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The map label for this gene is 86749657

Identifier: 86749657

GI number: 86749657

Start: 2904510

End: 2906798

Strand: Reverse

Name: 86749657

Synonym: RPB_2538

Alternate gene names: NA

Gene position: 2906798-2904510 (Counterclockwise)

Preceding gene: 86749658

Following gene: 86749656

Centisome position: 54.52

GC content: 67.15

Gene sequence:

>2289_bases
ATGACGCTCCGTCCCAAGCTCGTCCTGCCTACGCCACAGCGTTCGGCGCGGCCGGTCCGCTGGGCGTTCGACGACGCCGC
TCGCCTCTGCCTCCTCGGCGAGCAGTTCAACTGCATCGAGACCAATGAGCGTGGATGCATCCTCGAATACACCACGAGGA
CGTCGCCCAACGGCCAGCCGCTGACGTTGCCGATCACATGGGACGAACTCGACGCCCTCGAACGGGATGGCGCGTTCACG
TTCGAGCGCAAGGGCTATTCCCTCGAACAGTCGCGCAAAATGCTGCGCGCAGGCGCCCGCCGGATGCGCGATCTGCCGAA
GAAACAGCGCGAAACCATCGCCTGGAAGCGGATGCTGATCGAGCGGTTCTGCCAACTGCAGGCGCAGGGCCTCGCCACGA
TGTCCGAGGCGTCGATCCGCAACGCGCTCGAAATCATCCAGAGCACGCTCTGCAGGGAGGCCGAAGAAACCAAGGCCAAG
AAGGGCGCCCAGGCCGGCAGCGAAATCATCACCCTCCGGCGGATGCCGCATCCCTCGACCCTCGTCCGCTGGCTCAAGAA
GATGCCCGACACCAGCAAGGAGTCCGCCATGACCCTGATGGACGGCCGCTGCAACAGCGGCAACTTCATCCCGCGGTTCA
ACGTCGACGAGACCGCCATCCTGTTCAGGTGCGCGCGAGCGTTCCTGATGAAGGAGAAGCCCAGCATCGCCTCCACCAAC
ACGATGATGCGGATCGAATTCAGGAAGGTGAACGCCGAGCGTCGCAGGAAGCATCTGCCGGACCTGAAAATTCCGAGCGA
GAAGAAGCTCCGCGACGTCATCGGTTCCTTCACCGCAATCGAGACCGCCGCAGGACGCGAGGGCCTCGACGAAGCCGTCA
ACCTCTTCCGCCCGTGCAGCGGCGGCGTGCAGGACCTCGTGCGCCCGCTGCAGCGCGTCGAGGTCGACGGCTGGAAAATC
CACCTCTACATGATCGCCGTCGCGATCGGCCTCTGGGACCACTTCCCCGAGGATCTCCGCAACGCCATGAAGCCGCTCCG
CATGTGGCTCACCGCCGCGCTCTGCTGCACGACGCGCTGCTACGTCGGCCTGTGGATCTCCAAGACGGTCGATGCCGCCA
GCACCCTGCAGGCGCTGCGGATGATCTTCACCGACAAAACCGCGCTCGCCTCCTCGTTCGGCGCCACAACGCCCTGGGAG
TATCGCGGAACGCCGGAGCTGATGGTGTTCGACACCGGATCCGAAAACTACAACGAGGATGTCGTCGCCGCCCTCACCGA
CCTGCGCATCCCCTTCCTGTTCCCCCAGACCAGCGCGCCCTCGGCGCGCGGACGCATCGAACGCTCCCACCGCACCCTCG
ACCAGAAGCTGATCTCGAACCTCTGCGGGCGCGCCATGCCGGTCCAGATGCGCAAACAGTACGAGGGCGAGGCGCGCGCG
TGCATCACCGTGGACGAAGCGGTCAAGGTGATCCTCCGCTACATCGTCGACGGCTACCACAACACGCCGCACGCCGGCCT
CGGAGGACAGACGCCGCGCTCGAAATGGCTCGACGTCTCCCTCGAGTTCGGAGTCCCGCGCTGCCCCGACATCCATGAAC
TCCGCCTCGCCCTCGGCGTGGAACGCGAGGCCCGCATGCAGGCCAGCGGCATCCTCGTCCTCGGCAACTGGTACAGGTCG
CCCGAGCAGCACGCGCTGTTCCAGAAGATCCGGAACGCGCCCGTCAGGACCCGATACGACCGCGAGAACCTCGGCTGGAT
CTCGCTCCAGCTCGACGACGTCTCGTGGGCCACCGTGCCCGGTCCGGCCTGGATGCGCGGCGTCAACGCCGACACCTGGA
TGGCCGCCCGCACCGACCTGCAGCGGCGGTTCAAGATCGAAGCGCAGATGACCGAACCCATCGTGCTCGACGCCATCGCG
GCCGCCCTCGAGGTCGACCGCGAGGCCCGAGGACGCAGAGGCATCATCGACTCGCCGCTCACGCAGGACATGCTCGACGC
CGTCCAGGCGCGGACCCTGGCCGGCATCGCGTGGACCGACGACAACGCCGTGCCGGCGCAGCGTCCCACCGGCCTGTTCG
CAGGCACCATCCCGGTCGGAACGGCCGCCACGGGCGCGCCCGACGAGCAGGATCGGCAGCGCGGCTCGACGCCGACGTCT
GGAGGACCCACCCAGCCCGCCTCCGCGAAACCCTCCTACAAGCCGCCGAAGCGCGCCGCGCGCGAGACGCCGCCGACGCC
CACAAAACCCAAGCCCGTCCGCTCGTGGACCAAACGCGACACGGAGTGA

Upstream 100 bases:

>100_bases
CGCGGACCGCCGCCTCGTCCTCGTCGAGCACACCGCTCTCGACCACGACGCCGTCGTCGAACGTCCCTCCTCCTCGATCA
ACCGGTAGGTGCGCATGGCC

Downstream 100 bases:

>100_bases
CCGGCATGATCACGCCCGACAACGCCGATCCCGCCGCGTATCTGCGCGCCCTCTGGTCCAAGGACCAGCGCCGCCGCGAG
GCGATCATCGAAGCGATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Transposase-Like Mu; Integrase Catalytic Domain; TniA Transposase; TniA-Like Transposition Protein; Integrase; Transposase-Related Protein; Transposase Related Protein; TniA Protein; Integrase/Transposase

Number of amino acids: Translated: 762; Mature: 761

Protein sequence:

>762_residues
MTLRPKLVLPTPQRSARPVRWAFDDAARLCLLGEQFNCIETNERGCILEYTTRTSPNGQPLTLPITWDELDALERDGAFT
FERKGYSLEQSRKMLRAGARRMRDLPKKQRETIAWKRMLIERFCQLQAQGLATMSEASIRNALEIIQSTLCREAEETKAK
KGAQAGSEIITLRRMPHPSTLVRWLKKMPDTSKESAMTLMDGRCNSGNFIPRFNVDETAILFRCARAFLMKEKPSIASTN
TMMRIEFRKVNAERRRKHLPDLKIPSEKKLRDVIGSFTAIETAAGREGLDEAVNLFRPCSGGVQDLVRPLQRVEVDGWKI
HLYMIAVAIGLWDHFPEDLRNAMKPLRMWLTAALCCTTRCYVGLWISKTVDAASTLQALRMIFTDKTALASSFGATTPWE
YRGTPELMVFDTGSENYNEDVVAALTDLRIPFLFPQTSAPSARGRIERSHRTLDQKLISNLCGRAMPVQMRKQYEGEARA
CITVDEAVKVILRYIVDGYHNTPHAGLGGQTPRSKWLDVSLEFGVPRCPDIHELRLALGVEREARMQASGILVLGNWYRS
PEQHALFQKIRNAPVRTRYDRENLGWISLQLDDVSWATVPGPAWMRGVNADTWMAARTDLQRRFKIEAQMTEPIVLDAIA
AALEVDREARGRRGIIDSPLTQDMLDAVQARTLAGIAWTDDNAVPAQRPTGLFAGTIPVGTAATGAPDEQDRQRGSTPTS
GGPTQPASAKPSYKPPKRAARETPPTPTKPKPVRSWTKRDTE

Sequences:

>Translated_762_residues
MTLRPKLVLPTPQRSARPVRWAFDDAARLCLLGEQFNCIETNERGCILEYTTRTSPNGQPLTLPITWDELDALERDGAFT
FERKGYSLEQSRKMLRAGARRMRDLPKKQRETIAWKRMLIERFCQLQAQGLATMSEASIRNALEIIQSTLCREAEETKAK
KGAQAGSEIITLRRMPHPSTLVRWLKKMPDTSKESAMTLMDGRCNSGNFIPRFNVDETAILFRCARAFLMKEKPSIASTN
TMMRIEFRKVNAERRRKHLPDLKIPSEKKLRDVIGSFTAIETAAGREGLDEAVNLFRPCSGGVQDLVRPLQRVEVDGWKI
HLYMIAVAIGLWDHFPEDLRNAMKPLRMWLTAALCCTTRCYVGLWISKTVDAASTLQALRMIFTDKTALASSFGATTPWE
YRGTPELMVFDTGSENYNEDVVAALTDLRIPFLFPQTSAPSARGRIERSHRTLDQKLISNLCGRAMPVQMRKQYEGEARA
CITVDEAVKVILRYIVDGYHNTPHAGLGGQTPRSKWLDVSLEFGVPRCPDIHELRLALGVEREARMQASGILVLGNWYRS
PEQHALFQKIRNAPVRTRYDRENLGWISLQLDDVSWATVPGPAWMRGVNADTWMAARTDLQRRFKIEAQMTEPIVLDAIA
AALEVDREARGRRGIIDSPLTQDMLDAVQARTLAGIAWTDDNAVPAQRPTGLFAGTIPVGTAATGAPDEQDRQRGSTPTS
GGPTQPASAKPSYKPPKRAARETPPTPTKPKPVRSWTKRDTE
>Mature_761_residues
TLRPKLVLPTPQRSARPVRWAFDDAARLCLLGEQFNCIETNERGCILEYTTRTSPNGQPLTLPITWDELDALERDGAFTF
ERKGYSLEQSRKMLRAGARRMRDLPKKQRETIAWKRMLIERFCQLQAQGLATMSEASIRNALEIIQSTLCREAEETKAKK
GAQAGSEIITLRRMPHPSTLVRWLKKMPDTSKESAMTLMDGRCNSGNFIPRFNVDETAILFRCARAFLMKEKPSIASTNT
MMRIEFRKVNAERRRKHLPDLKIPSEKKLRDVIGSFTAIETAAGREGLDEAVNLFRPCSGGVQDLVRPLQRVEVDGWKIH
LYMIAVAIGLWDHFPEDLRNAMKPLRMWLTAALCCTTRCYVGLWISKTVDAASTLQALRMIFTDKTALASSFGATTPWEY
RGTPELMVFDTGSENYNEDVVAALTDLRIPFLFPQTSAPSARGRIERSHRTLDQKLISNLCGRAMPVQMRKQYEGEARAC
ITVDEAVKVILRYIVDGYHNTPHAGLGGQTPRSKWLDVSLEFGVPRCPDIHELRLALGVEREARMQASGILVLGNWYRSP
EQHALFQKIRNAPVRTRYDRENLGWISLQLDDVSWATVPGPAWMRGVNADTWMAARTDLQRRFKIEAQMTEPIVLDAIAA
ALEVDREARGRRGIIDSPLTQDMLDAVQARTLAGIAWTDDNAVPAQRPTGLFAGTIPVGTAATGAPDEQDRQRGSTPTSG
GPTQPASAKPSYKPPKRAARETPPTPTKPKPVRSWTKRDTE

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85623; Mature: 85492

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRPKLVLPTPQRSARPVRWAFDDAARLCLLGEQFNCIETNERGCILEYTTRTSPNGQP
CCCCCCEECCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCCCE
LTLPITWDELDALERDGAFTFERKGYSLEQSRKMLRAGARRMRDLPKKQRETIAWKRMLI
EEEEEEHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ERFCQLQAQGLATMSEASIRNALEIIQSTLCREAEETKAKKGAQAGSEIITLRRMPHPST
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH
LVRWLKKMPDTSKESAMTLMDGRCNSGNFIPRFNVDETAILFRCARAFLMKEKPSIASTN
HHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
TMMRIEFRKVNAERRRKHLPDLKIPSEKKLRDVIGSFTAIETAAGREGLDEAVNLFRPCS
CEEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
GGVQDLVRPLQRVEVDGWKIHLYMIAVAIGLWDHFPEDLRNAMKPLRMWLTAALCCTTRC
CCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVGLWISKTVDAASTLQALRMIFTDKTALASSFGATTPWEYRGTPELMVFDTGSENYNED
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHH
VVAALTDLRIPFLFPQTSAPSARGRIERSHRTLDQKLISNLCGRAMPVQMRKQYEGEARA
HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCE
CITVDEAVKVILRYIVDGYHNTPHAGLGGQTPRSKWLDVSLEFGVPRCPDIHELRLALGV
EEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCC
EREARMQASGILVLGNWYRSPEQHALFQKIRNAPVRTRYDRENLGWISLQLDDVSWATVP
CHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEECC
GPAWMRGVNADTWMAARTDLQRRFKIEAQMTEPIVLDAIAAALEVDREARGRRGIIDSPL
CHHHHCCCCCCHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH
TQDMLDAVQARTLAGIAWTDDNAVPAQRPTGLFAGTIPVGTAATGAPDEQDRQRGSTPTS
HHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCC
GGPTQPASAKPSYKPPKRAARETPPTPTKPKPVRSWTKRDTE
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
TLRPKLVLPTPQRSARPVRWAFDDAARLCLLGEQFNCIETNERGCILEYTTRTSPNGQP
CCCCCEECCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCCCE
LTLPITWDELDALERDGAFTFERKGYSLEQSRKMLRAGARRMRDLPKKQRETIAWKRMLI
EEEEEEHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ERFCQLQAQGLATMSEASIRNALEIIQSTLCREAEETKAKKGAQAGSEIITLRRMPHPST
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH
LVRWLKKMPDTSKESAMTLMDGRCNSGNFIPRFNVDETAILFRCARAFLMKEKPSIASTN
HHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
TMMRIEFRKVNAERRRKHLPDLKIPSEKKLRDVIGSFTAIETAAGREGLDEAVNLFRPCS
CEEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
GGVQDLVRPLQRVEVDGWKIHLYMIAVAIGLWDHFPEDLRNAMKPLRMWLTAALCCTTRC
CCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVGLWISKTVDAASTLQALRMIFTDKTALASSFGATTPWEYRGTPELMVFDTGSENYNED
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHH
VVAALTDLRIPFLFPQTSAPSARGRIERSHRTLDQKLISNLCGRAMPVQMRKQYEGEARA
HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCE
CITVDEAVKVILRYIVDGYHNTPHAGLGGQTPRSKWLDVSLEFGVPRCPDIHELRLALGV
EEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCC
EREARMQASGILVLGNWYRSPEQHALFQKIRNAPVRTRYDRENLGWISLQLDDVSWATVP
CHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEECC
GPAWMRGVNADTWMAARTDLQRRFKIEAQMTEPIVLDAIAAALEVDREARGRRGIIDSPL
CHHHHCCCCCCHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH
TQDMLDAVQARTLAGIAWTDDNAVPAQRPTGLFAGTIPVGTAATGAPDEQDRQRGSTPTS
HHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCC
GGPTQPASAKPSYKPPKRAARETPPTPTKPKPVRSWTKRDTE
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA