| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750154
Identifier: 86750154
GI number: 86750154
Start: 3462685
End: 3463203
Strand: Reverse
Name: 86750154
Synonym: RPB_3037
Alternate gene names: NA
Gene position: 3463203-3462685 (Counterclockwise)
Preceding gene: 86750155
Following gene: 86750153
Centisome position: 64.96
GC content: 62.43
Gene sequence:
>519_bases ATGACCCTCGATGAATTTCGACGCCTGCTCACGGAATTGACGCTCGCAGCGGAGGCAGCCGATGGCGAGCGCTTCGCCCG CTGTTTCACCGACGATGGCGTCTACTACGATTACATCTATGGTGTGCATCGCGGTCGCAAGGAGATCGCCCACATGCTGG TCGAATTGTTCCGGCGCGACGCCGACGATGACTATCGCTGGGAGATGTTCGACCCGGTGTTCGACGGCACCATGGGTTAT GCTTGGTCGCTGTCGAGCTTCACCTCGCTGGTACCTCAGTTCAAAGGCCGGTTCGTCGTCATCGACGGCATGAGCCGCTT CGTCGTGCGAGACGGCCTGTTCAGCGAATACCGTGAATCGGTCAATGGCGGCGTCGCGATGCAGCAGCTCGGCGTCGAGC CCGCGCGGATGGCGAAAATCTTCAATCGCTGGGGTGGCTGGCTGAAAGAGCGGCCGGAAACGGTCGAGTATCTGGCGCGT CCGCGCGCGCTCGCCGCAAAGGCGCCTCGGCCGCGGTGA
Upstream 100 bases:
>100_bases ACCGGATCGTTCCGACAGCCCCGCTGCCGCGACGGGTGGTGTCGCGCTTTGCAAATCGTCGATACGATGCCGCGCGATGC ATTCGAACGTGGAGACCGGG
Downstream 100 bases:
>100_bases GAATCACAGGCGCCGCAGGCGGCCCTGATTGCCGGCAGCCCGGATCGCGCGGACGCGTTGCCGCGTTCCGTTATGAATAA AAATCTTCATTTTGGTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTLDEFRRLLTELTLAAEAADGERFARCFTDDGVYYDYIYGVHRGRKEIAHMLVELFRRDADDDYRWEMFDPVFDGTMGY AWSLSSFTSLVPQFKGRFVVIDGMSRFVVRDGLFSEYRESVNGGVAMQQLGVEPARMAKIFNRWGGWLKERPETVEYLAR PRALAAKAPRPR
Sequences:
>Translated_172_residues MTLDEFRRLLTELTLAAEAADGERFARCFTDDGVYYDYIYGVHRGRKEIAHMLVELFRRDADDDYRWEMFDPVFDGTMGY AWSLSSFTSLVPQFKGRFVVIDGMSRFVVRDGLFSEYRESVNGGVAMQQLGVEPARMAKIFNRWGGWLKERPETVEYLAR PRALAAKAPRPR >Mature_171_residues TLDEFRRLLTELTLAAEAADGERFARCFTDDGVYYDYIYGVHRGRKEIAHMLVELFRRDADDDYRWEMFDPVFDGTMGYA WSLSSFTSLVPQFKGRFVVIDGMSRFVVRDGLFSEYRESVNGGVAMQQLGVEPARMAKIFNRWGGWLKERPETVEYLARP RALAAKAPRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19941; Mature: 19810
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDEFRRLLTELTLAAEAADGERFARCFTDDGVYYDYIYGVHRGRKEIAHMLVELFRRD CCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ADDDYRWEMFDPVFDGTMGYAWSLSSFTSLVPQFKGRFVVIDGMSRFVVRDGLFSEYRES CCCCCCHHHHCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHH VNGGVAMQQLGVEPARMAKIFNRWGGWLKERPETVEYLARPRALAAKAPRPR HCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHCCCCCCC >Mature Secondary Structure TLDEFRRLLTELTLAAEAADGERFARCFTDDGVYYDYIYGVHRGRKEIAHMLVELFRRD CHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ADDDYRWEMFDPVFDGTMGYAWSLSSFTSLVPQFKGRFVVIDGMSRFVVRDGLFSEYRES CCCCCCHHHHCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHH VNGGVAMQQLGVEPARMAKIFNRWGGWLKERPETVEYLARPRALAAKAPRPR HCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA