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The map label for this gene is ssuC [H]

Identifier: 86750445

GI number: 86750445

Start: 3814618

End: 3815415

Strand: Reverse

Name: ssuC [H]

Synonym: RPB_3334

Alternate gene names: 86750445

Gene position: 3815415-3814618 (Counterclockwise)

Preceding gene: 86750446

Following gene: 86750444

Centisome position: 71.56

GC content: 64.91

Gene sequence:

>798_bases
ATGTCGCGGCTGAAACTTGTGTCGTTGCAGCTTCTCGTCGCCGTCGTCGCGTTGGCGGTGTGGCAGGTGCTCACCACGGT
GCCGATCGCCGGCAAATTGCTGCTGCCGCCGTTCTTCTTTTCCAATCCGGTCGATGTCGCCGCGCAAGTCTATGCCTGGT
TCGCCTCCGGCATGATCTGGAAGCATCTGCTGATCACGCTGTGGGAATCGCTGCTGGCGTTCGTGATCGGCTCCGTGGCG
GGCGTGCTGGTCGGGTTCTGGTTCGCGCGGCAGCCGCGGGTCGCCGCGGTGTTCGATCCCTATGTGAAGATGTTCAACGC
ACTGCCGCGCGTGGTGCTGGCGCCGATCTTCACGCTGTGGCTCGGGCTCGGGATCTGGTCGAAGGTCGCGCTCGGCGTGA
CGCTGGTTTTCTTCGTGGTGTTCTTCAACGTCTATCAGGGCGTCAAGGAGACCAGCGCGACGCTGGTCGACAATGCGCGG
ATGCTCGGGATGAGCGAGCGGCAGATGATGCGGCACGTGTTCTGGCCCTCGGCGCTGTCGTGGATGTTCTCGTCGCTGCA
CACCGCGGTCGGCTTCGCGGTGGTCGGCGCGGTGGTCGGCGAATATCTCGGCGCCGCGGCCGGGCTCGGCTATCTGATCC
AGCAGGCCGAAGGCAGCTTCGATGTGGCCGGCGTGTTCGCCGGCATGTTCGTGCTGTCGGTGTTCGTGATCCTGATCGAT
CTTGCGGTCAGTATGGTGGAGAAGCGGCTGCTGGTGTGGCGGCCGCAGCCGGGCGGGGCCGTCCAGCAGACCGACTAG

Upstream 100 bases:

>100_bases
GGGAGGGTTGGGGTGGGGGGTGGCCACGGGCTCAGTGCTCGCGGCCCCCCACCCCCGACCCCTCCCCGCAAGGGGGAGGG
GAGGACGCGGGAGCCTCGCT

Downstream 100 bases:

>100_bases
AGTCCTCGGCGGCTTTCGCCTATCCTGCGCCGCCTCGTCCCGGGAGAAACGCATGAAAACGATATTCGCCAAGATCGCCG
CGGTGCTGTCGGCGCTGCTG

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSRLKLVSLQLLVAVVALAVWQVLTTVPIAGKLLLPPFFFSNPVDVAAQVYAWFASGMIWKHLLITLWESLLAFVIGSVA
GVLVGFWFARQPRVAAVFDPYVKMFNALPRVVLAPIFTLWLGLGIWSKVALGVTLVFFVVFFNVYQGVKETSATLVDNAR
MLGMSERQMMRHVFWPSALSWMFSSLHTAVGFAVVGAVVGEYLGAAAGLGYLIQQAEGSFDVAGVFAGMFVLSVFVILID
LAVSMVEKRLLVWRPQPGGAVQQTD

Sequences:

>Translated_265_residues
MSRLKLVSLQLLVAVVALAVWQVLTTVPIAGKLLLPPFFFSNPVDVAAQVYAWFASGMIWKHLLITLWESLLAFVIGSVA
GVLVGFWFARQPRVAAVFDPYVKMFNALPRVVLAPIFTLWLGLGIWSKVALGVTLVFFVVFFNVYQGVKETSATLVDNAR
MLGMSERQMMRHVFWPSALSWMFSSLHTAVGFAVVGAVVGEYLGAAAGLGYLIQQAEGSFDVAGVFAGMFVLSVFVILID
LAVSMVEKRLLVWRPQPGGAVQQTD
>Mature_264_residues
SRLKLVSLQLLVAVVALAVWQVLTTVPIAGKLLLPPFFFSNPVDVAAQVYAWFASGMIWKHLLITLWESLLAFVIGSVAG
VLVGFWFARQPRVAAVFDPYVKMFNALPRVVLAPIFTLWLGLGIWSKVALGVTLVFFVVFFNVYQGVKETSATLVDNARM
LGMSERQMMRHVFWPSALSWMFSSLHTAVGFAVVGAVVGEYLGAAAGLGYLIQQAEGSFDVAGVFAGMFVLSVFVILIDL
AVSMVEKRLLVWRPQPGGAVQQTD

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=255, Percent_Identity=26.6666666666667, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87081802, Length=237, Percent_Identity=27.0042194092827, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28989; Mature: 28858

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SRLKLVSLQLLVAVVALAVWQVLTTVPIAGKLLLPPFFFSNPVDVAAQVYAWFASGMIW
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCHHHHHHHHHHHHHHHHHH
KHLLITLWESLLAFVIGSVAGVLVGFWFARQPRVAAVFDPYVKMFNALPRVVLAPIFTLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLGIWSKVALGVTLVFFVVFFNVYQGVKETSATLVDNARMLGMSERQMMRHVFWPSALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
WMFSSLHTAVGFAVVGAVVGEYLGAAAGLGYLIQQAEGSFDVAGVFAGMFVLSVFVILID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LAVSMVEKRLLVWRPQPGGAVQQTD
HHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]