Click here to switch to the map view.

The map label for this gene is 86750335

Identifier: 86750335

GI number: 86750335

Start: 3685661

End: 3686437

Strand: Reverse

Name: 86750335

Synonym: RPB_3224

Alternate gene names: NA

Gene position: 3686437-3685661 (Counterclockwise)

Preceding gene: 86750337

Following gene: 86750326

Centisome position: 69.14

GC content: 68.6

Gene sequence:

>777_bases
ATGCGTATCGGCAGCTCGATATCCTATCAGTCCGATCTGACCGCGGTGCAGCTCCTCGCGCGGGCCGGCGCGGCCGGCCG
TGCCGCGAGCGGATCTGCAGCCCCCGGTCCGGTCGGGACCGGCGCGGGCGGCGCTGCGGCGTCCACGCTGCTCACTTATT
CGTCCGCGGGCACGCTGCCGTCGGGGGCGAGCGCGATCGCGATGATCAAGACGATGGCGGCTTCCGGCACCTTCGCCAAT
GCCGCAATGGGCGTCGCCGACGATCAGGTCCGCGCGCTGGTGCGCGACGGCAAGATCGCCCAGCTTCCGCTGCCGAAGGA
TTTTCAAACCGCGGGTCTGAGCACGGCGGAGCAGAACGTCTACCATGTGGTGCAGACGCTGCAGAGCCTGTACGACGCCC
AGCCCAAGACGCTCGACGACGCTCTGGCGGGGCACGTCGCGACCGTGCTCGACTCTTATCCCGAGGCGATCGCGCGGATG
AAGGACGGGCTGGCGAACGGCACGCTGCCGGAGTCCGACGGCTGGAACGACGTCATCGCCCGATACGAGGACGAGCTGTC
GGCCGCGCAGCAGGGCAAAATGAAGATCACCGCGATCGACGATCCGGGCCTGGTGCGGACCACCAACGAATTCAGCGTCT
CGTCCAACGGCATCGGCTGGAGCGGCCGCGGCACGTCGACGACGGCGAACATCCCGGCGCTGCAAGAATTGCTCGGCACC
GGCAACGTGCTGCCCGGCGGCAGCCCGTACACCGGCAGCTACGCCATCAGCTGGTAG

Upstream 100 bases:

>100_bases
CGTTACCGCCCGGCTGGAAATATTCTGCAAACATTGAAAATCCTTATCATTGAATTAACCGACGCCAGAAGATGCTGCAC
GAGATCGCGAGGGCTTCAAG

Downstream 100 bases:

>100_bases
CTGCCGGGCAGGTCCAGAACTCAGGCGAGTTCGATCGGGCCGTGGTCGTCGCAATGGCCGGCGTGCGGATGGTGCAGGCG
GCCGTCGACCAGATAATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRIGSSISYQSDLTAVQLLARAGAAGRAASGSAAPGPVGTGAGGAAASTLLTYSSAGTLPSGASAIAMIKTMAASGTFAN
AAMGVADDQVRALVRDGKIAQLPLPKDFQTAGLSTAEQNVYHVVQTLQSLYDAQPKTLDDALAGHVATVLDSYPEAIARM
KDGLANGTLPESDGWNDVIARYEDELSAAQQGKMKITAIDDPGLVRTTNEFSVSSNGIGWSGRGTSTTANIPALQELLGT
GNVLPGGSPYTGSYAISW

Sequences:

>Translated_258_residues
MRIGSSISYQSDLTAVQLLARAGAAGRAASGSAAPGPVGTGAGGAAASTLLTYSSAGTLPSGASAIAMIKTMAASGTFAN
AAMGVADDQVRALVRDGKIAQLPLPKDFQTAGLSTAEQNVYHVVQTLQSLYDAQPKTLDDALAGHVATVLDSYPEAIARM
KDGLANGTLPESDGWNDVIARYEDELSAAQQGKMKITAIDDPGLVRTTNEFSVSSNGIGWSGRGTSTTANIPALQELLGT
GNVLPGGSPYTGSYAISW
>Mature_258_residues
MRIGSSISYQSDLTAVQLLARAGAAGRAASGSAAPGPVGTGAGGAAASTLLTYSSAGTLPSGASAIAMIKTMAASGTFAN
AAMGVADDQVRALVRDGKIAQLPLPKDFQTAGLSTAEQNVYHVVQTLQSLYDAQPKTLDDALAGHVATVLDSYPEAIARM
KDGLANGTLPESDGWNDVIARYEDELSAAQQGKMKITAIDDPGLVRTTNEFSVSSNGIGWSGRGTSTTANIPALQELLGT
GNVLPGGSPYTGSYAISW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26208; Mature: 26208

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGSSISYQSDLTAVQLLARAGAAGRAASGSAAPGPVGTGAGGAAASTLLTYSSAGTLP
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
SGASAIAMIKTMAASGTFANAAMGVADDQVRALVRDGKIAQLPLPKDFQTAGLSTAEQNV
CCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCHHHHHH
YHVVQTLQSLYDAQPKTLDDALAGHVATVLDSYPEAIARMKDGLANGTLPESDGWNDVIA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RYEDELSAAQQGKMKITAIDDPGLVRTTNEFSVSSNGIGWSGRGTSTTANIPALQELLGT
HHHHHHHHHHCCCEEEEEECCCCCEEECCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHC
GNVLPGGSPYTGSYAISW
CCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MRIGSSISYQSDLTAVQLLARAGAAGRAASGSAAPGPVGTGAGGAAASTLLTYSSAGTLP
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
SGASAIAMIKTMAASGTFANAAMGVADDQVRALVRDGKIAQLPLPKDFQTAGLSTAEQNV
CCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCHHHHHH
YHVVQTLQSLYDAQPKTLDDALAGHVATVLDSYPEAIARMKDGLANGTLPESDGWNDVIA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RYEDELSAAQQGKMKITAIDDPGLVRTTNEFSVSSNGIGWSGRGTSTTANIPALQELLGT
HHHHHHHHHHCCCEEEEEECCCCCEEECCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHC
GNVLPGGSPYTGSYAISW
CCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA