| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is gph [C]
Identifier: 86749760
GI number: 86749760
Start: 3023883
End: 3024566
Strand: Direct
Name: gph [C]
Synonym: RPB_2643
Alternate gene names: 86749760
Gene position: 3023883-3024566 (Clockwise)
Preceding gene: 86749759
Following gene: 86749761
Centisome position: 56.72
GC content: 62.87
Gene sequence:
>684_bases ATGAAAGCATTTTTCTTCGACCTCGATGGCACGCTGACCGACTCGCGGACGGGGCTGCACGATTCGTTTCGCGCGGCGAT CGAAGCGATCGGCGTGATGCCGCTTGGCGACGCCGAGCTTGACCTGTTCCTAGGCACGCCTCTGCCGGAGATGTTCCGAA CGTTGAAGGCCGACATCAGCCAGGCCGGAATCGAGGCCGGCATCGACGCTTTCCGGGCTTACTACGAAACCCACGGTATC CGTCAAAACCGTGCCTATCCCGGAGTTCGGGAGATGCTGGAGGCTTTGAAGACCAGACGGATTCCTGTCTGGGTCGTGAC CTCCAAGCCCCAGGCCTATGCCGAGCGTGTGATCCGCGATCTAGGCTTTGCCGATTTGGTCACCGACGTCGTCGGCGCGG GGCTCGCGGAGTTGGACACTAAAAGCGATCTGGTGAAGCGCGCGCTCGGCGAAGCGGGCGTCGCCCCTGGCGATGCCGTG ATGGTCGGAGACCGGCGCTATGATGTCGAAGGGGCCAAGGCCAATGGTGTCGTCGCTGTCGGCGTGACTTGGGGCTACGG CACGCGCGAAGAACTCGAGTCCGCGGGCTGCGATCGCCTCGTCGAGTCCGTTTCGGAGTTCTGTCAGATCTTCATCGATC GCTCGATCGTGCTTCGTACCAGGACCGCCGCCGCGGCCTGCTGA
Upstream 100 bases:
>100_bases CGTTCTGGCCGGAGCGGACAAAGATCCTGCGCCCGCGGCGCGGGGCTGGTTCACGCCAGAGGTCGTCTCGAAGTTCAACA AGCACGCCTAGGCTGATGCG
Downstream 100 bases:
>100_bases ACCGGTCGCCATGTCGGCGGAGCCCGCAGGCATCCTTGCGCACGCTCATGAGTGGCGCGCGCGGCTGCGAACTGAACCAA TCGGAACCCGGCGCGTTACC
Product: HAD family hydrolase
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKAFFFDLDGTLTDSRTGLHDSFRAAIEAIGVMPLGDAELDLFLGTPLPEMFRTLKADISQAGIEAGIDAFRAYYETHGI RQNRAYPGVREMLEALKTRRIPVWVVTSKPQAYAERVIRDLGFADLVTDVVGAGLAELDTKSDLVKRALGEAGVAPGDAV MVGDRRYDVEGAKANGVVAVGVTWGYGTREELESAGCDRLVESVSEFCQIFIDRSIVLRTRTAAAAC
Sequences:
>Translated_227_residues MKAFFFDLDGTLTDSRTGLHDSFRAAIEAIGVMPLGDAELDLFLGTPLPEMFRTLKADISQAGIEAGIDAFRAYYETHGI RQNRAYPGVREMLEALKTRRIPVWVVTSKPQAYAERVIRDLGFADLVTDVVGAGLAELDTKSDLVKRALGEAGVAPGDAV MVGDRRYDVEGAKANGVVAVGVTWGYGTREELESAGCDRLVESVSEFCQIFIDRSIVLRTRTAAAAC >Mature_227_residues MKAFFFDLDGTLTDSRTGLHDSFRAAIEAIGVMPLGDAELDLFLGTPLPEMFRTLKADISQAGIEAGIDAFRAYYETHGI RQNRAYPGVREMLEALKTRRIPVWVVTSKPQAYAERVIRDLGFADLVTDVVGAGLAELDTKSDLVKRALGEAGVAPGDAV MVGDRRYDVEGAKANGVVAVGVTWGYGTREELESAGCDRLVESVSEFCQIFIDRSIVLRTRTAAAAC
Specific function: Specifically dephosphorylates nucleoside 5'- monophosphates to nucleosides and inorganic phosphate. Displays high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=225, Percent_Identity=24.8888888888889, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 24609; Mature: 24609
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFFFDLDGTLTDSRTGLHDSFRAAIEAIGVMPLGDAELDLFLGTPLPEMFRTLKADIS CCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHH QAGIEAGIDAFRAYYETHGIRQNRAYPGVREMLEALKTRRIPVWVVTSKPQAYAERVIRD HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH LGFADLVTDVVGAGLAELDTKSDLVKRALGEAGVAPGDAVMVGDRRYDVEGAKANGVVAV CCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCEECCCCCCCCCEEEE GVTWGYGTREELESAGCDRLVESVSEFCQIFIDRSIVLRTRTAAAAC EEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEEECHHHHCC >Mature Secondary Structure MKAFFFDLDGTLTDSRTGLHDSFRAAIEAIGVMPLGDAELDLFLGTPLPEMFRTLKADIS CCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHH QAGIEAGIDAFRAYYETHGIRQNRAYPGVREMLEALKTRRIPVWVVTSKPQAYAERVIRD HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH LGFADLVTDVVGAGLAELDTKSDLVKRALGEAGVAPGDAVMVGDRRYDVEGAKANGVVAV CCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCEECCCCCCCCCEEEE GVTWGYGTREELESAGCDRLVESVSEFCQIFIDRSIVLRTRTAAAAC EEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]