Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is crcB1 [H]

Identifier: 86750065

GI number: 86750065

Start: 3359331

End: 3360143

Strand: Reverse

Name: crcB1 [H]

Synonym: RPB_2948

Alternate gene names: 86750065

Gene position: 3360143-3359331 (Counterclockwise)

Preceding gene: 86750066

Following gene: 86750064

Centisome position: 63.02

GC content: 61.75

Gene sequence:

>813_bases
ATGACAGATCGTAGAATTCCCGATTGGGCGATGCGCGCATGGGAGCGCTTCACGCTCTATGGCCTCATTGCATTGGGCAG
CGTCATCGGCGGGTTGTCGCGGTACCTCGTCGGCGTTGCGCAATTGGCGCTCGTCGGCCCACCCTTTCCGTGGGCGATCC
TGTTCGTCAACGTCACCGGATCTTTCATTATCGGCTTTTATGCCACCCTGACCGGGCCCGACGGGCGGATCTTTGCGGGG
ACACGCCAACGCCAATTCGTGATGACCGGAATCTGTGGGGGCTATACGACCTTCTCGGGATTCAGCCTCGACACGCTCCA
GTTGATCCATCATGGCCATCGCGCCGCCGCATTGGCCAATGTCGCCGCATCTCCGGTCGCGTGGCTGATTGCCGTCTGGG
TCGGATACGCCGTTGCGACAAGGCTGAACCGCTTGCGAACCGTGGCTGCGACAGGAGCGGAGGCTGAGAATCTCCAGATC
CCCCGTCACGCGACGCTGCTGCGGATTTTCGTCGACGAATCCGACCAACACGACGGTATGCCGCTCTACGAGGCGATCGT
GCTGAAGGCCCGTGAAATGCAGCTGGCCGGTGCCACCGTATTTCGCGGACCTGCCGGCTATGGGCAGTCCAGCCAGATGC
ATCTGGCAAACGCCCTCGGCGTTCCGGACACTCTCCCCCTGATCATCGAGATCATCGACGGCGAAGATGCTGTTTCGCGT
TTTCTGCCCGCACTCGACGAGATGATGCCCGGCGGGATGGTGACGATGGAGAAGGTTGAAGTCCTGCAGTATGGACGGCC
GGCCGGCCGCTAG

Upstream 100 bases:

>100_bases
CTTGATCCTATGTCTCGGCCTTGCCGCTATCGGTTTTATGCTCGCAACCGGGGATCTGCCGTGATTGCCATTCCAGCCGC
CCGGAAACGGCAGTTTCGTC

Downstream 100 bases:

>100_bases
CGGCGCGAGCAGGCAAGACGTGTTCGATGACCAATGCCGGTCCGAGCGAACCAATAGGACGAGTTCGATGCAACTACCTC
GTGATGCCGTACTTCTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTDRRIPDWAMRAWERFTLYGLIALGSVIGGLSRYLVGVAQLALVGPPFPWAILFVNVTGSFIIGFYATLTGPDGRIFAG
TRQRQFVMTGICGGYTTFSGFSLDTLQLIHHGHRAAALANVAASPVAWLIAVWVGYAVATRLNRLRTVAATGAEAENLQI
PRHATLLRIFVDESDQHDGMPLYEAIVLKAREMQLAGATVFRGPAGYGQSSQMHLANALGVPDTLPLIIEIIDGEDAVSR
FLPALDEMMPGGMVTMEKVEVLQYGRPAGR

Sequences:

>Translated_270_residues
MTDRRIPDWAMRAWERFTLYGLIALGSVIGGLSRYLVGVAQLALVGPPFPWAILFVNVTGSFIIGFYATLTGPDGRIFAG
TRQRQFVMTGICGGYTTFSGFSLDTLQLIHHGHRAAALANVAASPVAWLIAVWVGYAVATRLNRLRTVAATGAEAENLQI
PRHATLLRIFVDESDQHDGMPLYEAIVLKAREMQLAGATVFRGPAGYGQSSQMHLANALGVPDTLPLIIEIIDGEDAVSR
FLPALDEMMPGGMVTMEKVEVLQYGRPAGR
>Mature_269_residues
TDRRIPDWAMRAWERFTLYGLIALGSVIGGLSRYLVGVAQLALVGPPFPWAILFVNVTGSFIIGFYATLTGPDGRIFAGT
RQRQFVMTGICGGYTTFSGFSLDTLQLIHHGHRAAALANVAASPVAWLIAVWVGYAVATRLNRLRTVAATGAEAENLQIP
RHATLLRIFVDESDQHDGMPLYEAIVLKAREMQLAGATVFRGPAGYGQSSQMHLANALGVPDTLPLIIEIIDGEDAVSRF
LPALDEMMPGGMVTMEKVEVLQYGRPAGR

Specific function: Unknown

COG id: COG1993

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CrcB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003691 [H]

Pfam domain/function: PF02537 CRCB [H]

EC number: NA

Molecular weight: Translated: 29257; Mature: 29126

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRRIPDWAMRAWERFTLYGLIALGSVIGGLSRYLVGVAQLALVGPPFPWAILFVNVTG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
SFIIGFYATLTGPDGRIFAGTRQRQFVMTGICGGYTTFSGFSLDTLQLIHHGHRAAALAN
CEEEEEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHH
VAASPVAWLIAVWVGYAVATRLNRLRTVAATGAEAENLQIPRHATLLRIFVDESDQHDGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCCCC
PLYEAIVLKAREMQLAGATVFRGPAGYGQSSQMHLANALGVPDTLPLIIEIIDGEDAVSR
HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHH
FLPALDEMMPGGMVTMEKVEVLQYGRPAGR
HHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDRRIPDWAMRAWERFTLYGLIALGSVIGGLSRYLVGVAQLALVGPPFPWAILFVNVTG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
SFIIGFYATLTGPDGRIFAGTRQRQFVMTGICGGYTTFSGFSLDTLQLIHHGHRAAALAN
CEEEEEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHH
VAASPVAWLIAVWVGYAVATRLNRLRTVAATGAEAENLQIPRHATLLRIFVDESDQHDGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCCCC
PLYEAIVLKAREMQLAGATVFRGPAGYGQSSQMHLANALGVPDTLPLIIEIIDGEDAVSR
HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHH
FLPALDEMMPGGMVTMEKVEVLQYGRPAGR
HHHHHHHHCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA