| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is qor [H]
Identifier: 86749958
GI number: 86749958
Start: 3234820
End: 3235794
Strand: Reverse
Name: qor [H]
Synonym: RPB_2841
Alternate gene names: 86749958
Gene position: 3235794-3234820 (Counterclockwise)
Preceding gene: 86749959
Following gene: 86749955
Centisome position: 60.69
GC content: 65.13
Gene sequence:
>975_bases ATGACGAAAGCGGTGCGGGTGCATCAGGTGGGCGGTCCGGAGGCGTTGGTCTACGAGGCCATCGAACTGGCGCCGCCCGG CGATGGTGAAGTCCGCATCCGCCAGCACGCCGTCGGCCTGAACTTCATCGACGTGTACTTCCGCACCGGCCTGTACAAGG CGCCGACGATGCCGTTCATCGCTGGCAATGAAGCGGCGGGCGAGGTGATCGCGGTCGGGCCGCACGTCACCAATTTTCAC CCCGGCGATCGCGTCGCATATTATTCGAATCTCGGCGGCTACGCCACCGAGCGCAACATCGAAGCCGCCAAGCTGGTGAA GCTGCCGGATCACATCACCTATGAGCAGGGCGCGGTGCTGATGCTCAAGGGACTGACGGTGTGGTACCTGCTGCACAAGA CCTTCAAGGTCGAGCCGGGTCACCGCGTGCTGATCCACGCCGCCGCCGGCGGCATCGGATTGCTCGCCTGCCAATGGGCG CGGGCGCTCGGCGCGCACGTCATCGGCACCGTCGGCTCCAAGGCCAAGGCCGATCTCGCGCTCGCCAATGGCTGCGATCA CGTCATCCTCTACAACGAGGAGGATTTCGTCGCGCGGGTGAAGCAGATCAGCCGCAACGAGCTCTGCGACGTGGTTTATG ACGGCGTCGGCAAGACCACGTTCCCGGGGTCGCTGTCCTGTATCAAGCCGCGCGGGCTGTTCGTCTCGTTCGGCAACGCC TCGGGCCCGGTGCCGCCATTCGCGCTGGCCGAGCTCAACAACCACGGCTCGCTGTTCGCGACGCGGCCGAAGCTCAACGA CTATGTCAGCACCCGCAAGGAGCTGATGGAAGGCGCCGACACGCTGTTCTCGGCGGTGATCGAGGGCAAGCTGCACGTCC CGATCAACCACGCCTACGCGCTGAAGGACGCCGCCAAGGCGCATATCGATCTGGAAGGGCGTGTGACGACCGGGGCGTCG ATTCTGAAGCCGTAG
Upstream 100 bases:
>100_bases GCGGCCCATCGCTTGTTTGCGGCGCGGTCCGGCGCGGTCGGTTGACAACGCGGCGAGGATGGCCTTCGGTTGGCTTGCGT AAATTCCTAAGGGGGCGATG
Downstream 100 bases:
>100_bases TCGCTACGCGGCGCCGTCATCCTGAGGCGCTCGCCCGCAGGGCGAGCCTCGAAGGATGCTGGTAAACGCACGCGCGGCCC ATCCTTCGAGGCCGTCGCTG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTKAVRVHQVGGPEALVYEAIELAPPGDGEVRIRQHAVGLNFIDVYFRTGLYKAPTMPFIAGNEAAGEVIAVGPHVTNFH PGDRVAYYSNLGGYATERNIEAAKLVKLPDHITYEQGAVLMLKGLTVWYLLHKTFKVEPGHRVLIHAAAGGIGLLACQWA RALGAHVIGTVGSKAKADLALANGCDHVILYNEEDFVARVKQISRNELCDVVYDGVGKTTFPGSLSCIKPRGLFVSFGNA SGPVPPFALAELNNHGSLFATRPKLNDYVSTRKELMEGADTLFSAVIEGKLHVPINHAYALKDAAKAHIDLEGRVTTGAS ILKP
Sequences:
>Translated_324_residues MTKAVRVHQVGGPEALVYEAIELAPPGDGEVRIRQHAVGLNFIDVYFRTGLYKAPTMPFIAGNEAAGEVIAVGPHVTNFH PGDRVAYYSNLGGYATERNIEAAKLVKLPDHITYEQGAVLMLKGLTVWYLLHKTFKVEPGHRVLIHAAAGGIGLLACQWA RALGAHVIGTVGSKAKADLALANGCDHVILYNEEDFVARVKQISRNELCDVVYDGVGKTTFPGSLSCIKPRGLFVSFGNA SGPVPPFALAELNNHGSLFATRPKLNDYVSTRKELMEGADTLFSAVIEGKLHVPINHAYALKDAAKAHIDLEGRVTTGAS ILKP >Mature_323_residues TKAVRVHQVGGPEALVYEAIELAPPGDGEVRIRQHAVGLNFIDVYFRTGLYKAPTMPFIAGNEAAGEVIAVGPHVTNFHP GDRVAYYSNLGGYATERNIEAAKLVKLPDHITYEQGAVLMLKGLTVWYLLHKTFKVEPGHRVLIHAAAGGIGLLACQWAR ALGAHVIGTVGSKAKADLALANGCDHVILYNEEDFVARVKQISRNELCDVVYDGVGKTTFPGSLSCIKPRGLFVSFGNAS GPVPPFALAELNNHGSLFATRPKLNDYVSTRKELMEGADTLFSAVIEGKLHVPINHAYALKDAAKAHIDLEGRVTTGASI LKP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=326, Percent_Identity=30.3680981595092, Blast_Score=144, Evalue=7e-35, Organism=Homo sapiens, GI13236495, Length=326, Percent_Identity=30.3680981595092, Blast_Score=144, Evalue=7e-35, Organism=Homo sapiens, GI194239676, Length=206, Percent_Identity=35.9223300970874, Blast_Score=131, Evalue=8e-31, Organism=Homo sapiens, GI18379349, Length=213, Percent_Identity=33.8028169014084, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI24308257, Length=240, Percent_Identity=29.5833333333333, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI22538446, Length=331, Percent_Identity=28.3987915407855, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI22538444, Length=331, Percent_Identity=28.3987915407855, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI28557745, Length=228, Percent_Identity=32.0175438596491, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI67078404, Length=190, Percent_Identity=30.5263157894737, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI67078406, Length=163, Percent_Identity=30.6748466257669, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI156627571, Length=219, Percent_Identity=31.0502283105023, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI197927207, Length=187, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI47519420, Length=213, Percent_Identity=30.5164319248826, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1790485, Length=329, Percent_Identity=48.936170212766, Blast_Score=304, Evalue=6e-84, Organism=Caenorhabditis elegans, GI17507255, Length=312, Percent_Identity=26.6025641025641, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17556000, Length=262, Percent_Identity=28.2442748091603, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6319520, Length=324, Percent_Identity=33.9506172839506, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6319621, Length=324, Percent_Identity=23.7654320987654, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34810; Mature: 34679
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAVRVHQVGGPEALVYEAIELAPPGDGEVRIRQHAVGLNFIDVYFRTGLYKAPTMPFI CCCCEEEEECCCCHHEEEEHHCCCCCCCCCEEEEEEECCCHHEEHHHHCCCCCCCCCCEE AGNEAAGEVIAVGPHVTNFHPGDRVAYYSNLGGYATERNIEAAKLVKLPDHITYEQGAVL ECCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEECCCCEE MLKGLTVWYLLHKTFKVEPGHRVLIHAAAGGIGLLACQWARALGAHVIGTVGSKAKADLA EEHHHHHEEHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEE LANGCDHVILYNEEDFVARVKQISRNELCDVVYDGVGKTTFPGSLSCIKPRGLFVSFGNA EECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEECCC SGPVPPFALAELNNHGSLFATRPKLNDYVSTRKELMEGADTLFSAVIEGKLHVPINHAYA CCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH LKDAAKAHIDLEGRVTTGASILKP HHHHHHHEEEECCEEECCCHHCCC >Mature Secondary Structure TKAVRVHQVGGPEALVYEAIELAPPGDGEVRIRQHAVGLNFIDVYFRTGLYKAPTMPFI CCCEEEEECCCCHHEEEEHHCCCCCCCCCEEEEEEECCCHHEEHHHHCCCCCCCCCCEE AGNEAAGEVIAVGPHVTNFHPGDRVAYYSNLGGYATERNIEAAKLVKLPDHITYEQGAVL ECCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEECCCCEE MLKGLTVWYLLHKTFKVEPGHRVLIHAAAGGIGLLACQWARALGAHVIGTVGSKAKADLA EEHHHHHEEHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEE LANGCDHVILYNEEDFVARVKQISRNELCDVVYDGVGKTTFPGSLSCIKPRGLFVSFGNA EECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEECCC SGPVPPFALAELNNHGSLFATRPKLNDYVSTRKELMEGADTLFSAVIEGKLHVPINHAYA CCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH LKDAAKAHIDLEGRVTTGASILKP HHHHHHHEEEECCEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]