| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is coaD
Identifier: 86749991
GI number: 86749991
Start: 3270912
End: 3271409
Strand: Reverse
Name: coaD
Synonym: RPB_2874
Alternate gene names: 86749991
Gene position: 3271409-3270912 (Counterclockwise)
Preceding gene: 86749993
Following gene: 86749990
Centisome position: 61.36
GC content: 66.87
Gene sequence:
>498_bases ATGTCCCGTATCGCGCTGTATCCCGGCTCCTTCGACCCCGTCACCAACGGCCATCTCGACGTCGTCCGCCACGCGGTCGA ATTGTGCGACAGGCTGGTGGTGGCGATCGGCATCCACCCCGGCAAGAAGCCGCTGTTCACCACCGAGGAGCGGCTGGTGA TGGTGCGACGCGTGTTCGAGCCGGTCGCCGAGGCCGCCGGCTGTGCGTTCGATTGCACCACCTACGACAATCTCACGGTC ACCGCGGCGCAGCAGGTCGGCGCGTCGCTGATGATCCGCGGGCTGCGCGACGGCACTGATCTCGACTACGAAATGCAGAT CGCCGGCATGAACGAGACCATGGCGCCGGGGGTCCACACGGTGTTTTTGCCGGCGTCGGTCGGCGTGCGCCCGATCACCG CCACACTGGTGCGGCAGATCGCTGCGATGGGCGGCGACGTCTCCGCCTTCGTGCCGCCCGATGTCGCGGCCAGTCTGAAA TCGAAATTCGCCGGCTAG
Upstream 100 bases:
>100_bases AGGTGGCCTTCCGGTTCGATCCGCAGAGCGAAATAAAACCCCGGACAGGGCCGGAACCAGATCGGCTTGCGGGCGTCATG CGGCCGCGCTAGACGGAAGC
Downstream 100 bases:
>100_bases CCGGCTTTTGCAATCCGGAGTTTCCATGATCCGTTTGATAGGCATCATCGCCGCGCTGGTGTTCGCTCTGCCCGCGCTGG CGCAGCCGCTGCCCGCCGGC
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSRIALYPGSFDPVTNGHLDVVRHAVELCDRLVVAIGIHPGKKPLFTTEERLVMVRRVFEPVAEAAGCAFDCTTYDNLTV TAAQQVGASLMIRGLRDGTDLDYEMQIAGMNETMAPGVHTVFLPASVGVRPITATLVRQIAAMGGDVSAFVPPDVAASLK SKFAG
Sequences:
>Translated_165_residues MSRIALYPGSFDPVTNGHLDVVRHAVELCDRLVVAIGIHPGKKPLFTTEERLVMVRRVFEPVAEAAGCAFDCTTYDNLTV TAAQQVGASLMIRGLRDGTDLDYEMQIAGMNETMAPGVHTVFLPASVGVRPITATLVRQIAAMGGDVSAFVPPDVAASLK SKFAG >Mature_164_residues SRIALYPGSFDPVTNGHLDVVRHAVELCDRLVVAIGIHPGKKPLFTTEERLVMVRRVFEPVAEAAGCAFDCTTYDNLTVT AAQQVGASLMIRGLRDGTDLDYEMQIAGMNETMAPGVHTVFLPASVGVRPITATLVRQIAAMGGDVSAFVPPDVAASLKS KFAG
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=164, Percent_Identity=38.4146341463415, Blast_Score=130, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_RHOP2 (Q2IW34)
Other databases:
- EMBL: CP000250 - RefSeq: YP_486487.1 - HSSP: Q9WZK0 - ProteinModelPortal: Q2IW34 - SMR: Q2IW34 - STRING: Q2IW34 - GeneID: 3910668 - GenomeReviews: CP000250_GR - KEGG: rpb:RPB_2874 - eggNOG: COG0669 - HOGENOM: HBG288308 - OMA: VRQIAAM - ProtClustDB: PRK00168 - BioCyc: RPAL316058:RPB_2874-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 17559; Mature: 17427
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIALYPGSFDPVTNGHLDVVRHAVELCDRLVVAIGIHPGKKPLFTTEERLVMVRRVFE CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHH PVAEAAGCAFDCTTYDNLTVTAAQQVGASLMIRGLRDGTDLDYEMQIAGMNETMAPGVHT HHHHHCCCEEECCCCCCEEEEHHHHHCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEE VFLPASVGVRPITATLVRQIAAMGGDVSAFVPPDVAASLKSKFAG EEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCC >Mature Secondary Structure SRIALYPGSFDPVTNGHLDVVRHAVELCDRLVVAIGIHPGKKPLFTTEERLVMVRRVFE CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHH PVAEAAGCAFDCTTYDNLTVTAAQQVGASLMIRGLRDGTDLDYEMQIAGMNETMAPGVHT HHHHHCCCEEECCCCCCEEEEHHHHHCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEE VFLPASVGVRPITATLVRQIAAMGGDVSAFVPPDVAASLKSKFAG EEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA