| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749679
Identifier: 86749679
GI number: 86749679
Start: 2937958
End: 2939286
Strand: Reverse
Name: 86749679
Synonym: RPB_2561
Alternate gene names: NA
Gene position: 2939286-2937958 (Counterclockwise)
Preceding gene: 86749685
Following gene: 86749677
Centisome position: 55.13
GC content: 71.56
Gene sequence:
>1329_bases ATGACCAACGCCCTCGCCTCGCTGTCGCGCCGCAGCGTTCTCGCCGCCCTCGGGGGCACCGCCTTCGCCGGCCTGCCGTT GCCGGGATTCGCCCAATCGACAACGCCGCGCAAGACGCTGACGCTGCGCGCTGCGGCAGGAACGACCGTGCTGAAAGCCG GCGGCGCGCCGGTGGCGCGACCGATGCTGGCGCTCGCCGAAACCGTCGTGCTGCGGCGTGGCGACGAGGTGGCGGTGCGG TTCGAGAACGGGCTGACGCAGCCGGCGCTGCTGAGCTGGCGCGGGCTCGACGGCGTGGCGGCCGCCGAGCCGCTGGTCGC CCGCCGGCCGGTGCCGCCCGGCGGCAACGACAGCTTCGTGATCCCGTTGCGCGCCGCCGGCACCCTGCTCGTCGACCTCC GCCTCACCGCCGATGGCGGCCCGGCGCCGATGCCGGCGCTGCCGCTGGTGGTGCAGGAGGCCACCCCGCCGCAGGTCGAT GGCGACGAGGTCGTGCTGATCGAGGATGCGAGACTCGGCAGCGACGGCAAGCCGCTCGCGTCCGGACTCGACGCCGGCGA TATGCCGTGGCTGTACACCGTCAACGGCCAGCCGACCGCGGACATCACGCTGCGCGCCAATGGCCGGTTCAGGCTCCGCT TCATCAACGCCTGCCAGCGCAATGTGATCGCACTGAGAATCGACGATCACGACGTGCGGGTGATCGCCCTCGACAGCCAG CCGGCCGAGCCCTTTTTGGCGCGCAACGGCACGCTGGTGCTGGCGCCCGGCACCCGCGTCGATGTGCTGCTCGATGCCAC AAGGCCGCCGGGCGCGACGTCTGCGATCACGCTGCTCGACGGCGGCAAGCCGACGCCGATCGCACGACTCGTCACGTCGA GCGAGCCTCCGCTGCGGCCAGCACCGCTGCCACTGCCCGCGCCCCTGCCCGACAATGGTCTGCCGGCGCAGCTCCCGCTC AGCTCGGCGCTTCGCGTCGACCTGCCGCTCGGCGCGCTGACCTCGGCGCAGCTCGACTGGTTCGCGCCCGACACATTCGT TGCCGCCAAAGGCCCCGCCTTCCAGGCCAAGCGCGGCCGCACCGTCGTGCTGACCTTGAACAACCGCGCGACGATGCCGA TGATCTTTCATCTGCACGGCCATCATTTCCGGCTGCTCGACCGGCTCGACGACGGCTGGAAGCCGTTCTGGCTGGATACG CTGGCGATCGACGCCGGCCAGACCCAGCGCATCGCCTTCGCCGCCGAATATCCGGGCCTGTGGCTGATCGAAGCGTTCGC CGCGAAATGGTCCGCGCCGCGGCTGCTGCGGAGCTACGCCGTCAGTTGA
Upstream 100 bases:
>100_bases TGACATATAGGTTGTGCATCAAGAAAATCCCGCTGCACTGCAGCTTCCGCGGCGGCCCGCCGCAGTGGACAGCACGGCGC GAACATGGTCCGCATCGGCC
Downstream 100 bases:
>100_bases ACGTTCGGTTCCAAGGATTGAACATTACAGCAATTTCTAGAGCATTCGCTCCACATCAAGGCGTCATCCTGAGGTGCGAG CGCAGCGAGCCTCGAAGGAT
Product: multicopper oxidase
Products: NA
Alternate protein names: Multicopper Oxidase Domain Protein; Twin-Arginine Translocation Pathway Signal; Multicopper Oxidase Protein; Multicopper Oxidase Family; Multicopper Oxidase Domain-Containing Protein; Multicopper Oxidase-Like Protein; Laccase; Metallo-Oxidoreductase Protein
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTNALASLSRRSVLAALGGTAFAGLPLPGFAQSTTPRKTLTLRAAAGTTVLKAGGAPVARPMLALAETVVLRRGDEVAVR FENGLTQPALLSWRGLDGVAAAEPLVARRPVPPGGNDSFVIPLRAAGTLLVDLRLTADGGPAPMPALPLVVQEATPPQVD GDEVVLIEDARLGSDGKPLASGLDAGDMPWLYTVNGQPTADITLRANGRFRLRFINACQRNVIALRIDDHDVRVIALDSQ PAEPFLARNGTLVLAPGTRVDVLLDATRPPGATSAITLLDGGKPTPIARLVTSSEPPLRPAPLPLPAPLPDNGLPAQLPL SSALRVDLPLGALTSAQLDWFAPDTFVAAKGPAFQAKRGRTVVLTLNNRATMPMIFHLHGHHFRLLDRLDDGWKPFWLDT LAIDAGQTQRIAFAAEYPGLWLIEAFAAKWSAPRLLRSYAVS
Sequences:
>Translated_442_residues MTNALASLSRRSVLAALGGTAFAGLPLPGFAQSTTPRKTLTLRAAAGTTVLKAGGAPVARPMLALAETVVLRRGDEVAVR FENGLTQPALLSWRGLDGVAAAEPLVARRPVPPGGNDSFVIPLRAAGTLLVDLRLTADGGPAPMPALPLVVQEATPPQVD GDEVVLIEDARLGSDGKPLASGLDAGDMPWLYTVNGQPTADITLRANGRFRLRFINACQRNVIALRIDDHDVRVIALDSQ PAEPFLARNGTLVLAPGTRVDVLLDATRPPGATSAITLLDGGKPTPIARLVTSSEPPLRPAPLPLPAPLPDNGLPAQLPL SSALRVDLPLGALTSAQLDWFAPDTFVAAKGPAFQAKRGRTVVLTLNNRATMPMIFHLHGHHFRLLDRLDDGWKPFWLDT LAIDAGQTQRIAFAAEYPGLWLIEAFAAKWSAPRLLRSYAVS >Mature_441_residues TNALASLSRRSVLAALGGTAFAGLPLPGFAQSTTPRKTLTLRAAAGTTVLKAGGAPVARPMLALAETVVLRRGDEVAVRF ENGLTQPALLSWRGLDGVAAAEPLVARRPVPPGGNDSFVIPLRAAGTLLVDLRLTADGGPAPMPALPLVVQEATPPQVDG DEVVLIEDARLGSDGKPLASGLDAGDMPWLYTVNGQPTADITLRANGRFRLRFINACQRNVIALRIDDHDVRVIALDSQP AEPFLARNGTLVLAPGTRVDVLLDATRPPGATSAITLLDGGKPTPIARLVTSSEPPLRPAPLPLPAPLPDNGLPAQLPLS SALRVDLPLGALTSAQLDWFAPDTFVAAKGPAFQAKRGRTVVLTLNNRATMPMIFHLHGHHFRLLDRLDDGWKPFWLDTL AIDAGQTQRIAFAAEYPGLWLIEAFAAKWSAPRLLRSYAVS
Specific function: Unknown
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46800; Mature: 46668
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNALASLSRRSVLAALGGTAFAGLPLPGFAQSTTPRKTLTLRAAAGTTVLKAGGAPVAR CCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCHHH PMLALAETVVLRRGDEVAVRFENGLTQPALLSWRGLDGVAAAEPLVARRPVPPGGNDSFV HHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCHHCCCHHHCCCCCCCCCCCEE IPLRAAGTLLVDLRLTADGGPAPMPALPLVVQEATPPQVDGDEVVLIEDARLGSDGKPLA EEEECCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCHHH SGLDAGDMPWLYTVNGQPTADITLRANGRFRLRFINACQRNVIALRIDDHDVRVIALDSQ CCCCCCCCCEEEEECCCCCEEEEEEECCEEEEEEEECCCCCEEEEEECCCCEEEEEECCC PAEPFLARNGTLVLAPGTRVDVLLDATRPPGATSAITLLDGGKPTPIARLVTSSEPPLRP CCCCHHHCCCEEEEECCCEEEEEEECCCCCCCCEEEEEECCCCCCCHHEEEECCCCCCCC APLPLPAPLPDNGLPAQLPLSSALRVDLPLGALTSAQLDWFAPDTFVAAKGPAFQAKRGR CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCCCCC TVVLTLNNRATMPMIFHLHGHHFRLLDRLDDGWKPFWLDTLAIDAGQTQRIAFAAEYPGL EEEEEECCCCCCEEEEEECCCEEEEEHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCE WLIEAFAAKWSAPRLLRSYAVS EEEEHHHHCCCCHHHHHHHCCC >Mature Secondary Structure TNALASLSRRSVLAALGGTAFAGLPLPGFAQSTTPRKTLTLRAAAGTTVLKAGGAPVAR CCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCHHH PMLALAETVVLRRGDEVAVRFENGLTQPALLSWRGLDGVAAAEPLVARRPVPPGGNDSFV HHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCHHCCCHHHCCCCCCCCCCCEE IPLRAAGTLLVDLRLTADGGPAPMPALPLVVQEATPPQVDGDEVVLIEDARLGSDGKPLA EEEECCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCHHH SGLDAGDMPWLYTVNGQPTADITLRANGRFRLRFINACQRNVIALRIDDHDVRVIALDSQ CCCCCCCCCEEEEECCCCCEEEEEEECCEEEEEEEECCCCCEEEEEECCCCEEEEEECCC PAEPFLARNGTLVLAPGTRVDVLLDATRPPGATSAITLLDGGKPTPIARLVTSSEPPLRP CCCCHHHCCCEEEEECCCEEEEEEECCCCCCCCEEEEEECCCCCCCHHEEEECCCCCCCC APLPLPAPLPDNGLPAQLPLSSALRVDLPLGALTSAQLDWFAPDTFVAAKGPAFQAKRGR CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCCCCC TVVLTLNNRATMPMIFHLHGHHFRLLDRLDDGWKPFWLDTLAIDAGQTQRIAFAAEYPGL EEEEEECCCCCCEEEEEECCCEEEEEHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCE WLIEAFAAKWSAPRLLRSYAVS EEEEHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA