| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749889
Identifier: 86749889
GI number: 86749889
Start: 3160468
End: 3160785
Strand: Reverse
Name: 86749889
Synonym: RPB_2772
Alternate gene names: NA
Gene position: 3160785-3160468 (Counterclockwise)
Preceding gene: 86749890
Following gene: 86749888
Centisome position: 59.28
GC content: 65.41
Gene sequence:
>318_bases ATGGTCACCCGGAGCCGCCTCAAATCGATCCTTGCCGGCGTCGCGCTGTACGCGATCGCGGCGGCGGCGATCGCGTATTT CGGGATCAACGCCTATACCGGGCGCTACGGGCTCACGGCGCAGCAGGAGCTCGACCAGGAGATCATCGCACTGACCTCTG AACTGGTGCGGCTGAAACACGAGCGTGCCGAGGGCGAAAAGCGCGTGGCGCTGCTGCGGTCGGATCGCCTCGACCCGGAC ATGCTCGATGAGCGTGTGCGCTATCAGCTCGACTTCGCCAATCCGGCCGATCTGGTGCGGATGCATCCGCAGCGCTGA
Upstream 100 bases:
>100_bases ACCTATATCGATGCCTTCGCCGCCTGGGTGGCGCAGCAGCACAAATAGGCGGCAGGCGGGCGTTAGCGCTGCATTAACCG CGCTGTCGCATGGTCGATCC
Downstream 100 bases:
>100_bases TCCGCATATTCCAAAAACCCACACAAACGATGTCGAAAATTACGCTTCGTTGCAGTGCGGCAAACTGAATTGCGTGTTGC GGCGCGCGGCTCCTTTCACG
Product: septum formation initiator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MVTRSRLKSILAGVALYAIAAAAIAYFGINAYTGRYGLTAQQELDQEIIALTSELVRLKHERAEGEKRVALLRSDRLDPD MLDERVRYQLDFANPADLVRMHPQR
Sequences:
>Translated_105_residues MVTRSRLKSILAGVALYAIAAAAIAYFGINAYTGRYGLTAQQELDQEIIALTSELVRLKHERAEGEKRVALLRSDRLDPD MLDERVRYQLDFANPADLVRMHPQR >Mature_105_residues MVTRSRLKSILAGVALYAIAAAAIAYFGINAYTGRYGLTAQQELDQEIIALTSELVRLKHERAEGEKRVALLRSDRLDPD MLDERVRYQLDFANPADLVRMHPQR
Specific function: Unknown
COG id: COG2919
COG function: function code D; Septum formation initiator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11887; Mature: 11887
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRSRLKSILAGVALYAIAAAAIAYFGINAYTGRYGLTAQQELDQEIIALTSELVRLKH CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ERAEGEKRVALLRSDRLDPDMLDERVRYQLDFANPADLVRMHPQR HHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCC >Mature Secondary Structure MVTRSRLKSILAGVALYAIAAAAIAYFGINAYTGRYGLTAQQELDQEIIALTSELVRLKH CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ERAEGEKRVALLRSDRLDPDMLDERVRYQLDFANPADLVRMHPQR HHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA