLKTDELLKLIDVLNPDNEPGRLTLI GRFGHEKIGDHLPAMIRAVQREGRKVVWSCDPMHGNTITSNSGYKTRPFDRILSEVRSFFTIHAAEGTHAGGVHLEMTGQ NVTECIGGARAITDEDLNNRYHTACDPRLNAEQSIDMAFLIADLLKQGRAGKVSPLPVAAGL
Sequences:
>Translated_462_residues MSERWTPDSWRSKPVQQMPDYPDAKALGDVEAQLSTFPPLVFAGEARNLKKALASVAAGESFLLQGGDCAESFAEHGANN IRDLFRVFLQMAIVLTYAGASPVVKVGRIAGQFAKPRSAPFEKRDGVELPSYRGDIVNDIGFTAESRVPDPRRQLEAYRQ SAATLNLLRAFAKGGYASVENVHRWMLQSVSDSPQSKAYADLADRVSGALDFMRACGLTFAVDSSLGTTDFYTSHEALLL GYEQAMTRVDSTTGDWYATSGHMLWIGDRTRQLDHAHVEYFRGIKNPIGLKCGPSLKTDELLKLIDVLNPDNEPGRLTLI GRFGHEKIGDHLPAMIRAVQREGRKVVWSCDPMHGNTITSNSGYKTRPFDRILSEVRSFFTIHAAEGTHAGGVHLEMTGQ NVTECIGGARAITDEDLNNRYHTACDPRLNAEQSIDMAFLIADLLKQGRAGKVSPLPVAAGL >Mature_461_residues SERWTPDSWRSKPVQQMPDYPDAKALGDVEAQLSTFPPLVFAGEARNLKKALASVAAGESFLLQGGDCAESFAEHGANNI RDLFRVFLQMAIVLTYAGASPVVKVGRIAGQFAKPRSAPFEKRDGVELPSYRGDIVNDIGFTAESRVPDPRRQLEAYRQS AATLNLLRAFAKGGYASVENVHRWMLQSVSDSPQSKAYADLADRVSGALDFMRACGLTFAVDSSLGTTDFYTSHEALLLG YEQAMTRVDSTTGDWYATSGHMLWIGDRTRQLDHAHVEYFRGIKNPIGLKCGPSLKTDELLKLIDVLNPDNEPGRLTLIG RFGHEKIGDHLPAMIRAVQREGRKVVWSCDPMHGNTITSNSGYKTRPFDRILSEVRSFFTIHAAEGTHAGGVHLEMTGQN VTECIGGARAITDEDLNNRYHTACDPRLNAEQSIDMAFLIADLLKQGRAGKVSPLPVAAGL
Specific function: Unknown
COG id: COG3200
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002480 [H]
Pfam domain/function: PF01474 DAHP_synth_2 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 50642; Mature: 50511
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERWTPDSWRSKPVQQMPDYPDAKALGDVEAQLSTFPPLVFAGEARNLKKALASVAAGE CCCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCC SFLLQGGDCAESFAEHGANNIRDLFRVFLQMAIVLTYAGASPVVKVGRIAGQFAKPRSAP CEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC FEKRDGVELPSYRGDIVNDIGFTAESRVPDPRRQLEAYRQSAATLNLLRAFAKGGYASVE CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH NVHRWMLQSVSDSPQSKAYADLADRVSGALDFMRACGLTFAVDSSLGTTDFYTSHEALLL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHEE GYEQAMTRVDSTTGDWYATSGHMLWIGDRTRQLDHAHVEYFRGIKNPIGLKCGPSLKTDE EHHHHHHHHCCCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH LLKLIDVLNPDNEPGRLTLIGRFGHEKIGDHLPAMIRAVQREGRKVVWSCDPMHGNTITS HHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEC NSGYKTRPFDRILSEVRSFFTIHAAEGTHAGGVHLEMTGQNVTECIGGARAITDEDLNNR CCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCHHHHHHCCCCCCCCHHCCCC YHTACDPRLNAEQSIDMAFLIADLLKQGRAGKVSPLPVAAGL CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SERWTPDSWRSKPVQQMPDYPDAKALGDVEAQLSTFPPLVFAGEARNLKKALASVAAGE CCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCC SFLLQGGDCAESFAEHGANNIRDLFRVFLQMAIVLTYAGASPVVKVGRIAGQFAKPRSAP CEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC FEKRDGVELPSYRGDIVNDIGFTAESRVPDPRRQLEAYRQSAATLNLLRAFAKGGYASVE CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH NVHRWMLQSVSDSPQSKAYADLADRVSGALDFMRACGLTFAVDSSLGTTDFYTSHEALLL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHEE GYEQAMTRVDSTTGDWYATSGHMLWIGDRTRQLDHAHVEYFRGIKNPIGLKCGPSLKTDE EHHHHHHHHCCCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH LLKLIDVLNPDNEPGRLTLIGRFGHEKIGDHLPAMIRAVQREGRKVVWSCDPMHGNTITS HHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEC NSGYKTRPFDRILSEVRSFFTIHAAEGTHAGGVHLEMTGQNVTECIGGARAITDEDLNNR CCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCHHHHHHCCCCCCCCHHCCCC YHTACDPRLNAEQSIDMAFLIADLLKQGRAGKVSPLPVAAGL CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953; 8760910 [H]