| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86749952
Identifier: 86749952
GI number: 86749952
Start: 3228403
End: 3229257
Strand: Reverse
Name: 86749952
Synonym: RPB_2835
Alternate gene names: NA
Gene position: 3229257-3228403 (Counterclockwise)
Preceding gene: 86749953
Following gene: 86749948
Centisome position: 60.57
GC content: 67.25
Gene sequence:
>855_bases TTGACCGCAACTGCGCACGACACGACGACGGCGATCTTTCGCGGCATGGATCGCGCGACGCTGGACGCGGCCTACAACAA CAGCGAGGCCGTCGCCGATAGTCCGAACTGGCTGGAGCAGTGGCGCGCACGTAGCGCTGTCCGGCGCGCCGCCCCGCACG CCCGGCTGGATCTCGCTTACGGCGACAAGGAGCGGACGTCGCTCGACTACTTCGCCGCCGGCGTTTCCGGCGCGCCGTTG CTGGTGTTCCTGCACGGCGGCTATTGGCAGCGCAACAGCAAGGAGATGTTCTCCTTTGTGGCCGACGGGCCGAATGCGCG TGGCGTCGATGTCGCGGTGGTCGGCTACACGCTGGCGCCGGCCGCGCGATTGTCCGAGATCGTCGGCGAGATCGACGCGG CGCTGGATTTTCTCGTCGCCGATACCGGCGGGTTCGACTTCGACCGGCGACGGGTCGTCGTCGGTGGCTGGTCCGCCGGC GGACATCTGGCATCGGTGGCCAGCGCCCGTCCAATGGTCAGCGGTGCGCTGTGCATCAGCGGCATCTTTGATCTGGAGCC GATCGCGCTGTGCTATCTCAACGATCTGCTGCGACTGGACCGGCGGGAAATCGAACAACTGAGCCCGCTTCGCCGCATCC ATGCCGGCGCGGCGCCGCAATGTCTCGTGGTAGGCGGCGACGAATTGCCCGAGTTGCGGCGGCAATCCGCGGACTACGCC GAGGTCGCGAGCCGCTTCGGACTGCCGATCCGGTCACGGACGCTGCCCGGGCATCATCACTTTTCGATGCTGGACGAACT GGCCGGCTCCGACGGCGCCTTGACTACCGAACTGCTGAGCCTGCTCGGCGAGTAG
Upstream 100 bases:
>100_bases GCATCGCTGGAGTTCAACACCCTGCGTCGCGACGTGACGAAGCGATTGACCAGCCATATCGGCGGCGGACGGCGGGTCGC GGCAACGGCGGATTCCTGAA
Downstream 100 bases:
>100_bases CAGACCCGCATCACGATCGGGCGAATGGCGCGACCGTGATGCCGTTGGCCTCGAGCGCCGTCCTGACGCCGCGTGCGATG TCGACGGCGCCGGCGGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase/Lipase/Thioesterase; Esterase/Lipase-Like Protein; Arylformamidase; Esterase/Lipase; N-Acetylanthranilate Amidase; Lipase/Esterase; Lipase; Esterase/Lipase/Thioesterase Family Protein; Esterase/Lipase/Thiestherase Protein; Aylformamidase; Hydrolase; Kynurenine Formamidase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Domain-Containing Protein; Carboxylesterase; Carboxylesterase Family Protein; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Alpha/Beta Hydrolase Fold-3 Domain Protein
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTATAHDTTTAIFRGMDRATLDAAYNNSEAVADSPNWLEQWRARSAVRRAAPHARLDLAYGDKERTSLDYFAAGVSGAPL LVFLHGGYWQRNSKEMFSFVADGPNARGVDVAVVGYTLAPAARLSEIVGEIDAALDFLVADTGGFDFDRRRVVVGGWSAG GHLASVASARPMVSGALCISGIFDLEPIALCYLNDLLRLDRREIEQLSPLRRIHAGAAPQCLVVGGDELPELRRQSADYA EVASRFGLPIRSRTLPGHHHFSMLDELAGSDGALTTELLSLLGE
Sequences:
>Translated_284_residues MTATAHDTTTAIFRGMDRATLDAAYNNSEAVADSPNWLEQWRARSAVRRAAPHARLDLAYGDKERTSLDYFAAGVSGAPL LVFLHGGYWQRNSKEMFSFVADGPNARGVDVAVVGYTLAPAARLSEIVGEIDAALDFLVADTGGFDFDRRRVVVGGWSAG GHLASVASARPMVSGALCISGIFDLEPIALCYLNDLLRLDRREIEQLSPLRRIHAGAAPQCLVVGGDELPELRRQSADYA EVASRFGLPIRSRTLPGHHHFSMLDELAGSDGALTTELLSLLGE >Mature_283_residues TATAHDTTTAIFRGMDRATLDAAYNNSEAVADSPNWLEQWRARSAVRRAAPHARLDLAYGDKERTSLDYFAAGVSGAPLL VFLHGGYWQRNSKEMFSFVADGPNARGVDVAVVGYTLAPAARLSEIVGEIDAALDFLVADTGGFDFDRRRVVVGGWSAGG HLASVASARPMVSGALCISGIFDLEPIALCYLNDLLRLDRREIEQLSPLRRIHAGAAPQCLVVGGDELPELRRQSADYAE VASRFGLPIRSRTLPGHHHFSMLDELAGSDGALTTELLSLLGE
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI192807282, Length=249, Percent_Identity=29.718875502008, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI224465228, Length=259, Percent_Identity=29.7297297297297, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17539512, Length=222, Percent_Identity=27.027027027027, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI19920830, Length=240, Percent_Identity=27.0833333333333, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30623; Mature: 30492
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATAHDTTTAIFRGMDRATLDAAYNNSEAVADSPNWLEQWRARSAVRRAAPHARLDLAY CCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE GDKERTSLDYFAAGVSGAPLLVFLHGGYWQRNSKEMFSFVADGPNARGVDVAVVGYTLAP CCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEHHCC AARLSEIVGEIDAALDFLVADTGGFDFDRRRVVVGGWSAGGHLASVASARPMVSGALCIS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHH GIFDLEPIALCYLNDLLRLDRREIEQLSPLRRIHAGAAPQCLVVGGDELPELRRQSADYA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCHH EVASRFGLPIRSRTLPGHHHFSMLDELAGSDGALTTELLSLLGE HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure TATAHDTTTAIFRGMDRATLDAAYNNSEAVADSPNWLEQWRARSAVRRAAPHARLDLAY CCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE GDKERTSLDYFAAGVSGAPLLVFLHGGYWQRNSKEMFSFVADGPNARGVDVAVVGYTLAP CCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEHHCC AARLSEIVGEIDAALDFLVADTGGFDFDRRRVVVGGWSAGGHLASVASARPMVSGALCIS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHH GIFDLEPIALCYLNDLLRLDRREIEQLSPLRRIHAGAAPQCLVVGGDELPELRRQSADYA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCHH EVASRFGLPIRSRTLPGHHHFSMLDELAGSDGALTTELLSLLGE HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA