Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750154

Identifier: 86750154

GI number: 86750154

Start: 3462685

End: 3463203

Strand: Reverse

Name: 86750154

Synonym: RPB_3037

Alternate gene names: NA

Gene position: 3463203-3462685 (Counterclockwise)

Preceding gene: 86750155

Following gene: 86750153

Centisome position: 64.96

GC content: 62.43

Gene sequence:

>519_bases
ATGACCCTCGATGAATTTCGACGCCTGCTCACGGAATTGACGCTCGCAGCGGAGGCAGCCGATGGCGAGCGCTTCGCCCG
CTGTTTCACCGACGATGGCGTCTACTACGATTACATCTATGGTGTGCATCGCGGTCGCAAGGAGATCGCCCACATGCTGG
TCGAATTGTTCCGGCGCGACGCCGACGATGACTATCGCTGGGAGATGTTCGACCCGGTGTTCGACGGCACCATGGGTTAT
GCTTGGTCGCTGTCGAGCTTCACCTCGCTGGTACCTCAGTTCAAAGGCCGGTTCGTCGTCATCGACGGCATGAGCCGCTT
CGTCGTGCGAGACGGCCTGTTCAGCGAATACCGTGAATCGGTCAATGGCGGCGTCGCGATGCAGCAGCTCGGCGTCGAGC
CCGCGCGGATGGCGAAAATCTTCAATCGCTGGGGTGGCTGGCTGAAAGAGCGGCCGGAAACGGTCGAGTATCTGGCGCGT
CCGCGCGCGCTCGCCGCAAAGGCGCCTCGGCCGCGGTGA

Upstream 100 bases:

>100_bases
ACCGGATCGTTCCGACAGCCCCGCTGCCGCGACGGGTGGTGTCGCGCTTTGCAAATCGTCGATACGATGCCGCGCGATGC
ATTCGAACGTGGAGACCGGG

Downstream 100 bases:

>100_bases
GAATCACAGGCGCCGCAGGCGGCCCTGATTGCCGGCAGCCCGGATCGCGCGGACGCGTTGCCGCGTTCCGTTATGAATAA
AAATCTTCATTTTGGTCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTLDEFRRLLTELTLAAEAADGERFARCFTDDGVYYDYIYGVHRGRKEIAHMLVELFRRDADDDYRWEMFDPVFDGTMGY
AWSLSSFTSLVPQFKGRFVVIDGMSRFVVRDGLFSEYRESVNGGVAMQQLGVEPARMAKIFNRWGGWLKERPETVEYLAR
PRALAAKAPRPR

Sequences:

>Translated_172_residues
MTLDEFRRLLTELTLAAEAADGERFARCFTDDGVYYDYIYGVHRGRKEIAHMLVELFRRDADDDYRWEMFDPVFDGTMGY
AWSLSSFTSLVPQFKGRFVVIDGMSRFVVRDGLFSEYRESVNGGVAMQQLGVEPARMAKIFNRWGGWLKERPETVEYLAR
PRALAAKAPRPR
>Mature_171_residues
TLDEFRRLLTELTLAAEAADGERFARCFTDDGVYYDYIYGVHRGRKEIAHMLVELFRRDADDDYRWEMFDPVFDGTMGYA
WSLSSFTSLVPQFKGRFVVIDGMSRFVVRDGLFSEYRESVNGGVAMQQLGVEPARMAKIFNRWGGWLKERPETVEYLARP
RALAAKAPRPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19941; Mature: 19810

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDEFRRLLTELTLAAEAADGERFARCFTDDGVYYDYIYGVHRGRKEIAHMLVELFRRD
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
ADDDYRWEMFDPVFDGTMGYAWSLSSFTSLVPQFKGRFVVIDGMSRFVVRDGLFSEYRES
CCCCCCHHHHCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHH
VNGGVAMQQLGVEPARMAKIFNRWGGWLKERPETVEYLARPRALAAKAPRPR
HCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure 
TLDEFRRLLTELTLAAEAADGERFARCFTDDGVYYDYIYGVHRGRKEIAHMLVELFRRD
CHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
ADDDYRWEMFDPVFDGTMGYAWSLSSFTSLVPQFKGRFVVIDGMSRFVVRDGLFSEYRES
CCCCCCHHHHCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHH
VNGGVAMQQLGVEPARMAKIFNRWGGWLKERPETVEYLARPRALAAKAPRPR
HCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA