| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750402
Identifier: 86750402
GI number: 86750402
Start: 3762729
End: 3763154
Strand: Reverse
Name: 86750402
Synonym: RPB_3291
Alternate gene names: NA
Gene position: 3763154-3762729 (Counterclockwise)
Preceding gene: 86750403
Following gene: 86750401
Centisome position: 70.58
GC content: 60.8
Gene sequence:
>426_bases ATGGTCATCTATGGTGTGATGGTCCTCGGTCTCTGCATGTTCATCGGCACGTCGATAGGCCTCGGCCTCGGCTTGGCGCT GGGCATTCCCGGGGATATCGGCGGTGTCGGTTTCGCCATGCTGTTGCTGGTGTTCACGACGCCCTGGTTCAAGAAGATGG GCTGGTTTCCGAAGGCGTCGGAAGACGGCATCATGTTCTGGAACGCAATGTACATTCCGGTCGTGATCGCAATGGCCGCC ACTCAGAACGTCGCCGCGGCGATGTCGGGTGGATGGATCGCGTTCATCGCTGGATTGGCGTCGGTCGTGATCTGCTTCGC GTTGATCCGGCCGCTGTCGATCCTCGCCGGATCGAAGACATCGTCGTTCGGCGATGAAGCCGCCGCGCCGACGGAATCGG CAGCAAAGCCCGCTAAGGCAGCTTGA
Upstream 100 bases:
>100_bases ACGCACGAGTTGGCTCGCGCGTGAATGCTGAAGCTTAACCTGAGATCGTGACCGACGCACTGGCTCGATCGGCCGCACTC AGTGTGGGGGAGTAATTGAA
Downstream 100 bases:
>100_bases TCAGGAGCAATGACATGACACATTTCATCAATGACCTGATCGGCCCGCGTCAGCTGATCTTCGCCTTCGTTCTGGTCGGC CTGCTGACCTGGCTGTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: MalonateSodium Symporter Subunit MadL; Malonate Transporter Subunit MadL
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MVIYGVMVLGLCMFIGTSIGLGLGLALGIPGDIGGVGFAMLLLVFTTPWFKKMGWFPKASEDGIMFWNAMYIPVVIAMAA TQNVAAAMSGGWIAFIAGLASVVICFALIRPLSILAGSKTSSFGDEAAAPTESAAKPAKAA
Sequences:
>Translated_141_residues MVIYGVMVLGLCMFIGTSIGLGLGLALGIPGDIGGVGFAMLLLVFTTPWFKKMGWFPKASEDGIMFWNAMYIPVVIAMAA TQNVAAAMSGGWIAFIAGLASVVICFALIRPLSILAGSKTSSFGDEAAAPTESAAKPAKAA >Mature_141_residues MVIYGVMVLGLCMFIGTSIGLGLGLALGIPGDIGGVGFAMLLLVFTTPWFKKMGWFPKASEDGIMFWNAMYIPVVIAMAA TQNVAAAMSGGWIAFIAGLASVVICFALIRPLSILAGSKTSSFGDEAAAPTESAAKPAKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14481; Mature: 14481
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIYGVMVLGLCMFIGTSIGLGLGLALGIPGDIGGVGFAMLLLVFTTPWFKKMGWFPKAS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCC EDGIMFWNAMYIPVVIAMAATQNVAAAMSGGWIAFIAGLASVVICFALIRPLSILAGSKT CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SSFGDEAAAPTESAAKPAKAA CCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MVIYGVMVLGLCMFIGTSIGLGLGLALGIPGDIGGVGFAMLLLVFTTPWFKKMGWFPKAS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCC EDGIMFWNAMYIPVVIAMAATQNVAAAMSGGWIAFIAGLASVVICFALIRPLSILAGSKT CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SSFGDEAAAPTESAAKPAKAA CCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA