| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749779
Identifier: 86749779
GI number: 86749779
Start: 3045565
End: 3046767
Strand: Reverse
Name: 86749779
Synonym: RPB_2662
Alternate gene names: NA
Gene position: 3046767-3045565 (Counterclockwise)
Preceding gene: 86749781
Following gene: 86749777
Centisome position: 57.14
GC content: 66.83
Gene sequence:
>1203_bases ATGACGATGATGGCCGTGCTCAGCGAAGGCCGTTCCGCGGAACACGCGTCGTCGTCGGTGCGTCCCGGTCGCATCGCACA TGTCGAGATTTTCCGCGACATGGCCTCGACGGAAGCGATCTGGCGCGCGCTGGAACAGCCCGAACAATTCTCCACGCCGT ATCAGAGGTTCGACTTGCTCGACGCGTGGCAGCGCCATGTCGGCCGCGCCGATCATGTCGAACCCTTCATCGTGGTGGCC AGCGACGCCGAGCAGCGGCCCTTGCTGCTGCTGCCGCTCGGCCTGGAGCGGCGCTTCGGCGTTCGGATCGCGCGCTTCCT CGGCGGCAAGCACACGACGTTCAACATGCCGCTGTGGCGCAGCGATGTCGCGCGGACCGCGGATGCGAACGACCTCGCCG CCCTTGTCGCAGGCCTGCGGGCGCGCCCGGACGGCGCCGACGTGCTGGCGCTGTCTCAGCAGCCGCTTCGCTGGCGCGAC CTCGCCAACCCGATGGCGCAGCTGCCGCATCAGCCCTCGATCAACGATTGTCCGGTGCTGCTGGTCGATCCTGCCGCGCC GCCGACCGACCGGATCAGCAACTCGTTCCGCCGCCGGCTCAAGACCAAGGAGAAGAAGCTCCAGACATTGCCCGGCTATC GCTACGTCCAGGCCAGGAGCGACGCCGACGTCGAACGCGTGCTCGATGCCTTCTTTCGGATCAAGCCGATCCGCATGGCG GCGCAGAAGCTGCCGAACGTGTTCGCCGACCCGGGCGTCGCGGATTTCATCCGCCAGGCCTGCATGACCGAGCTCCGGGG AGGCGGCCGGGCGATCGAGATCCACGCGCTCGAATCCGACGACGAGACGATCGCGATGTTCGCCGGCGTGGCCGACGGCC ATCGCTACTCGATGATGTTCAACACCTATACGCTGTCGGAGGCGTCGCGCTACAGTCCCGGCCTGATCCTGATGCGCTCG ATCATCGATCACTACGCCGCGCAGGGCTATCGCCGGCTCGATCTCGGCATCGGCTCCGACGACTACAAGAAACTGTTCTG CAAGGACCTCGACCCGATCTTCGACAGTTTCATCGCGCTGTCGCCGCGCGGCCGTCCGGCCGCCGCAGCGATGGCATCGA TCGCTCGCGCCAAACGCGTCGTCAAGCAGACCCCTGCCCTGATGCAGATCGCGCAACGGCTGCGCAGCGCGCTGCATCGC TGA
Upstream 100 bases:
>100_bases CCTCGCCGCGTTTCCCGCCACCTCATTACTGTTTGTTGAGATTTCTTTGTAAAGGTCCGGACACGCTGAAAACCGTAAAG ATTCATCTAAAGGAATTCAC
Downstream 100 bases:
>100_bases TCGCACCATCGCTTCGCGCCCGACGAAGGATGCCCGGGCAAGACCCGGGCATTTTCAATGCAGCGACATCGGAGCTGATT ACGCGGCGACGGTGCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Involved In Cellulose Biosynthesis-Like Protein
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MTMMAVLSEGRSAEHASSSVRPGRIAHVEIFRDMASTEAIWRALEQPEQFSTPYQRFDLLDAWQRHVGRADHVEPFIVVA SDAEQRPLLLLPLGLERRFGVRIARFLGGKHTTFNMPLWRSDVARTADANDLAALVAGLRARPDGADVLALSQQPLRWRD LANPMAQLPHQPSINDCPVLLVDPAAPPTDRISNSFRRRLKTKEKKLQTLPGYRYVQARSDADVERVLDAFFRIKPIRMA AQKLPNVFADPGVADFIRQACMTELRGGGRAIEIHALESDDETIAMFAGVADGHRYSMMFNTYTLSEASRYSPGLILMRS IIDHYAAQGYRRLDLGIGSDDYKKLFCKDLDPIFDSFIALSPRGRPAAAAMASIARAKRVVKQTPALMQIAQRLRSALHR
Sequences:
>Translated_400_residues MTMMAVLSEGRSAEHASSSVRPGRIAHVEIFRDMASTEAIWRALEQPEQFSTPYQRFDLLDAWQRHVGRADHVEPFIVVA SDAEQRPLLLLPLGLERRFGVRIARFLGGKHTTFNMPLWRSDVARTADANDLAALVAGLRARPDGADVLALSQQPLRWRD LANPMAQLPHQPSINDCPVLLVDPAAPPTDRISNSFRRRLKTKEKKLQTLPGYRYVQARSDADVERVLDAFFRIKPIRMA AQKLPNVFADPGVADFIRQACMTELRGGGRAIEIHALESDDETIAMFAGVADGHRYSMMFNTYTLSEASRYSPGLILMRS IIDHYAAQGYRRLDLGIGSDDYKKLFCKDLDPIFDSFIALSPRGRPAAAAMASIARAKRVVKQTPALMQIAQRLRSALHR >Mature_399_residues TMMAVLSEGRSAEHASSSVRPGRIAHVEIFRDMASTEAIWRALEQPEQFSTPYQRFDLLDAWQRHVGRADHVEPFIVVAS DAEQRPLLLLPLGLERRFGVRIARFLGGKHTTFNMPLWRSDVARTADANDLAALVAGLRARPDGADVLALSQQPLRWRDL ANPMAQLPHQPSINDCPVLLVDPAAPPTDRISNSFRRRLKTKEKKLQTLPGYRYVQARSDADVERVLDAFFRIKPIRMAA QKLPNVFADPGVADFIRQACMTELRGGGRAIEIHALESDDETIAMFAGVADGHRYSMMFNTYTLSEASRYSPGLILMRSI IDHYAAQGYRRLDLGIGSDDYKKLFCKDLDPIFDSFIALSPRGRPAAAAMASIARAKRVVKQTPALMQIAQRLRSALHR
Specific function: Unknown
COG id: COG5653
COG function: function code M; Protein involved in cellulose biosynthesis (CelD)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44785; Mature: 44654
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMMAVLSEGRSAEHASSSVRPGRIAHVEIFRDMASTEAIWRALEQPEQFSTPYQRFDLL CCHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHH DAWQRHVGRADHVEPFIVVASDAEQRPLLLLPLGLERRFGVRIARFLGGKHTTFNMPLWR HHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEECCCHHH SDVARTADANDLAALVAGLRARPDGADVLALSQQPLRWRDLANPMAQLPHQPSINDCPVL HHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCHHHHCCCCCCCCCCCEE LVDPAAPPTDRISNSFRRRLKTKEKKLQTLPGYRYVQARSDADVERVLDAFFRIKPIRMA EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH AQKLPNVFADPGVADFIRQACMTELRGGGRAIEIHALESDDETIAMFAGVADGHRYSMMF HHHCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEE NTYTLSEASRYSPGLILMRSIIDHYAAQGYRRLDLGIGSDDYKKLFCKDLDPIFDSFIAL EEEECCCHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCC SPRGRPAAAAMASIARAKRVVKQTPALMQIAQRLRSALHR CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC >Mature Secondary Structure TMMAVLSEGRSAEHASSSVRPGRIAHVEIFRDMASTEAIWRALEQPEQFSTPYQRFDLL CHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHH DAWQRHVGRADHVEPFIVVASDAEQRPLLLLPLGLERRFGVRIARFLGGKHTTFNMPLWR HHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEECCCHHH SDVARTADANDLAALVAGLRARPDGADVLALSQQPLRWRDLANPMAQLPHQPSINDCPVL HHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCHHHHCCCCCCCCCCCEE LVDPAAPPTDRISNSFRRRLKTKEKKLQTLPGYRYVQARSDADVERVLDAFFRIKPIRMA EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH AQKLPNVFADPGVADFIRQACMTELRGGGRAIEIHALESDDETIAMFAGVADGHRYSMMF HHHCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEE NTYTLSEASRYSPGLILMRSIIDHYAAQGYRRLDLGIGSDDYKKLFCKDLDPIFDSFIAL EEEECCCHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCC SPRGRPAAAAMASIARAKRVVKQTPALMQIAQRLRSALHR CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA