| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750211
Identifier: 86750211
GI number: 86750211
Start: 3530560
End: 3531654
Strand: Reverse
Name: 86750211
Synonym: RPB_3098
Alternate gene names: NA
Gene position: 3531654-3530560 (Counterclockwise)
Preceding gene: 86750212
Following gene: 86750210
Centisome position: 66.24
GC content: 64.38
Gene sequence:
>1095_bases ATGCCTGGCCTGAATTTCGGACGAACTCTGGTCGCTGTGGTCGCGAGCGTCGCCGTCTGCCTGGGCGGCGTCGACACCGC CGCAGCGCTCGAGAAGGTGCGGGTGCTGATCCCGGTGAGGAACATCGACGAGGCGTTCTCACCCTTCGTGGTCGCGAAGG AGAAGGGCTACTTCGCCGAGGAGGGCCTGGACGTGACCTTGATCGCGGTTGGCGGCTCCAATGAGTCCGCCATTCAAGTC TCAGCCGGCAATGGCGATGTCGGCGCGGCGTCGCCCGGCGAGGCGCTGGTCGGCATTCAGGCCGGCAAGCTCGACGTGCG CTATTTCTACAGCCTTTACTATCAGAATATCTGGCACGTCGCCGTGCTGCCGGACAGTCCGATCAAGGCCATCGCCGACC TCAAGGGCAAGAAGCTCGGCGTGCAGTCGCTCGGCAGCGCCGGCACGACGTTCGGCAAGGCGTTCGTGCAGCAGGCCGGC CTCGATCCGCAGACAGACGTCGCGTTCCTGCCGGTCGGCGTGGGTGCGCAAGCGGTGACGTCGGTCCGCCAGAAGTTCGT CGACGCGGTGGTGTATTGGGACGCCGCGCTCGCCAAGTTCAAGTTCTCCGGGCTCGATCTGCGCGAGGTCCCGGCACCGG AAGGAATCCGTTCGCTACCGGACGTCGGGCTGCTCGCCACCAGCGACACGATCGCCAAGAAGCCGAAGATGCTGATTGGC GTCTCCCGCGGCGTTGCCAAGGGTTACGACTACTCGATGGCCAATCCGAGGGCCGCAGTGCTGATCACCTGGAAGGCGTA TCCGGAGGCGAAATCGAAGAATCCCGACCCCGCGGCTGCGCTCGAGGAAGGCATCACCGTCAATCAGGCGCGGCTCCGCA TCTGGAATTCGCCGAAGACCGAGGATCAGCACGGCCGCCTGATCGAAGCGGATTGGCAGCGCTTGGTCGATTTTTTCGTC GCCCAGAAGGTGCTGCCGGGGGCAGTTCCGGTGGACCGCGTCATCACCAACCAGTTCGTCAAGGATGCCAACAGCTACGA CCGCCAGGCGGTGATCGCCGACGCCAAGAAGACAGACGTCTCAAAGCTGGACTGA
Upstream 100 bases:
>100_bases ACCCGCTACGCCGCGCGCCGCTACATTTTCTGGATCAGGCGCAGCGATGCGCCGGTGATTCCCTGATCGAGCCGTCATCC ATCCTGCATCGGAGATAGAC
Downstream 100 bases:
>100_bases CGAGTCGTCGAACGCGCGCGACGCGAGGGACGTGAGCAAGATCTCTCGCGTCCGGGCGGACGGTGCTCTCGACGCATGAT TGAGGACATGATTGATGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; NMT1/THI5-Like Protein; NMT1/THI5 Like Domain-Containing Protein; WD-40 Repeat Protein; Amino Acid ABC Transporter; UDP-Glucoronosyl And UDP-Glucosyl Transferase
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MPGLNFGRTLVAVVASVAVCLGGVDTAAALEKVRVLIPVRNIDEAFSPFVVAKEKGYFAEEGLDVTLIAVGGSNESAIQV SAGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHVAVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAG LDPQTDVAFLPVGVGAQAVTSVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIG VSRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKTEDQHGRLIEADWQRLVDFFV AQKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAKKTDVSKLD
Sequences:
>Translated_364_residues MPGLNFGRTLVAVVASVAVCLGGVDTAAALEKVRVLIPVRNIDEAFSPFVVAKEKGYFAEEGLDVTLIAVGGSNESAIQV SAGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHVAVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAG LDPQTDVAFLPVGVGAQAVTSVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIG VSRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKTEDQHGRLIEADWQRLVDFFV AQKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAKKTDVSKLD >Mature_363_residues PGLNFGRTLVAVVASVAVCLGGVDTAAALEKVRVLIPVRNIDEAFSPFVVAKEKGYFAEEGLDVTLIAVGGSNESAIQVS AGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHVAVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAGL DPQTDVAFLPVGVGAQAVTSVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIGV SRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKTEDQHGRLIEADWQRLVDFFVA QKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAKKTDVSKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38756; Mature: 38625
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLNFGRTLVAVVASVAVCLGGVDTAAALEKVRVLIPVRNIDEAFSPFVVAKEKGYFAE CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCCHHHHCCEEEEECCCCCHH EGLDVTLIAVGGSNESAIQVSAGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHV CCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCEEEE AVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAGLDPQTDVAFLPVGVGAQAVT EEECCCHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHH SVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIG HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHCCCCCEEECCHHHHHCCCEEEE VSRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKT ECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEEEEECCCCC EDQHGRLIEADWQRLVDFFVAQKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAKKTDV CCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC SKLD CCCC >Mature Secondary Structure PGLNFGRTLVAVVASVAVCLGGVDTAAALEKVRVLIPVRNIDEAFSPFVVAKEKGYFAE CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCCHHHHCCEEEEECCCCCHH EGLDVTLIAVGGSNESAIQVSAGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHV CCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCEEEE AVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAGLDPQTDVAFLPVGVGAQAVT EEECCCHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHH SVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIG HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHCCCCCEEECCHHHHHCCCEEEE VSRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKT ECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEEEEECCCCC EDQHGRLIEADWQRLVDFFVAQKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAKKTDV CCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC SKLD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA