| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749381
Identifier: 86749381
GI number: 86749381
Start: 2609357
End: 2610415
Strand: Direct
Name: 86749381
Synonym: RPB_2261
Alternate gene names: NA
Gene position: 2609357-2610415 (Clockwise)
Preceding gene: 86749380
Following gene: 86749383
Centisome position: 48.94
GC content: 65.53
Gene sequence:
>1059_bases TTGGTCGGGATACGGAAAGACGACGAGTACACCGGCACAAAGCCGGTCGAGGAGCGGCATCGCGTCGACGAAGCCCGCCT CGCGGAATGGATGCAGCAGAACGTCGAGGGCTATGCCGGCCCGCTCGAGGTTCAGCAGTTCAAGGGTGGCCAGTCCAACC CGACCTATCGGCTCAACACGCCCGGCCGCTCCTACGTGATGCGGCGCAAGCCGTTCGGCAAGCTGCTGCCGTCGGCGCAC GCGGTCGATCGCGAATTCCGCGTCATTGCGGCGCTCGGCAAGCAGGGCTTCCCGGTCGCTAAGGCTTACGCGCTGTGCAC CGACGATGCGGTGATCGGGGCGGCGTTCTACATCATGTCGATGGAAGAGGGCCGGGTGTTCTGGGATCCGACGCTGCCGA GCCAGACTCCGGAGGCGCGCCGCGCGATCTTCACCGCCAAGATCGAAACCCTTGCGAAGCTGCACTCTTACGATCCCGAG GCGATCGGCCTCAGCGATTTCGGCAAGCCGGGCAATTATTTCGCGCGCCAGGTCGATCGCTGGACCAAGCAGTACAAGGC CTCCGAGACGCAATCGATCCCGGAGATGGACCGGCTGATGGAATGGCTGCCGAGCACGGTGCCGGATCAGCAGCGGGTCT CGGTGGTCCACGGCGACTACCGGCTGGACAACATGATCTTCCACGCCACCGAGCCGCGGGTGCAGGCGGTGCTCGACTGG GAACTGTCGACGCTCGGCGATCCGATGGCTGATTTCACCTATCTGCTGATGCAGTGGGCGATGCCGGGCCTCGACGGCGC AGATCTGAAGGCGCTGAACATCCCGACCATCGAGGAGGCGACCGCGATCTACAACCGCGCCGCCGGCATCCCCGAAGTCG AGGACATGAACTGGTACTTCGCCTACAATACCTTCCGCCTCGCCGGCATCACCCAGGGTATCGCCGGCCGCATTCGCGAC GGCACCGCCGCCTCGGACAAGGCCAAGGACTCCGCCGCCCGCACCGTGCCGCTCGCCAAGGCGAGCTGGGCCTACGCGCA GAAGGCCGGCGCGAAGTAA
Upstream 100 bases:
>100_bases TTGAAAAGATGGATACCCGGGTCAAGCCCGGGTATGACTGTTTCTGGATTGTCGGAACGCGCGGCGCGTAACGCGCGAAC AAGAACAAGGGAGCGTCACG
Downstream 100 bases:
>100_bases GCATTTCACATAGAGGCGAGACCAGGGCGCGGCCAGTGAGGGCCGCGCCTTTTTGATGTGAAGCCATCGCGGTCCGCATC TGCCGTCATCGTCCGGCTTG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MVGIRKDDEYTGTKPVEERHRVDEARLAEWMQQNVEGYAGPLEVQQFKGGQSNPTYRLNTPGRSYVMRRKPFGKLLPSAH AVDREFRVIAALGKQGFPVAKAYALCTDDAVIGAAFYIMSMEEGRVFWDPTLPSQTPEARRAIFTAKIETLAKLHSYDPE AIGLSDFGKPGNYFARQVDRWTKQYKASETQSIPEMDRLMEWLPSTVPDQQRVSVVHGDYRLDNMIFHATEPRVQAVLDW ELSTLGDPMADFTYLLMQWAMPGLDGADLKALNIPTIEEATAIYNRAAGIPEVEDMNWYFAYNTFRLAGITQGIAGRIRD GTAASDKAKDSAARTVPLAKASWAYAQKAGAK
Sequences:
>Translated_352_residues MVGIRKDDEYTGTKPVEERHRVDEARLAEWMQQNVEGYAGPLEVQQFKGGQSNPTYRLNTPGRSYVMRRKPFGKLLPSAH AVDREFRVIAALGKQGFPVAKAYALCTDDAVIGAAFYIMSMEEGRVFWDPTLPSQTPEARRAIFTAKIETLAKLHSYDPE AIGLSDFGKPGNYFARQVDRWTKQYKASETQSIPEMDRLMEWLPSTVPDQQRVSVVHGDYRLDNMIFHATEPRVQAVLDW ELSTLGDPMADFTYLLMQWAMPGLDGADLKALNIPTIEEATAIYNRAAGIPEVEDMNWYFAYNTFRLAGITQGIAGRIRD GTAASDKAKDSAARTVPLAKASWAYAQKAGAK >Mature_352_residues MVGIRKDDEYTGTKPVEERHRVDEARLAEWMQQNVEGYAGPLEVQQFKGGQSNPTYRLNTPGRSYVMRRKPFGKLLPSAH AVDREFRVIAALGKQGFPVAKAYALCTDDAVIGAAFYIMSMEEGRVFWDPTLPSQTPEARRAIFTAKIETLAKLHSYDPE AIGLSDFGKPGNYFARQVDRWTKQYKASETQSIPEMDRLMEWLPSTVPDQQRVSVVHGDYRLDNMIFHATEPRVQAVLDW ELSTLGDPMADFTYLLMQWAMPGLDGADLKALNIPTIEEATAIYNRAAGIPEVEDMNWYFAYNTFRLAGITQGIAGRIRD GTAASDKAKDSAARTVPLAKASWAYAQKAGAK
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=350, Percent_Identity=45.7142857142857, Blast_Score=323, Evalue=1e-88, Organism=Homo sapiens, GI48976061, Length=350, Percent_Identity=45.7142857142857, Blast_Score=323, Evalue=1e-88, Organism=Homo sapiens, GI38505218, Length=341, Percent_Identity=39.8826979472141, Blast_Score=267, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17562446, Length=322, Percent_Identity=38.8198757763975, Blast_Score=235, Evalue=3e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39384; Mature: 39384
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGIRKDDEYTGTKPVEERHRVDEARLAEWMQQNVEGYAGPLEVQQFKGGQSNPTYRLNT CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEECC PGRSYVMRRKPFGKLLPSAHAVDREFRVIAALGKQGFPVAKAYALCTDDAVIGAAFYIMS CCHHHEECCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHEEEE MEEGRVFWDPTLPSQTPEARRAIFTAKIETLAKLHSYDPEAIGLSDFGKPGNYFARQVDR ECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHH WTKQYKASETQSIPEMDRLMEWLPSTVPDQQRVSVVHGDYRLDNMIFHATEPRVQAVLDW HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHEEEEECCEEECCEEEECCCCCEEEEEEC ELSTLGDPMADFTYLLMQWAMPGLDGADLKALNIPTIEEATAIYNRAAGIPEVEDMNWYF CHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEE AYNTFRLAGITQGIAGRIRDGTAASDKAKDSAARTVPLAKASWAYAQKAGAK EECCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MVGIRKDDEYTGTKPVEERHRVDEARLAEWMQQNVEGYAGPLEVQQFKGGQSNPTYRLNT CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEECC PGRSYVMRRKPFGKLLPSAHAVDREFRVIAALGKQGFPVAKAYALCTDDAVIGAAFYIMS CCHHHEECCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHEEEE MEEGRVFWDPTLPSQTPEARRAIFTAKIETLAKLHSYDPEAIGLSDFGKPGNYFARQVDR ECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHH WTKQYKASETQSIPEMDRLMEWLPSTVPDQQRVSVVHGDYRLDNMIFHATEPRVQAVLDW HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHEEEEECCEEECCEEEECCCCCEEEEEEC ELSTLGDPMADFTYLLMQWAMPGLDGADLKALNIPTIEEATAIYNRAAGIPEVEDMNWYF CHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEE AYNTFRLAGITQGIAGRIRDGTAASDKAKDSAARTVPLAKASWAYAQKAGAK EECCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA