Click here to switch to the map view.

The map label for this gene is 86750405

Identifier: 86750405

GI number: 86750405

Start: 3764336

End: 3765433

Strand: Reverse

Name: 86750405

Synonym: RPB_3294

Alternate gene names: NA

Gene position: 3765433-3764336 (Counterclockwise)

Preceding gene: 86750406

Following gene: 86750404

Centisome position: 70.62

GC content: 63.84

Gene sequence:

>1098_bases
ATGTCCGACGCACTTGATCGCTACGAAGCCGCGGCTGACAGCTTCAGCACGGCGCCGACACTTGCCGAAATGCCCCGCCG
CAACCTCACGGCGAAAGGCATCTCCGGTCCGACAGCGGCGCACGTGATCGAAGAAATCCACACCCCCTTCAACCTCGCTT
ACGTGACGTTCACGACCGGATCGTCCGCGTTCCAGAACATCGTCGGCGTCGCACACAGCGAGATCGAGGCGCGTTGCGAA
GCGACGCGTCGGGTGATGGCGGCGATCGGCGCGAAACCGGGCGACCGGATGTTCGTGACCTATCCACCGCTGGTGAACGT
GTTTTCGAAAGAAGCCCTCGATCGCTGCGGCATCGAATGGTTCTTCCTCGAGCGCTCGAGCCGGGCGGCTTTCATCACCG
CGTTCTGTCGCGAGCGTCCGCAGATCGTGCTCGGCGAGTCGTCGTTCATTCGCGCGAGCCTTGCCGAGGCCAAGCAACTC
GGCCTCGCCGCCGATCTGCCGCCGAGCTGTCGGATCGTGGTGGCCGGCACGCCGCTCGATCTCGAGCTGATCGCCGAGGT
CGCCGTGCAGAACTACCAAGTCCACGATCTCTACGGCTGCCAGGAATTCGGCTGGCTGACGCTCGACGGCAAGCCGATGC
GCGACGACCTGTCGTTGGTGCCGTCGCCGGCGGGCGAGGGGTTTTGCGAATTGGTGGTCGGCGGGCTGCCGATGGGCGAC
AGTTTCCCGATCTCCGAAACGGGCCACGTCTGCGATCCGGCGGGGAAGATCATCACCTATCGTCGACGACGCACCTATCC
GGAATACGAAATCGTCGTCGAGAAGACGCCCGTCGCCTCGCACGAGACTATCGAGCGTGCCGCGCGCACCATTCTTCGTA
TCAAGAGCCGCGTGGTGAGAGTTTCACGGAATCTTCAGACCTCGTGCGATGCCACTGAGCTGCGCCTGGTGCCCGGAGCC
GGTGCCGAGACGATCGACCCCGTACGACTACGTATCACCGGCCCTGTGAAGACGCAGGCCTTCGACGATCTGGTCAAAGC
CCAGCTGGACGTCCAGTCGACCTCCAAGACCGATCCGGTCTGGGCCAAGAAGCGCTGA

Upstream 100 bases:

>100_bases
TTCGCCCGCACGTGCTGGAGCGTCTCAACGCTGAATTCGCAGCGGTGCAGGCCCGTTTCCGGCCGCAGGCGAATTGAGAG
CTGAAGGGGGAGTGGGTTTC

Downstream 100 bases:

>100_bases
GTTGAGCGGCCGGCGAGGAGCCGGTTCATGCGCGGTCGCTGTGACGATCGCGACGGAGTTGAGGACGATGTTGGGACGAC
GACATACCATGGTGGAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSDALDRYEAAADSFSTAPTLAEMPRRNLTAKGISGPTAAHVIEEIHTPFNLAYVTFTTGSSAFQNIVGVAHSEIEARCE
ATRRVMAAIGAKPGDRMFVTYPPLVNVFSKEALDRCGIEWFFLERSSRAAFITAFCRERPQIVLGESSFIRASLAEAKQL
GLAADLPPSCRIVVAGTPLDLELIAEVAVQNYQVHDLYGCQEFGWLTLDGKPMRDDLSLVPSPAGEGFCELVVGGLPMGD
SFPISETGHVCDPAGKIITYRRRRTYPEYEIVVEKTPVASHETIERAARTILRIKSRVVRVSRNLQTSCDATELRLVPGA
GAETIDPVRLRITGPVKTQAFDDLVKAQLDVQSTSKTDPVWAKKR

Sequences:

>Translated_365_residues
MSDALDRYEAAADSFSTAPTLAEMPRRNLTAKGISGPTAAHVIEEIHTPFNLAYVTFTTGSSAFQNIVGVAHSEIEARCE
ATRRVMAAIGAKPGDRMFVTYPPLVNVFSKEALDRCGIEWFFLERSSRAAFITAFCRERPQIVLGESSFIRASLAEAKQL
GLAADLPPSCRIVVAGTPLDLELIAEVAVQNYQVHDLYGCQEFGWLTLDGKPMRDDLSLVPSPAGEGFCELVVGGLPMGD
SFPISETGHVCDPAGKIITYRRRRTYPEYEIVVEKTPVASHETIERAARTILRIKSRVVRVSRNLQTSCDATELRLVPGA
GAETIDPVRLRITGPVKTQAFDDLVKAQLDVQSTSKTDPVWAKKR
>Mature_364_residues
SDALDRYEAAADSFSTAPTLAEMPRRNLTAKGISGPTAAHVIEEIHTPFNLAYVTFTTGSSAFQNIVGVAHSEIEARCEA
TRRVMAAIGAKPGDRMFVTYPPLVNVFSKEALDRCGIEWFFLERSSRAAFITAFCRERPQIVLGESSFIRASLAEAKQLG
LAADLPPSCRIVVAGTPLDLELIAEVAVQNYQVHDLYGCQEFGWLTLDGKPMRDDLSLVPSPAGEGFCELVVGGLPMGDS
FPISETGHVCDPAGKIITYRRRRTYPEYEIVVEKTPVASHETIERAARTILRIKSRVVRVSRNLQTSCDATELRLVPGAG
AETIDPVRLRITGPVKTQAFDDLVKAQLDVQSTSKTDPVWAKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39970; Mature: 39839

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDALDRYEAAADSFSTAPTLAEMPRRNLTAKGISGPTAAHVIEEIHTPFNLAYVTFTTG
CCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECC
SSAFQNIVGVAHSEIEARCEATRRVMAAIGAKPGDRMFVTYPPLVNVFSKEALDRCGIEW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCEE
FFLERSSRAAFITAFCRERPQIVLGESSFIRASLAEAKQLGLAADLPPSCRIVVAGTPLD
EEEECCCCHHHEEHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
LELIAEVAVQNYQVHDLYGCQEFGWLTLDGKPMRDDLSLVPSPAGEGFCELVVGGLPMGD
HHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHEECCCCCCC
SFPISETGHVCDPAGKIITYRRRRTYPEYEIVVEKTPVASHETIERAARTILRIKSRVVR
CCCCCCCCCCCCCCCCEEEEHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VSRNLQTSCDATELRLVPGAGAETIDPVRLRITGPVKTQAFDDLVKAQLDVQSTSKTDPV
HHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
WAKKR
CCCCC
>Mature Secondary Structure 
SDALDRYEAAADSFSTAPTLAEMPRRNLTAKGISGPTAAHVIEEIHTPFNLAYVTFTTG
CCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECC
SSAFQNIVGVAHSEIEARCEATRRVMAAIGAKPGDRMFVTYPPLVNVFSKEALDRCGIEW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCEE
FFLERSSRAAFITAFCRERPQIVLGESSFIRASLAEAKQLGLAADLPPSCRIVVAGTPLD
EEEECCCCHHHEEHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
LELIAEVAVQNYQVHDLYGCQEFGWLTLDGKPMRDDLSLVPSPAGEGFCELVVGGLPMGD
HHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHEECCCCCCC
SFPISETGHVCDPAGKIITYRRRRTYPEYEIVVEKTPVASHETIERAARTILRIKSRVVR
CCCCCCCCCCCCCCCCEEEEHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VSRNLQTSCDATELRLVPGAGAETIDPVRLRITGPVKTQAFDDLVKAQLDVQSTSKTDPV
HHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
WAKKR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA