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The map label for this gene is glxA [H]

Identifier: 86750147

GI number: 86750147

Start: 3453442

End: 3454380

Strand: Reverse

Name: glxA [H]

Synonym: RPB_3030

Alternate gene names: 86750147

Gene position: 3454380-3453442 (Counterclockwise)

Preceding gene: 86750149

Following gene: 86750143

Centisome position: 64.79

GC content: 71.46

Gene sequence:

>939_bases
ATGATCGGCGTATTGATCTATCCCGATTTCCAGTTGCTCGACGCGGCCGGTCCGATCGCCGCGTTCGAAATCGCCGGCCG
CTACGCGCGCAATACCGAGCCGATCAGAACCATCGCCGCCACGCCCGGTGCGGTACGGAGTTCGTCCGGCGTCGAGATGC
TGGCGCGCGGATTGCGGCACGACCGGGCGATGCGGACGCTGATCATCGCCGGAGGCGACGGGGTGCGCGCGGCCGCCGGC
TGCTCCCGGACGCTGGCGTTCCTGAGGGCCGCGGCAGCGCGCGGCTGCCGCATCGCCAGTGTCTGTTCGGGCGCATACTT
GCTCGCCGAGGCCGGGCTGCTCGACGGTCGGCGTGCGACCACGCATTGGAGTCGCACCCGCGATTTCCTCGAGCGCTATC
CGCGGGTGCGGCTGGAGCCGGACCGAATCTTCGTCCGCGACGGCGAGGTCTGGACCTCGGCCGGGATCAGCGCCGGCATC
GACCTGGCGCTGGCGATCATCGCCGAGCAGCATTCCGACGCCATCGCGCGCGACACCGCGCGGCAATTGGTGCTGGCACA
GCGCCGCGCCGGTGGGCAGTCGCAATTCTCATCGTTGCTGGAGCTGCAGGCGCCGTCCGGACGGTTCGCGGCCTTGCTCG
GCTGGGTGCGCGAACATCTCGGCGAACACCTCACCGTCGAGCGGCTGGCCGAGCAGGCCGGCATGAGCGCGCGACATTTC
ACCCGCGCCTTCATCGCCGAGACCGGGTCGACGCCGGCGAAAGCGGTGGAGCGGCTGCGGGTCGAGGCGGCGAAGAGCCG
CGTGCAGGCGTCCGGCGAAGCGATCGAGCAGGTCGCAAGGACGACCGGCTTCGGCGATCCGGAGCGGATGCGCCGCGCCT
TCCTTCGCGCCTTCGGCCAGCCGCCGCAGGCGTTGCGCCGGGCGGCGCGGGCGGCCTGA

Upstream 100 bases:

>100_bases
GCTTGACGAGGCGATCCTGGCATGGTCGGCTGATGTCCGAAATGGCATATATCCCTCGATTTCAGACAAGAGGTCGCGTG
GACCATCGGCGGAGGGGGCG

Downstream 100 bases:

>100_bases
TCAGGCCGCCGACGGCGTTGCGATGTGTCGCCGGACCTGCGCTGCGCCGGCGTGCAGCCATTCGGCGTCGTCATTGACCA
CCGTCATCGCCTCGGTCAGT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MIGVLIYPDFQLLDAAGPIAAFEIAGRYARNTEPIRTIAATPGAVRSSSGVEMLARGLRHDRAMRTLIIAGGDGVRAAAG
CSRTLAFLRAAAARGCRIASVCSGAYLLAEAGLLDGRRATTHWSRTRDFLERYPRVRLEPDRIFVRDGEVWTSAGISAGI
DLALAIIAEQHSDAIARDTARQLVLAQRRAGGQSQFSSLLELQAPSGRFAALLGWVREHLGEHLTVERLAEQAGMSARHF
TRAFIAETGSTPAKAVERLRVEAAKSRVQASGEAIEQVARTTGFGDPERMRRAFLRAFGQPPQALRRAARAA

Sequences:

>Translated_312_residues
MIGVLIYPDFQLLDAAGPIAAFEIAGRYARNTEPIRTIAATPGAVRSSSGVEMLARGLRHDRAMRTLIIAGGDGVRAAAG
CSRTLAFLRAAAARGCRIASVCSGAYLLAEAGLLDGRRATTHWSRTRDFLERYPRVRLEPDRIFVRDGEVWTSAGISAGI
DLALAIIAEQHSDAIARDTARQLVLAQRRAGGQSQFSSLLELQAPSGRFAALLGWVREHLGEHLTVERLAEQAGMSARHF
TRAFIAETGSTPAKAVERLRVEAAKSRVQASGEAIEQVARTTGFGDPERMRRAFLRAFGQPPQALRRAARAA
>Mature_312_residues
MIGVLIYPDFQLLDAAGPIAAFEIAGRYARNTEPIRTIAATPGAVRSSSGVEMLARGLRHDRAMRTLIIAGGDGVRAAAG
CSRTLAFLRAAAARGCRIASVCSGAYLLAEAGLLDGRRATTHWSRTRDFLERYPRVRLEPDRIFVRDGEVWTSAGISAGI
DLALAIIAEQHSDAIARDTARQLVLAQRRAGGQSQFSSLLELQAPSGRFAALLGWVREHLGEHLTVERLAEQAGMSARHF
TRAFIAETGSTPAKAVERLRVEAAKSRVQASGEAIEQVARTTGFGDPERMRRAFLRAFGQPPQALRRAARAA

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 33681; Mature: 33681

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVLIYPDFQLLDAAGPIAAFEIAGRYARNTEPIRTIAATPGAVRSSSGVEMLARGLRH
CEEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCHHHHHHHHHH
DRAMRTLIIAGGDGVRAAAGCSRTLAFLRAAAARGCRIASVCSGAYLLAEAGLLDGRRAT
HHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCCCCCCCCH
THWSRTRDFLERYPRVRLEPDRIFVRDGEVWTSAGISAGIDLALAIIAEQHSDAIARDTA
HHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RQLVLAQRRAGGQSQFSSLLELQAPSGRFAALLGWVREHLGEHLTVERLAEQAGMSARHF
HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
TRAFIAETGSTPAKAVERLRVEAAKSRVQASGEAIEQVARTTGFGDPERMRRAFLRAFGQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PPQALRRAARAA
CHHHHHHHHCCC
>Mature Secondary Structure
MIGVLIYPDFQLLDAAGPIAAFEIAGRYARNTEPIRTIAATPGAVRSSSGVEMLARGLRH
CEEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCHHHHHHHHHH
DRAMRTLIIAGGDGVRAAAGCSRTLAFLRAAAARGCRIASVCSGAYLLAEAGLLDGRRAT
HHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCCCCCCCCH
THWSRTRDFLERYPRVRLEPDRIFVRDGEVWTSAGISAGIDLALAIIAEQHSDAIARDTA
HHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RQLVLAQRRAGGQSQFSSLLELQAPSGRFAALLGWVREHLGEHLTVERLAEQAGMSARHF
HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
TRAFIAETGSTPAKAVERLRVEAAKSRVQASGEAIEQVARTTGFGDPERMRRAFLRAFGQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PPQALRRAARAA
CHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]