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The map label for this gene is viuB [H]

Identifier: 86749816

GI number: 86749816

Start: 3084476

End: 3085390

Strand: Direct

Name: viuB [H]

Synonym: RPB_2699

Alternate gene names: 86749816

Gene position: 3084476-3085390 (Clockwise)

Preceding gene: 86749815

Following gene: 86749818

Centisome position: 57.85

GC content: 68.52

Gene sequence:

>915_bases
ATGACGATTGCGACCGCCACCAGGGCGGCCCCTCGGCGTTTCCGGGATGTCCGGGTGCTCGAGGTCATTCGGACCGAATT
GCTGACGCCGCGGATGCGGCGCGTGACGCTCGGCGGCGAAGAACTCGCGGGCTACAGCGACGGTCCCAACATCAAGCTGC
TGGTGCCGCCGCCCGGCGTTGAGCCGGAATGGCCGATGGCCGGCGAGCGCGGCAAGCCGATCTGGCCGGCGCCCGACAAG
TGCCCGGCGCTGCGCACCTACAGCCTGCGGCGTTACGATCCGGTGCGTGGCGAGATCGACGTCGATTTCGTCATGCATGG
CCTCGGCGTGGCGTCACGCTGGGCGGCCCACGCCAAGCCCGGCGATCTGCTCGGCGTCGGCATTCCGGCCGGCCTCACCG
TCGCAGCAGCCGACTGGTATCTGCTGGTCGGCGACCACACTGCGCTGCCGGCGATCGCGCGGATCATGGAGCAATTGCCG
CCGACCGCGAAAGGCCGCGCCTTCATCGAGGTGCCGGATGCGTCCGACCAGCAGCCGATCGCCTGCCGCGCCGATATCGA
GCTGACCTGGCTGCATCTCGACGGCACCTCGGCCGGTGAATCGACGCTGCTGGCGGATGCGGTGCTCGGCATGGACTGGC
CGTCTCCGGAGAACGGCTTCGTCTGGATCGGCTGTGAATCCGCCACCGTCCGCAAACTTCGCGCCCATGTCCGCAAGGAG
CGCGGCTTCGGCGCGCGGCAGGTGCTGGCGATCGGCTACTGGCGGCGCGGCATGAGCGAGCCCGCCTACGCCGACGCCTT
CCACAACGATCGCGACGCGGAATATTTCGCGATGCTGAAGGAGCAGCATCACGGCGAGCCTCATGATCACGATCACGATC
ATGAGGAGCATGATCACGGCGGCCCTCCCGGCTGA

Upstream 100 bases:

>100_bases
CGCGGATCGAGCCGGGGCCGGAAGGACGGCCCCACATCATCATCGACGACGTGTTGCCGTCGCCGGGGCAGTCCCGGCCG
CGGAAGAGGAGTGCGTGACC

Downstream 100 bases:

>100_bases
CGCGGGGGCCGGCCCGCCCGACCGACGCAGCGCGGGGGATCGCGCCACAAGACGCCGCCGGCGCCACATTGCATGGTCGC
CGGCGGGCATTCATGCGCGG

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTIATATRAAPRRFRDVRVLEVIRTELLTPRMRRVTLGGEELAGYSDGPNIKLLVPPPGVEPEWPMAGERGKPIWPAPDK
CPALRTYSLRRYDPVRGEIDVDFVMHGLGVASRWAAHAKPGDLLGVGIPAGLTVAAADWYLLVGDHTALPAIARIMEQLP
PTAKGRAFIEVPDASDQQPIACRADIELTWLHLDGTSAGESTLLADAVLGMDWPSPENGFVWIGCESATVRKLRAHVRKE
RGFGARQVLAIGYWRRGMSEPAYADAFHNDRDAEYFAMLKEQHHGEPHDHDHDHEEHDHGGPPG

Sequences:

>Translated_304_residues
MTIATATRAAPRRFRDVRVLEVIRTELLTPRMRRVTLGGEELAGYSDGPNIKLLVPPPGVEPEWPMAGERGKPIWPAPDK
CPALRTYSLRRYDPVRGEIDVDFVMHGLGVASRWAAHAKPGDLLGVGIPAGLTVAAADWYLLVGDHTALPAIARIMEQLP
PTAKGRAFIEVPDASDQQPIACRADIELTWLHLDGTSAGESTLLADAVLGMDWPSPENGFVWIGCESATVRKLRAHVRKE
RGFGARQVLAIGYWRRGMSEPAYADAFHNDRDAEYFAMLKEQHHGEPHDHDHDHEEHDHGGPPG
>Mature_303_residues
TIATATRAAPRRFRDVRVLEVIRTELLTPRMRRVTLGGEELAGYSDGPNIKLLVPPPGVEPEWPMAGERGKPIWPAPDKC
PALRTYSLRRYDPVRGEIDVDFVMHGLGVASRWAAHAKPGDLLGVGIPAGLTVAAADWYLLVGDHTALPAIARIMEQLPP
TAKGRAFIEVPDASDQQPIACRADIELTWLHLDGTSAGESTLLADAVLGMDWPSPENGFVWIGCESATVRKLRAHVRKER
GFGARQVLAIGYWRRGMSEPAYADAFHNDRDAEYFAMLKEQHHGEPHDHDHDHEEHDHGGPPG

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=255, Percent_Identity=31.7647058823529, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 33506; Mature: 33375

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIATATRAAPRRFRDVRVLEVIRTELLTPRMRRVTLGGEELAGYSDGPNIKLLVPPPGV
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCEEEEECCCCC
EPEWPMAGERGKPIWPAPDKCPALRTYSLRRYDPVRGEIDVDFVMHGLGVASRWAAHAKP
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHHCHHHHHHCCCCC
GDLLGVGIPAGLTVAAADWYLLVGDHTALPAIARIMEQLPPTAKGRAFIEVPDASDQQPI
CCEEEECCCCCCEEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCE
ACRADIELTWLHLDGTSAGESTLLADAVLGMDWPSPENGFVWIGCESATVRKLRAHVRKE
EEEECEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
RGFGARQVLAIGYWRRGMSEPAYADAFHNDRDAEYFAMLKEQHHGEPHDHDHDHEEHDHG
CCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GPPG
CCCC
>Mature Secondary Structure 
TIATATRAAPRRFRDVRVLEVIRTELLTPRMRRVTLGGEELAGYSDGPNIKLLVPPPGV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCEEEEECCCCC
EPEWPMAGERGKPIWPAPDKCPALRTYSLRRYDPVRGEIDVDFVMHGLGVASRWAAHAKP
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHHCHHHHHHCCCCC
GDLLGVGIPAGLTVAAADWYLLVGDHTALPAIARIMEQLPPTAKGRAFIEVPDASDQQPI
CCEEEECCCCCCEEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCE
ACRADIELTWLHLDGTSAGESTLLADAVLGMDWPSPENGFVWIGCESATVRKLRAHVRKE
EEEECEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
RGFGARQVLAIGYWRRGMSEPAYADAFHNDRDAEYFAMLKEQHHGEPHDHDHDHEEHDHG
CCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GPPG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]