| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is crcB1 [H]
Identifier: 86750065
GI number: 86750065
Start: 3359331
End: 3360143
Strand: Reverse
Name: crcB1 [H]
Synonym: RPB_2948
Alternate gene names: 86750065
Gene position: 3360143-3359331 (Counterclockwise)
Preceding gene: 86750066
Following gene: 86750064
Centisome position: 63.02
GC content: 61.75
Gene sequence:
>813_bases ATGACAGATCGTAGAATTCCCGATTGGGCGATGCGCGCATGGGAGCGCTTCACGCTCTATGGCCTCATTGCATTGGGCAG CGTCATCGGCGGGTTGTCGCGGTACCTCGTCGGCGTTGCGCAATTGGCGCTCGTCGGCCCACCCTTTCCGTGGGCGATCC TGTTCGTCAACGTCACCGGATCTTTCATTATCGGCTTTTATGCCACCCTGACCGGGCCCGACGGGCGGATCTTTGCGGGG ACACGCCAACGCCAATTCGTGATGACCGGAATCTGTGGGGGCTATACGACCTTCTCGGGATTCAGCCTCGACACGCTCCA GTTGATCCATCATGGCCATCGCGCCGCCGCATTGGCCAATGTCGCCGCATCTCCGGTCGCGTGGCTGATTGCCGTCTGGG TCGGATACGCCGTTGCGACAAGGCTGAACCGCTTGCGAACCGTGGCTGCGACAGGAGCGGAGGCTGAGAATCTCCAGATC CCCCGTCACGCGACGCTGCTGCGGATTTTCGTCGACGAATCCGACCAACACGACGGTATGCCGCTCTACGAGGCGATCGT GCTGAAGGCCCGTGAAATGCAGCTGGCCGGTGCCACCGTATTTCGCGGACCTGCCGGCTATGGGCAGTCCAGCCAGATGC ATCTGGCAAACGCCCTCGGCGTTCCGGACACTCTCCCCCTGATCATCGAGATCATCGACGGCGAAGATGCTGTTTCGCGT TTTCTGCCCGCACTCGACGAGATGATGCCCGGCGGGATGGTGACGATGGAGAAGGTTGAAGTCCTGCAGTATGGACGGCC GGCCGGCCGCTAG
Upstream 100 bases:
>100_bases CTTGATCCTATGTCTCGGCCTTGCCGCTATCGGTTTTATGCTCGCAACCGGGGATCTGCCGTGATTGCCATTCCAGCCGC CCGGAAACGGCAGTTTCGTC
Downstream 100 bases:
>100_bases CGGCGCGAGCAGGCAAGACGTGTTCGATGACCAATGCCGGTCCGAGCGAACCAATAGGACGAGTTCGATGCAACTACCTC GTGATGCCGTACTTCTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTDRRIPDWAMRAWERFTLYGLIALGSVIGGLSRYLVGVAQLALVGPPFPWAILFVNVTGSFIIGFYATLTGPDGRIFAG TRQRQFVMTGICGGYTTFSGFSLDTLQLIHHGHRAAALANVAASPVAWLIAVWVGYAVATRLNRLRTVAATGAEAENLQI PRHATLLRIFVDESDQHDGMPLYEAIVLKAREMQLAGATVFRGPAGYGQSSQMHLANALGVPDTLPLIIEIIDGEDAVSR FLPALDEMMPGGMVTMEKVEVLQYGRPAGR
Sequences:
>Translated_270_residues MTDRRIPDWAMRAWERFTLYGLIALGSVIGGLSRYLVGVAQLALVGPPFPWAILFVNVTGSFIIGFYATLTGPDGRIFAG TRQRQFVMTGICGGYTTFSGFSLDTLQLIHHGHRAAALANVAASPVAWLIAVWVGYAVATRLNRLRTVAATGAEAENLQI PRHATLLRIFVDESDQHDGMPLYEAIVLKAREMQLAGATVFRGPAGYGQSSQMHLANALGVPDTLPLIIEIIDGEDAVSR FLPALDEMMPGGMVTMEKVEVLQYGRPAGR >Mature_269_residues TDRRIPDWAMRAWERFTLYGLIALGSVIGGLSRYLVGVAQLALVGPPFPWAILFVNVTGSFIIGFYATLTGPDGRIFAGT RQRQFVMTGICGGYTTFSGFSLDTLQLIHHGHRAAALANVAASPVAWLIAVWVGYAVATRLNRLRTVAATGAEAENLQIP RHATLLRIFVDESDQHDGMPLYEAIVLKAREMQLAGATVFRGPAGYGQSSQMHLANALGVPDTLPLIIEIIDGEDAVSRF LPALDEMMPGGMVTMEKVEVLQYGRPAGR
Specific function: Unknown
COG id: COG1993
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 29257; Mature: 29126
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRRIPDWAMRAWERFTLYGLIALGSVIGGLSRYLVGVAQLALVGPPFPWAILFVNVTG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC SFIIGFYATLTGPDGRIFAGTRQRQFVMTGICGGYTTFSGFSLDTLQLIHHGHRAAALAN CEEEEEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHH VAASPVAWLIAVWVGYAVATRLNRLRTVAATGAEAENLQIPRHATLLRIFVDESDQHDGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCCCC PLYEAIVLKAREMQLAGATVFRGPAGYGQSSQMHLANALGVPDTLPLIIEIIDGEDAVSR HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHH FLPALDEMMPGGMVTMEKVEVLQYGRPAGR HHHHHHHHCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure TDRRIPDWAMRAWERFTLYGLIALGSVIGGLSRYLVGVAQLALVGPPFPWAILFVNVTG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC SFIIGFYATLTGPDGRIFAGTRQRQFVMTGICGGYTTFSGFSLDTLQLIHHGHRAAALAN CEEEEEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHH VAASPVAWLIAVWVGYAVATRLNRLRTVAATGAEAENLQIPRHATLLRIFVDESDQHDGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCCCC PLYEAIVLKAREMQLAGATVFRGPAGYGQSSQMHLANALGVPDTLPLIIEIIDGEDAVSR HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHH FLPALDEMMPGGMVTMEKVEVLQYGRPAGR HHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA