Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is nagZ [H]

Identifier: 86749865

GI number: 86749865

Start: 3131522

End: 3132547

Strand: Reverse

Name: nagZ [H]

Synonym: RPB_2748

Alternate gene names: 86749865

Gene position: 3132547-3131522 (Counterclockwise)

Preceding gene: 86749866

Following gene: 86749864

Centisome position: 58.75

GC content: 65.89

Gene sequence:

>1026_bases
ATGAGTTCGCGCGCCTTCATCACCGGGATATCCGGCCTTGGCCTCACAGACGACGAGCGCGGATTTATCCGTGAATCGCG
TCCGTGGGGTTTCATCCTGTTCAAGCGCAACGTCGACAATCCGGCGCAAGTTTCCGGATTGGTTCAGCAATTGCGCACCG
AGGTGGGCCAGCCGGACGCCCCGGTCCTGATCGATCAAGAGGGCGGGCGGGTGCAGCGGCTCGGCCCGCCGCATTGGCCG
GTATATCCGCGCGGCGCGCTGTTCTCGGCACTTTACGATATTGATTCGCAGCTCGGCCTCGCAGCGGCGCGTCTCAGCGC
CCGGCTGATCGCGTCCGACCTGTTCGATCTCGGCATCACCGTCGACTGCTTGCCGCTGGCCGACGTGCCGGTTTCGGGCG
CCGATGCCGTGATCGGCGATCGCGCCTATGGCTTCGCGGCCGCCAAGGTGGCGGCGATCGCCCGTGCGGTCACCGAGGGC
CTGGAGCAGGGCTCCGTGCTGCCGGTTCTCAAACATATCCCCGGCCACGGACGTGCCACTGCAGACAGCCATTTCCGCCT
GCCGACGGTCGATACGTCGCGAGACGAGCTCGAACGCACCGATTTCTCCGCGTTCCAGCCGCTCGCCGATCTGCCGATGG
CGATGACCGCACATGTTGTGTTTAGCGCCCTCGATCCCGCCCAACCCGCGACCACTTCTGCGACAATCATCGATCAGGTG
ATTCGCGGACGAATCGGGTTCCAGGGACTGCTGATGAGCGACGACGTCTCGATGAATGCGCTGGAGGGCACGATTGCGGA
GCGCGCGCGCGCGAGCATCGCGGCGGGCTGCGACATCGTCCTGCATTGTAACGGTAAGCTCGACGAAATGCGGCAGGTGG
CCTCCGAGGCCCCGGAATTGACCGGGCTGGCGCTGCAACGCGCTACGGCGGCGCTGGCGTCGCGCAAGCCGCCGCAACCG
CTCGATCGCCGCGCTGCGCGCGCCGAACTCGAAACCTTGATTCTCCGCGCAGGAACGAGCGCATGA

Upstream 100 bases:

>100_bases
CTGCGGCAACCTGAAAAGTGCCGGCGGACAGTGCGTCGTCCAGAGGAATTAACGCCCGTTTCCTTGACCCTGGAGGCGCG
CGCGGGCTAAGCGGCCTTGT

Downstream 100 bases:

>100_bases
CCGCTGAAATTCTGCAGTTCGACACTGGGCGGCCCGCTGAGCAGGTCGACCAGGACGAGGCGCTCGTCATCGACGTCGAG
GGCTATGAAGGCCCGCTCGA

Product: Beta-N-acetylhexosaminidase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSSRAFITGISGLGLTDDERGFIRESRPWGFILFKRNVDNPAQVSGLVQQLRTEVGQPDAPVLIDQEGGRVQRLGPPHWP
VYPRGALFSALYDIDSQLGLAAARLSARLIASDLFDLGITVDCLPLADVPVSGADAVIGDRAYGFAAAKVAAIARAVTEG
LEQGSVLPVLKHIPGHGRATADSHFRLPTVDTSRDELERTDFSAFQPLADLPMAMTAHVVFSALDPAQPATTSATIIDQV
IRGRIGFQGLLMSDDVSMNALEGTIAERARASIAAGCDIVLHCNGKLDEMRQVASEAPELTGLALQRATAALASRKPPQP
LDRRAARAELETLILRAGTSA

Sequences:

>Translated_341_residues
MSSRAFITGISGLGLTDDERGFIRESRPWGFILFKRNVDNPAQVSGLVQQLRTEVGQPDAPVLIDQEGGRVQRLGPPHWP
VYPRGALFSALYDIDSQLGLAAARLSARLIASDLFDLGITVDCLPLADVPVSGADAVIGDRAYGFAAAKVAAIARAVTEG
LEQGSVLPVLKHIPGHGRATADSHFRLPTVDTSRDELERTDFSAFQPLADLPMAMTAHVVFSALDPAQPATTSATIIDQV
IRGRIGFQGLLMSDDVSMNALEGTIAERARASIAAGCDIVLHCNGKLDEMRQVASEAPELTGLALQRATAALASRKPPQP
LDRRAARAELETLILRAGTSA
>Mature_340_residues
SSRAFITGISGLGLTDDERGFIRESRPWGFILFKRNVDNPAQVSGLVQQLRTEVGQPDAPVLIDQEGGRVQRLGPPHWPV
YPRGALFSALYDIDSQLGLAAARLSARLIASDLFDLGITVDCLPLADVPVSGADAVIGDRAYGFAAAKVAAIARAVTEGL
EQGSVLPVLKHIPGHGRATADSHFRLPTVDTSRDELERTDFSAFQPLADLPMAMTAHVVFSALDPAQPATTSATIIDQVI
RGRIGFQGLLMSDDVSMNALEGTIAERARASIAAGCDIVLHCNGKLDEMRQVASEAPELTGLALQRATAALASRKPPQPL
DRRAARAELETLILRAGTSA

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=282, Percent_Identity=36.1702127659575, Blast_Score=152, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 36259; Mature: 36128

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRAFITGISGLGLTDDERGFIRESRPWGFILFKRNVDNPAQVSGLVQQLRTEVGQPDA
CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
PVLIDQEGGRVQRLGPPHWPVYPRGALFSALYDIDSQLGLAAARLSARLIASDLFDLGIT
CEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VDCLPLADVPVSGADAVIGDRAYGFAAAKVAAIARAVTEGLEQGSVLPVLKHIPGHGRAT
EEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCCC
ADSHFRLPTVDTSRDELERTDFSAFQPLADLPMAMTAHVVFSALDPAQPATTSATIIDQV
CCCCEECCCCCCCHHHHHHCCHHHHCHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IRGRIGFQGLLMSDDVSMNALEGTIAERARASIAAGCDIVLHCNGKLDEMRQVASEAPEL
HHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCH
TGLALQRATAALASRKPPQPLDRRAARAELETLILRAGTSA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSRAFITGISGLGLTDDERGFIRESRPWGFILFKRNVDNPAQVSGLVQQLRTEVGQPDA
CCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
PVLIDQEGGRVQRLGPPHWPVYPRGALFSALYDIDSQLGLAAARLSARLIASDLFDLGIT
CEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VDCLPLADVPVSGADAVIGDRAYGFAAAKVAAIARAVTEGLEQGSVLPVLKHIPGHGRAT
EEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCCC
ADSHFRLPTVDTSRDELERTDFSAFQPLADLPMAMTAHVVFSALDPAQPATTSATIIDQV
CCCCEECCCCCCCHHHHHHCCHHHHCHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IRGRIGFQGLLMSDDVSMNALEGTIAERARASIAAGCDIVLHCNGKLDEMRQVASEAPEL
HHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCH
TGLALQRATAALASRKPPQPLDRRAARAELETLILRAGTSA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA