Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749343

Identifier: 86749343

GI number: 86749343

Start: 2536606

End: 2537349

Strand: Direct

Name: 86749343

Synonym: RPB_2223

Alternate gene names: NA

Gene position: 2536606-2537349 (Clockwise)

Preceding gene: 86749342

Following gene: 86749344

Centisome position: 47.58

GC content: 67.74

Gene sequence:

>744_bases
GTGAGCAAGCTCGGTGACGATTGGAAGAGTGGTCAGGCGGCTGACGAGGATGACGTCGTCGGCCGATCGGGCAGGCGGTC
AGCGCTTCGTTACGGGGCGGCGCTGGCGATTCTCACGGTGCTTTTCGTCGGCGGCTACCGCTTTCTGTTTGATGGCGACG
ACCTGCCGCCGCCGCGTCAGGTCCACGAGATCACCATCGTCAACCTGCCGCCGCCGCCACCGCCGCCTCCGGCCCCTCCG
CCGCCCGAGCAGAAGATGATCGAGCAGCCGAAGATGGCGGAGCAGGAGTTCAAAGAGGAGCAGCCGATCGAGAAACCGCA
GGACGAGCCGGTCAAGGAAGCCAAGAACAGTGAGCCACCCGGACCGCTGTCGCTCGACGCCAAGCCGACCGGCCCCGGCG
ACCTGTTCAACCTTGGCGGCAAGCCCGGCGGCAACCCTTATGGCGGTGGGGGCGGCGGAGGCAGCCGCTGGGGCTGGTAC
GCTTCGATCGTGCAGTCGCAGATCGAAAGCGCGCTGCGCGGGAACCAGCGGACGCAGCGGGCGGTACTCCAGGTGCAGAT
CCGCTTGTGGGCGGACAGCACCGGCAAGATCAGTCGCGTGCAACTGGTGTCGTCGACCGGCGACGCCGAACTCGACCGCA
TCATCCGCGACGACGTGCTCGGCAGCCTGACGTTGCGCGAGCCTCCGCCCAAAGACATGCCGATGCCGATGGTGACGCGC
GTGACCGCGCGTCGGCCGAGCTGA

Upstream 100 bases:

>100_bases
GCCTGACACTGGAGACGACCGATTTCGCCATGCTGGTGAAGTTCGTCTCGCAATATCGCGTCGAGCGTAGTGCCGCTCGC
GGACCCTGCGGGAGCGCGTC

Downstream 100 bases:

>100_bases
CACAACTGACAACGACGACGAGTAGAAGGACAGGGGACGATGTTTGACTTCAATCCGAACGCACGCCGGCGCGCATATCT
GCTCGCCGTTTCGCTGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSKLGDDWKSGQAADEDDVVGRSGRRSALRYGAALAILTVLFVGGYRFLFDGDDLPPPRQVHEITIVNLPPPPPPPPAPP
PPEQKMIEQPKMAEQEFKEEQPIEKPQDEPVKEAKNSEPPGPLSLDAKPTGPGDLFNLGGKPGGNPYGGGGGGGSRWGWY
ASIVQSQIESALRGNQRTQRAVLQVQIRLWADSTGKISRVQLVSSTGDAELDRIIRDDVLGSLTLREPPPKDMPMPMVTR
VTARRPS

Sequences:

>Translated_247_residues
MSKLGDDWKSGQAADEDDVVGRSGRRSALRYGAALAILTVLFVGGYRFLFDGDDLPPPRQVHEITIVNLPPPPPPPPAPP
PPEQKMIEQPKMAEQEFKEEQPIEKPQDEPVKEAKNSEPPGPLSLDAKPTGPGDLFNLGGKPGGNPYGGGGGGGSRWGWY
ASIVQSQIESALRGNQRTQRAVLQVQIRLWADSTGKISRVQLVSSTGDAELDRIIRDDVLGSLTLREPPPKDMPMPMVTR
VTARRPS
>Mature_246_residues
SKLGDDWKSGQAADEDDVVGRSGRRSALRYGAALAILTVLFVGGYRFLFDGDDLPPPRQVHEITIVNLPPPPPPPPAPPP
PEQKMIEQPKMAEQEFKEEQPIEKPQDEPVKEAKNSEPPGPLSLDAKPTGPGDLFNLGGKPGGNPYGGGGGGGSRWGWYA
SIVQSQIESALRGNQRTQRAVLQVQIRLWADSTGKISRVQLVSSTGDAELDRIIRDDVLGSLTLREPPPKDMPMPMVTRV
TARRPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26767; Mature: 26635

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLGDDWKSGQAADEDDVVGRSGRRSALRYGAALAILTVLFVGGYRFLFDGDDLPPPRQ
CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCC
VHEITIVNLPPPPPPPPAPPPPEQKMIEQPKMAEQEFKEEQPIEKPQDEPVKEAKNSEPP
EEEEEEEECCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC
GPLSLDAKPTGPGDLFNLGGKPGGNPYGGGGGGGSRWGWYASIVQSQIESALRGNQRTQR
CCEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
AVLQVQIRLWADSTGKISRVQLVSSTGDAELDRIIRDDVLGSLTLREPPPKDMPMPMVTR
HHHHEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHH
VTARRPS
HHCCCCC
>Mature Secondary Structure 
SKLGDDWKSGQAADEDDVVGRSGRRSALRYGAALAILTVLFVGGYRFLFDGDDLPPPRQ
CCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCC
VHEITIVNLPPPPPPPPAPPPPEQKMIEQPKMAEQEFKEEQPIEKPQDEPVKEAKNSEPP
EEEEEEEECCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC
GPLSLDAKPTGPGDLFNLGGKPGGNPYGGGGGGGSRWGWYASIVQSQIESALRGNQRTQR
CCEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
AVLQVQIRLWADSTGKISRVQLVSSTGDAELDRIIRDDVLGSLTLREPPPKDMPMPMVTR
HHHHEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHH
VTARRPS
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA