| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750189
Identifier: 86750189
GI number: 86750189
Start: 3504848
End: 3505351
Strand: Reverse
Name: 86750189
Synonym: RPB_3073
Alternate gene names: NA
Gene position: 3505351-3504848 (Counterclockwise)
Preceding gene: 86750190
Following gene: 86750188
Centisome position: 65.75
GC content: 57.94
Gene sequence:
>504_bases GTGAAAACCGCAGCCGCCGTGCTTGGAAGTCTGATTGCCGCCGTCATGATGTTGTCGTTCGCAGCGGTGCCGGCGTGGTC GCAATACGCGGAAAGAACCGTGCAGAAGATCGGTCCATTTACGATCGACAGTATCAACGAGAACGGCCGCTTCGATCGCT GCGCGGCAACTCTCAAGGGCAAGGTCGGCATGTTGCGGATCGCCCAGAATCTCGCCCAGAAATACAGCGTCAGCGTGCCG CCGACGCCGGGACTCAAAGGGCCGATCGCGATGACCATCAGTTTCGATTTCACCCGCAAGAAAAGCTATCCCGGCACTAC CAACGGCATTCGCTCCTGGGCCGTGATCGACATGGCCGGATTTCAGTCGGCTCTGAAGATCAAGAACAACATCCTGATCT CCACCGGCCTGAAGAGCTTTGCATGGCCGATCGGAAACACCTCGATGGAGAGCGTGATGAACGGTCTCGACAGTTGCGTC GCTCGGGCTTCCGGTAATACCTGA
Upstream 100 bases:
>100_bases GATTTCGAAGCGGTGCTTTGGCATACGCTACAGCACATCCCTGATTGTTCACGACCCGCCCTTCGGCGGACGATCGTCCG CATGCACCAGGAGAACTGAA
Downstream 100 bases:
>100_bases TTGTTTCGACCGATCGCGCAATTCCATCAAAGCCCTGCTCGCCGCGGCGCACGCCACACCATCAGTGAAGCTATGAAAAT CATGCTGTTTCGCAATCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKTAAAVLGSLIAAVMMLSFAAVPAWSQYAERTVQKIGPFTIDSINENGRFDRCAATLKGKVGMLRIAQNLAQKYSVSVP PTPGLKGPIAMTISFDFTRKKSYPGTTNGIRSWAVIDMAGFQSALKIKNNILISTGLKSFAWPIGNTSMESVMNGLDSCV ARASGNT
Sequences:
>Translated_167_residues MKTAAAVLGSLIAAVMMLSFAAVPAWSQYAERTVQKIGPFTIDSINENGRFDRCAATLKGKVGMLRIAQNLAQKYSVSVP PTPGLKGPIAMTISFDFTRKKSYPGTTNGIRSWAVIDMAGFQSALKIKNNILISTGLKSFAWPIGNTSMESVMNGLDSCV ARASGNT >Mature_167_residues MKTAAAVLGSLIAAVMMLSFAAVPAWSQYAERTVQKIGPFTIDSINENGRFDRCAATLKGKVGMLRIAQNLAQKYSVSVP PTPGLKGPIAMTISFDFTRKKSYPGTTNGIRSWAVIDMAGFQSALKIKNNILISTGLKSFAWPIGNTSMESVMNGLDSCV ARASGNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17797; Mature: 17797
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAAAVLGSLIAAVMMLSFAAVPAWSQYAERTVQKIGPFTIDSINENGRFDRCAATLKG CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHC KVGMLRIAQNLAQKYSVSVPPTPGLKGPIAMTISFDFTRKKSYPGTTNGIRSWAVIDMAG CHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHEEEHHH FQSALKIKNNILISTGLKSFAWPIGNTSMESVMNGLDSCVARASGNT HHHHHHHHCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTAAAVLGSLIAAVMMLSFAAVPAWSQYAERTVQKIGPFTIDSINENGRFDRCAATLKG CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHC KVGMLRIAQNLAQKYSVSVPPTPGLKGPIAMTISFDFTRKKSYPGTTNGIRSWAVIDMAG CHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHEEEHHH FQSALKIKNNILISTGLKSFAWPIGNTSMESVMNGLDSCVARASGNT HHHHHHHHCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA