| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750462
Identifier: 86750462
GI number: 86750462
Start: 3834150
End: 3834773
Strand: Reverse
Name: 86750462
Synonym: RPB_3351
Alternate gene names: NA
Gene position: 3834773-3834150 (Counterclockwise)
Preceding gene: 86750471
Following gene: 86750457
Centisome position: 71.92
GC content: 65.54
Gene sequence:
>624_bases ATGGCCAATCCGCGCGAACCGATGCTGCACCCGATTCCGATCCTGTCACTGCGACCGACGCAGATGACCGTCGGCCTGCG CGAAGTCGAAGAAAAGCGCCGGCGCTGGCGCGCGCACAAGCCGAAGAAGGAAGGCCGGCGGCTCGCCGAGCACATGATCC CGGTCGTGCTCGGCCCTGGCAAGCGCCACTATGTGGTCGATCACCACCATCTCGCCCGCGCGCTGCATGAAGAGGGCATC AAGGACGTCGCCGTCACGGTGATCGCCGATCTCAGCATGGTCGATCGCGACGCGTTCTGGGTCGTGCTCGACAGCCGGCG CTGGGTCTATCCCTACGACGCCAAGGGCGAGCGGCACCATTACAAGGATCTGCCGAAAACTGTCGCCGCGCTGAAGGACG ATCCGTTCCGCTCGCTCGCTGGCGAGCTGCGCCGGATCGGCGGCTACGCCAAGGACACCACGCCCTTCAGCGAATTCCTT TGGGCGGATTTCCTGCGGCGCCGGCTGTCGCGCAAATCGGTCGACGCGGATTTCGCGAAGGCGACGGAACTGTCGCTGGC GCTCGCCAAGAGCAGGGATGCGATCTATCTGCCGGGCTGGTGCGGACCGGCGTTCGACGATTGA
Upstream 100 bases:
>100_bases GCTTTGTCTCGCCGGCTGCGCCCCGCGCGCTCCATGCTGCGTTGCGCACAAGCCGCCGCGTGCCATAATTCGAGCCCTGC CTGCCGACGGAGTCTGAACG
Downstream 100 bases:
>100_bases CCGTGCTGCGGCGGCGCATCAATCCTCCACCGCCGGCGAGCCCTTGCTCTTGGTCTCGTCGCCGCCGCCTTCCGAGTCCT TGCCGCCGAGCAGGCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: ParB-Like Nuclease Superfamily
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MANPREPMLHPIPILSLRPTQMTVGLREVEEKRRRWRAHKPKKEGRRLAEHMIPVVLGPGKRHYVVDHHHLARALHEEGI KDVAVTVIADLSMVDRDAFWVVLDSRRWVYPYDAKGERHHYKDLPKTVAALKDDPFRSLAGELRRIGGYAKDTTPFSEFL WADFLRRRLSRKSVDADFAKATELSLALAKSRDAIYLPGWCGPAFDD
Sequences:
>Translated_207_residues MANPREPMLHPIPILSLRPTQMTVGLREVEEKRRRWRAHKPKKEGRRLAEHMIPVVLGPGKRHYVVDHHHLARALHEEGI KDVAVTVIADLSMVDRDAFWVVLDSRRWVYPYDAKGERHHYKDLPKTVAALKDDPFRSLAGELRRIGGYAKDTTPFSEFL WADFLRRRLSRKSVDADFAKATELSLALAKSRDAIYLPGWCGPAFDD >Mature_206_residues ANPREPMLHPIPILSLRPTQMTVGLREVEEKRRRWRAHKPKKEGRRLAEHMIPVVLGPGKRHYVVDHHHLARALHEEGIK DVAVTVIADLSMVDRDAFWVVLDSRRWVYPYDAKGERHHYKDLPKTVAALKDDPFRSLAGELRRIGGYAKDTTPFSEFLW ADFLRRRLSRKSVDADFAKATELSLALAKSRDAIYLPGWCGPAFDD
Specific function: Unknown
COG id: COG4318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23851; Mature: 23720
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPREPMLHPIPILSLRPTQMTVGLREVEEKRRRWRAHKPKKEGRRLAEHMIPVVLGPG CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCC KRHYVVDHHHLARALHEEGIKDVAVTVIADLSMVDRDAFWVVLDSRRWVYPYDAKGERHH CCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCHH YKDLPKTVAALKDDPFRSLAGELRRIGGYAKDTTPFSEFLWADFLRRRLSRKSVDADFAK HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH ATELSLALAKSRDAIYLPGWCGPAFDD HHHHHHHHHCCCCEEEECCCCCCCCCC >Mature Secondary Structure ANPREPMLHPIPILSLRPTQMTVGLREVEEKRRRWRAHKPKKEGRRLAEHMIPVVLGPG CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCC KRHYVVDHHHLARALHEEGIKDVAVTVIADLSMVDRDAFWVVLDSRRWVYPYDAKGERHH CCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCHH YKDLPKTVAALKDDPFRSLAGELRRIGGYAKDTTPFSEFLWADFLRRRLSRKSVDADFAK HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH ATELSLALAKSRDAIYLPGWCGPAFDD HHHHHHHHHCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA