Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86750211

Identifier: 86750211

GI number: 86750211

Start: 3530560

End: 3531654

Strand: Reverse

Name: 86750211

Synonym: RPB_3098

Alternate gene names: NA

Gene position: 3531654-3530560 (Counterclockwise)

Preceding gene: 86750212

Following gene: 86750210

Centisome position: 66.24

GC content: 64.38

Gene sequence:

>1095_bases
ATGCCTGGCCTGAATTTCGGACGAACTCTGGTCGCTGTGGTCGCGAGCGTCGCCGTCTGCCTGGGCGGCGTCGACACCGC
CGCAGCGCTCGAGAAGGTGCGGGTGCTGATCCCGGTGAGGAACATCGACGAGGCGTTCTCACCCTTCGTGGTCGCGAAGG
AGAAGGGCTACTTCGCCGAGGAGGGCCTGGACGTGACCTTGATCGCGGTTGGCGGCTCCAATGAGTCCGCCATTCAAGTC
TCAGCCGGCAATGGCGATGTCGGCGCGGCGTCGCCCGGCGAGGCGCTGGTCGGCATTCAGGCCGGCAAGCTCGACGTGCG
CTATTTCTACAGCCTTTACTATCAGAATATCTGGCACGTCGCCGTGCTGCCGGACAGTCCGATCAAGGCCATCGCCGACC
TCAAGGGCAAGAAGCTCGGCGTGCAGTCGCTCGGCAGCGCCGGCACGACGTTCGGCAAGGCGTTCGTGCAGCAGGCCGGC
CTCGATCCGCAGACAGACGTCGCGTTCCTGCCGGTCGGCGTGGGTGCGCAAGCGGTGACGTCGGTCCGCCAGAAGTTCGT
CGACGCGGTGGTGTATTGGGACGCCGCGCTCGCCAAGTTCAAGTTCTCCGGGCTCGATCTGCGCGAGGTCCCGGCACCGG
AAGGAATCCGTTCGCTACCGGACGTCGGGCTGCTCGCCACCAGCGACACGATCGCCAAGAAGCCGAAGATGCTGATTGGC
GTCTCCCGCGGCGTTGCCAAGGGTTACGACTACTCGATGGCCAATCCGAGGGCCGCAGTGCTGATCACCTGGAAGGCGTA
TCCGGAGGCGAAATCGAAGAATCCCGACCCCGCGGCTGCGCTCGAGGAAGGCATCACCGTCAATCAGGCGCGGCTCCGCA
TCTGGAATTCGCCGAAGACCGAGGATCAGCACGGCCGCCTGATCGAAGCGGATTGGCAGCGCTTGGTCGATTTTTTCGTC
GCCCAGAAGGTGCTGCCGGGGGCAGTTCCGGTGGACCGCGTCATCACCAACCAGTTCGTCAAGGATGCCAACAGCTACGA
CCGCCAGGCGGTGATCGCCGACGCCAAGAAGACAGACGTCTCAAAGCTGGACTGA

Upstream 100 bases:

>100_bases
ACCCGCTACGCCGCGCGCCGCTACATTTTCTGGATCAGGCGCAGCGATGCGCCGGTGATTCCCTGATCGAGCCGTCATCC
ATCCTGCATCGGAGATAGAC

Downstream 100 bases:

>100_bases
CGAGTCGTCGAACGCGCGCGACGCGAGGGACGTGAGCAAGATCTCTCGCGTCCGGGCGGACGGTGCTCTCGACGCATGAT
TGAGGACATGATTGATGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; NMT1/THI5-Like Protein; NMT1/THI5 Like Domain-Containing Protein; WD-40 Repeat Protein; Amino Acid ABC Transporter; UDP-Glucoronosyl And UDP-Glucosyl Transferase

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MPGLNFGRTLVAVVASVAVCLGGVDTAAALEKVRVLIPVRNIDEAFSPFVVAKEKGYFAEEGLDVTLIAVGGSNESAIQV
SAGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHVAVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAG
LDPQTDVAFLPVGVGAQAVTSVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIG
VSRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKTEDQHGRLIEADWQRLVDFFV
AQKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAKKTDVSKLD

Sequences:

>Translated_364_residues
MPGLNFGRTLVAVVASVAVCLGGVDTAAALEKVRVLIPVRNIDEAFSPFVVAKEKGYFAEEGLDVTLIAVGGSNESAIQV
SAGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHVAVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAG
LDPQTDVAFLPVGVGAQAVTSVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIG
VSRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKTEDQHGRLIEADWQRLVDFFV
AQKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAKKTDVSKLD
>Mature_363_residues
PGLNFGRTLVAVVASVAVCLGGVDTAAALEKVRVLIPVRNIDEAFSPFVVAKEKGYFAEEGLDVTLIAVGGSNESAIQVS
AGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHVAVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAGL
DPQTDVAFLPVGVGAQAVTSVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIGV
SRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKTEDQHGRLIEADWQRLVDFFVA
QKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAKKTDVSKLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38756; Mature: 38625

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGLNFGRTLVAVVASVAVCLGGVDTAAALEKVRVLIPVRNIDEAFSPFVVAKEKGYFAE
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCCHHHHCCEEEEECCCCCHH
EGLDVTLIAVGGSNESAIQVSAGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHV
CCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCEEEE
AVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAGLDPQTDVAFLPVGVGAQAVT
EEECCCHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHH
SVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHCCCCCEEECCHHHHHCCCEEEE
VSRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKT
ECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEEEEECCCCC
EDQHGRLIEADWQRLVDFFVAQKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAKKTDV
CCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
SKLD
CCCC
>Mature Secondary Structure 
PGLNFGRTLVAVVASVAVCLGGVDTAAALEKVRVLIPVRNIDEAFSPFVVAKEKGYFAE
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCCHHHHCCEEEEECCCCCHH
EGLDVTLIAVGGSNESAIQVSAGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHV
CCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCEEEE
AVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAGLDPQTDVAFLPVGVGAQAVT
EEECCCHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHH
SVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHCCCCCEEECCHHHHHCCCEEEE
VSRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKT
ECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEEEEECCCCC
EDQHGRLIEADWQRLVDFFVAQKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAKKTDV
CCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
SKLD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA