| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749984
Identifier: 86749984
GI number: 86749984
Start: 3266263
End: 3266505
Strand: Reverse
Name: 86749984
Synonym: RPB_2867
Alternate gene names: NA
Gene position: 3266505-3266263 (Counterclockwise)
Preceding gene: 86749986
Following gene: 86749982
Centisome position: 61.27
GC content: 67.49
Gene sequence:
>243_bases ATGTCTCAGCCGCCACGCCGCCCGCGCACATTGAACGATGCCCGCACCGAAGCTGAAGCCGCCTTCAAGAAGGCGACCAC CAAGCCCGTCGAGGCGCCGGTGGTTCAGAGGCGTGCGCTTCCCGGCGTCAAGGAAATGGTCTCGCTGCGGATCGATCAGG ACGTGCTCGAGCACTTCCAGGGCGATGGTCCCGGCTGGCAGGAGCGCATCAACGCCGCGCTGCGCAAGGCCGCGGGGCTG TAG
Upstream 100 bases:
>100_bases TTACCGCGTCTCGTCAAGTCATCGTGAAACCTCGTCGCGCTGCGTATTCCGTGCTCGTTCCGTCCGTCGTTCCGACTCAA GACTCATCGAAGAGGACCTC
Downstream 100 bases:
>100_bases GGGCCTGTCGAGCGCTGTGGGGCCGTCTCACGTCTTGCTGGGTGCGACGGTGGCCGATCGGGCGGTGCGCAGGTTGAGCA GGTTTCCGGCGAGAATCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSQPPRRPRTLNDARTEAEAAFKKATTKPVEAPVVQRRALPGVKEMVSLRIDQDVLEHFQGDGPGWQERINAALRKAAGL
Sequences:
>Translated_80_residues MSQPPRRPRTLNDARTEAEAAFKKATTKPVEAPVVQRRALPGVKEMVSLRIDQDVLEHFQGDGPGWQERINAALRKAAGL >Mature_79_residues SQPPRRPRTLNDARTEAEAAFKKATTKPVEAPVVQRRALPGVKEMVSLRIDQDVLEHFQGDGPGWQERINAALRKAAGL
Specific function: Unknown
COG id: COG3514
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8874; Mature: 8743
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPPRRPRTLNDARTEAEAAFKKATTKPVEAPVVQRRALPGVKEMVSLRIDQDVLEHFQ CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHC GDGPGWQERINAALRKAAGL CCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SQPPRRPRTLNDARTEAEAAFKKATTKPVEAPVVQRRALPGVKEMVSLRIDQDVLEHFQ CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHC GDGPGWQERINAALRKAAGL CCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA