| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749472
Identifier: 86749472
GI number: 86749472
Start: 2702547
End: 2703407
Strand: Direct
Name: 86749472
Synonym: RPB_2352
Alternate gene names: NA
Gene position: 2702547-2703407 (Clockwise)
Preceding gene: 86749471
Following gene: 86749473
Centisome position: 50.69
GC content: 66.9
Gene sequence:
>861_bases ATGTCGGCCCGTTACGACGAACTCATGGCCCTCGAGGCGATCGGCCAGAACTACGCCTACACCGATCGCGACGTGATGCT CTATGCCTACGGCATCGGCATGGGCGCCGATCCGATGGATGAGCGCGAACTCGCCTTCGTCAACGAGGCGACCTACACCG AGCGGCCGCTGAAAGTGGTGCCGACCTTCGCCTCGGTCGCGGCATGGGGCGCGGGCCCCGGCGAGATGAATCTCAATCGC CTGCTGGTCGTCGACGGCGAGCGCGACATCACCTTTCATCGGCCGATGCCGGTGGCTGCGAAGATCACCGCCGATTCAAC CGTCGTGCAGGTCTACGACAAGGGCAAGGACAAGGGCGTGGTGATCCGTCACCAGACCATCCTGCGCGACGAGGCCGGCG CCGAGCTGGCGACGCTGCTGGCGTCGCGCTTCGCCCGCGGCGACGGCGGCTTCGGCGGCCCGGCGCTGGAGCAGCCCGAG CCGCACAAGATGCCGAGCCGCGCGCCGGATCGCTCGGTCGATATCACCACCCGGCCGGATCAGGCGCTGATCTATCGGCT GTGCGGCGACCGCAACCCGCTGCACTCCGATCCGGAATTCGCCCAGAAAGCCGGGTTCCCGCGGCCGATCCTGCACGGCA TGTGCACTTACGGCATCACCTGCCGCGGCGTGCTGCAGACCTATGCGGATTACGACGCCTCGGCGTTCCGGCAGCACGCC GTGCGGTTCTCGTCGCCGGTCTATCCGGGCGAGACCGTCACGATGGATTTGTGGAAGGACGGCAATGTGATCTCGTTCGA GGCCAAGGTGAAGGCGCGCGACGTCACCGTGATCAAAAGCGGCCGGAGCGTGCTGGGCTAG
Upstream 100 bases:
>100_bases TCACCGGACTGCAATCGGCGCGACGTCAGTGCAGCCCTCTCTCACAAGGGGAGAGGGCGCAGTCGCAGGCGCAACACGAA TAACAACAATGGAGAAGCCG
Downstream 100 bases:
>100_bases GGCAGCTCGCGCCACAGAATCCGGTTCCAACCTCGATGCACTGTCCCGGTTCCCGGATTGTCGGCGGGACACGGCCATGC GAGGGCGGGGGGGATTTTGG
Product: MaoC-like dehydratase
Products: NA
Alternate protein names: 3-Alpha 7-Alpha; MaoC-Like Dehydratase; Dehydrogenase; Acyl Dehydratase; UfaA2 Protein; MaoC-Like Domain-Containing; Enoyl-CoA Hydratase; Short-Chain Dehydrogenase/Reductase SDR; MaoC Family Protein; Hydratase; MaoC Domain Protein Dehydratase; -Specific Enoyl-CoA Hydratase; 2-Enoyl Acyl-CoA Hydratase; MaoC Acyl Dehydratase; MaoC Domain-Containing Protein Dehydratase; MaoC Family Dehydratase; Multifunctional; Enoyl-CoA Hydratase/3-Hydroxyacyl-CoA Dehydratase; MaoC Like Dehydratase/Enoyl-CoA Hydratase; MaoC-Like-Specific Enoyl-CoA Hydratase; MaoC-Like Domain-Containing Protein; MaoC Family Dehydrogenase/Dehydratase; MaoC Like Domain Protein
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSARYDELMALEAIGQNYAYTDRDVMLYAYGIGMGADPMDERELAFVNEATYTERPLKVVPTFASVAAWGAGPGEMNLNR LLVVDGERDITFHRPMPVAAKITADSTVVQVYDKGKDKGVVIRHQTILRDEAGAELATLLASRFARGDGGFGGPALEQPE PHKMPSRAPDRSVDITTRPDQALIYRLCGDRNPLHSDPEFAQKAGFPRPILHGMCTYGITCRGVLQTYADYDASAFRQHA VRFSSPVYPGETVTMDLWKDGNVISFEAKVKARDVTVIKSGRSVLG
Sequences:
>Translated_286_residues MSARYDELMALEAIGQNYAYTDRDVMLYAYGIGMGADPMDERELAFVNEATYTERPLKVVPTFASVAAWGAGPGEMNLNR LLVVDGERDITFHRPMPVAAKITADSTVVQVYDKGKDKGVVIRHQTILRDEAGAELATLLASRFARGDGGFGGPALEQPE PHKMPSRAPDRSVDITTRPDQALIYRLCGDRNPLHSDPEFAQKAGFPRPILHGMCTYGITCRGVLQTYADYDASAFRQHA VRFSSPVYPGETVTMDLWKDGNVISFEAKVKARDVTVIKSGRSVLG >Mature_285_residues SARYDELMALEAIGQNYAYTDRDVMLYAYGIGMGADPMDERELAFVNEATYTERPLKVVPTFASVAAWGAGPGEMNLNRL LVVDGERDITFHRPMPVAAKITADSTVVQVYDKGKDKGVVIRHQTILRDEAGAELATLLASRFARGDGGFGGPALEQPEP HKMPSRAPDRSVDITTRPDQALIYRLCGDRNPLHSDPEFAQKAGFPRPILHGMCTYGITCRGVLQTYADYDASAFRQHAV RFSSPVYPGETVTMDLWKDGNVISFEAKVKARDVTVIKSGRSVLG
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504505, Length=285, Percent_Identity=37.8947368421053, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17532783, Length=275, Percent_Identity=37.4545454545455, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6322861, Length=280, Percent_Identity=31.4285714285714, Blast_Score=128, Evalue=1e-30, Organism=Drosophila melanogaster, GI18859837, Length=293, Percent_Identity=32.7645051194539, Blast_Score=156, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31419; Mature: 31288
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARYDELMALEAIGQNYAYTDRDVMLYAYGIGMGADPMDERELAFVNEATYTERPLKVV CCCCHHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEE PTFASVAAWGAGPGEMNLNRLLVVDGERDITFHRPMPVAAKITADSTVVQVYDKGKDKGV CCHHHHHHCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCEEEEEEECCCCCCE VIRHQTILRDEAGAELATLLASRFARGDGGFGGPALEQPEPHKMPSRAPDRSVDITTRPD EEEEHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC QALIYRLCGDRNPLHSDPEFAQKAGFPRPILHGMCTYGITCRGVLQTYADYDASAFRQHA HHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH VRFSSPVYPGETVTMDLWKDGNVISFEAKVKARDVTVIKSGRSVLG HHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECEEEEEECCCHHCC >Mature Secondary Structure SARYDELMALEAIGQNYAYTDRDVMLYAYGIGMGADPMDERELAFVNEATYTERPLKVV CCCHHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEE PTFASVAAWGAGPGEMNLNRLLVVDGERDITFHRPMPVAAKITADSTVVQVYDKGKDKGV CCHHHHHHCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCEEEEEEECCCCCCE VIRHQTILRDEAGAELATLLASRFARGDGGFGGPALEQPEPHKMPSRAPDRSVDITTRPD EEEEHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC QALIYRLCGDRNPLHSDPEFAQKAGFPRPILHGMCTYGITCRGVLQTYADYDASAFRQHA HHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH VRFSSPVYPGETVTMDLWKDGNVISFEAKVKARDVTVIKSGRSVLG HHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECEEEEEECCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA