| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749321
Identifier: 86749321
GI number: 86749321
Start: 2493889
End: 2494377
Strand: Direct
Name: 86749321
Synonym: RPB_2201
Alternate gene names: NA
Gene position: 2493889-2494377 (Clockwise)
Preceding gene: 86749320
Following gene: 86749322
Centisome position: 46.78
GC content: 72.19
Gene sequence:
>489_bases ATGAAACGCCCCACGCTGCGCGTTGCGCAGGCGATGCTGCTTCTGTCCCTGACCGCGGCGCCGGCGCTCGCCGACAGCGG CGGCTTCGCCATCGTCGTTCCGGGCCGCCCCGGCGTGCCGATCATCATCAACGGCCGCGACGTGTCCTATTCGGTGGTTG AAGGCGATTGGGGGCTGGAGCGCGGCGTGCACCGGCAGCCGACCTTCTACGGCAGCCGCCCGGTCCGCCTGCCCGAGGTC GGGCACTATTATCCCGGCTCGAACCGCTTGCCCGGCTATGGCCGGCTCGAGGTCGAGCCGCCGGCGAACCGGCCGCTGCC GAAGCCGGCCGAGAGTTTCCGTCAGTCCTGGGAAGTGGAATCGCGTCCGCCGCAGCCCGCCGCGGCGCCGCTGCCGATGG ATCCGCCGCAGGTGATCATCGCGCCGCCGCTGGACGAACGCGGAGGACGGCCGCCCTACGAGCCGAATTTCCGCGGGCCG CGCGGCTAG
Upstream 100 bases:
>100_bases ATGGAACTCGGATTCTGCGACGTGCGTTAGGCTTATCGGAAGTCCGCCACCGCGCCTTAACCCATCCGCCAGGCTTTTCG ACTACCCTCGGGTCATGTCC
Downstream 100 bases:
>100_bases ATCGCGCGCTGCGGACTGCGTCATTTCAACGTGACCTAACCAAGAAAAGACACCCAACAGGAGAGACACATGCGTCAGAT GATCTCGGGACTGGTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKRPTLRVAQAMLLLSLTAAPALADSGGFAIVVPGRPGVPIIINGRDVSYSVVEGDWGLERGVHRQPTFYGSRPVRLPEV GHYYPGSNRLPGYGRLEVEPPANRPLPKPAESFRQSWEVESRPPQPAAAPLPMDPPQVIIAPPLDERGGRPPYEPNFRGP RG
Sequences:
>Translated_162_residues MKRPTLRVAQAMLLLSLTAAPALADSGGFAIVVPGRPGVPIIINGRDVSYSVVEGDWGLERGVHRQPTFYGSRPVRLPEV GHYYPGSNRLPGYGRLEVEPPANRPLPKPAESFRQSWEVESRPPQPAAAPLPMDPPQVIIAPPLDERGGRPPYEPNFRGP RG >Mature_162_residues MKRPTLRVAQAMLLLSLTAAPALADSGGFAIVVPGRPGVPIIINGRDVSYSVVEGDWGLERGVHRQPTFYGSRPVRLPEV GHYYPGSNRLPGYGRLEVEPPANRPLPKPAESFRQSWEVESRPPQPAAAPLPMDPPQVIIAPPLDERGGRPPYEPNFRGP RG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17640; Mature: 17640
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRPTLRVAQAMLLLSLTAAPALADSGGFAIVVPGRPGVPIIINGRDVSYSVVEGDWGLE CCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCEEEECCCCCEEEEEECCCCCC RGVHRQPTFYGSRPVRLPEVGHYYPGSNRLPGYGRLEVEPPANRPLPKPAESFRQSWEVE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCC SRPPQPAAAPLPMDPPQVIIAPPLDERGGRPPYEPNFRGPRG CCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRPTLRVAQAMLLLSLTAAPALADSGGFAIVVPGRPGVPIIINGRDVSYSVVEGDWGLE CCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCEEEECCCCCEEEEEECCCCCC RGVHRQPTFYGSRPVRLPEVGHYYPGSNRLPGYGRLEVEPPANRPLPKPAESFRQSWEVE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCC SRPPQPAAAPLPMDPPQVIIAPPLDERGGRPPYEPNFRGPRG CCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA