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The map label for this gene is ssuC [C]

Identifier: 86749954

GI number: 86749954

Start: 3230070

End: 3230870

Strand: Reverse

Name: ssuC [C]

Synonym: RPB_2837

Alternate gene names: 86749954

Gene position: 3230870-3230070 (Counterclockwise)

Preceding gene: 86749955

Following gene: 86749953

Centisome position: 60.6

GC content: 65.42

Gene sequence:

>801_bases
ATGCGCGGCCGCTCTTTCGCCGTGAGGCTGCGCAGCATCGCACTTGCCGTCGTGGTGCCGTTCGGCCTGCTGCTGTTGTG
GGACGTGCTGGTGCGCTGGACCGGCACGCGGCTGGTGCCGCCGCCGTCCGGCGTCGCGGTGATGATGTGGGATTTCGCCT
TCGGCGGAATCTACGACGATGCCTATAGCGGCAGCCTGCCGATCCATTTCTGGAAATCGGTGCAGCGGGTCTATGGCGGC
TTCTTCCTGGCCGCGCTGGTCGGCATCCCACTGGGGCTGATGATCGGCCGGATTCCGCTGCTGCGCGCGATGCTCGATCC
GACGCTGTCGCTGTTGCGGCCGATCCCGGTCACCGCGTGGCTGCCGCTGTCGATGATCTTCTTCGGGCTCGGTCCGAAAT
CGGCGGTGTTCCTGGTGTTCCTCGGCGCGTTCTATCCGATCCTGCTGAACACGATTTTCGGGGTGAAATCCGTCGATGCC
CGGCTGTTCGAGGCGGCCGGCATGCTGGGCTGCCGCGGCCCGCAATTGTTCCGCGCGGTGGTGCTGCCGGCGGCGTTGCC
CAGCATCTTCAACGGCCTGCGGTTGGGCGCTTCCTTCGCCTGGATCCTGATCGTGGTCGGCGAGATGACCGGCGTGCCGG
AAGGGCTCGGCGCGGTCATCATGGACGGCCGCACGCTGTCGCGCACCGACCTCGTCATCACCGGCATGATCATCATCGGC
ATCACCGGATTCCTCTCCGATCGCATTCTGGTGGCGCTCAGCAATTACTTCCTTCGCTGGAGTCCGCAGCATCATGCTTG
A

Upstream 100 bases:

>100_bases
GAGTCTCGACGGCGCGATCTCCCGGCCTGATCTCGGCGGAGCCGGAGCGACGACGCCGGTCGCCGCGGCTCCGGTCGCGG
CCGGCCGGACCCAACCGCGG

Downstream 100 bases:

>100_bases
ATCAACGACCAGAAGCGGGCCGCCGCCCGTGATCCTCGAGGTCAGCGACCTCAACAAGATCTACGAGGCCTCGAACGGTC
CGGTGATGGCGCTGCGGGGC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRGRSFAVRLRSIALAVVVPFGLLLLWDVLVRWTGTRLVPPPSGVAVMMWDFAFGGIYDDAYSGSLPIHFWKSVQRVYGG
FFLAALVGIPLGLMIGRIPLLRAMLDPTLSLLRPIPVTAWLPLSMIFFGLGPKSAVFLVFLGAFYPILLNTIFGVKSVDA
RLFEAAGMLGCRGPQLFRAVVLPAALPSIFNGLRLGASFAWILIVVGEMTGVPEGLGAVIMDGRTLSRTDLVITGMIIIG
ITGFLSDRILVALSNYFLRWSPQHHA

Sequences:

>Translated_266_residues
MRGRSFAVRLRSIALAVVVPFGLLLLWDVLVRWTGTRLVPPPSGVAVMMWDFAFGGIYDDAYSGSLPIHFWKSVQRVYGG
FFLAALVGIPLGLMIGRIPLLRAMLDPTLSLLRPIPVTAWLPLSMIFFGLGPKSAVFLVFLGAFYPILLNTIFGVKSVDA
RLFEAAGMLGCRGPQLFRAVVLPAALPSIFNGLRLGASFAWILIVVGEMTGVPEGLGAVIMDGRTLSRTDLVITGMIIIG
ITGFLSDRILVALSNYFLRWSPQHHA
>Mature_266_residues
MRGRSFAVRLRSIALAVVVPFGLLLLWDVLVRWTGTRLVPPPSGVAVMMWDFAFGGIYDDAYSGSLPIHFWKSVQRVYGG
FFLAALVGIPLGLMIGRIPLLRAMLDPTLSLLRPIPVTAWLPLSMIFFGLGPKSAVFLVFLGAFYPILLNTIFGVKSVDA
RLFEAAGMLGCRGPQLFRAVVLPAALPSIFNGLRLGASFAWILIVVGEMTGVPEGLGAVIMDGRTLSRTDLVITGMIIIG
ITGFLSDRILVALSNYFLRWSPQHHA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=249, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1786564, Length=222, Percent_Identity=36.036036036036, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1789033, Length=168, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28929; Mature: 28929

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]