| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749318
Identifier: 86749318
GI number: 86749318
Start: 2491529
End: 2491921
Strand: Direct
Name: 86749318
Synonym: RPB_2198
Alternate gene names: NA
Gene position: 2491529-2491921 (Clockwise)
Preceding gene: 86749313
Following gene: 86749319
Centisome position: 46.73
GC content: 71.5
Gene sequence:
>393_bases GTGTCCGCTTCGATCCGCCGCATCGCGCTCGCGCTGCTCGTCGCAGTCCCGCTCGGCGGCTGCGTCACCAGCGCCGGGCC GGGCGACGGCGGCGCCGCGGTGCAGCCGTTTCCGGCGAATTATCGCAGCGAGATCCCGGCGTTTCTGCGCAGCTATCTGA ACAACCCGGCGGGACTGCGCGACGCCGCGATGGCCGAGCCGGTGCAGCGCCCGCTCGGCGGGCAAGTGCGCTACGTGTCC TGTCTGCGCTTCACCCCGCCCGCCGCCAAGCCGCAGCAACTCGCGATCGTCCATGTCGACGGCCGGCTCGACCGCGTCGC CGCCAACCCCCAGGAGCTGTGCGCCGGCGTCGTCACCGCGCCGTTTCCGGAACTGGAAAAATTGTCGCGATAG
Upstream 100 bases:
>100_bases GAAGCGCGCCGCGCGCGATCACATGCCACGGCGGAATCGTTGATTTCCGCGGCGAACCGGCTATGGCTTGGGCGTCCCGC CGCCGATTCATGAGCCCGCC
Downstream 100 bases:
>100_bases ACCCGACCAAATCGCAATCCGCCGCGACTAATCTGTCGACCGGCGCTTCTTACGCGCGAGTTCCCGAGCGCTATGTCGCC GTCACAGTCGCGCTCGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSASIRRIALALLVAVPLGGCVTSAGPGDGGAAVQPFPANYRSEIPAFLRSYLNNPAGLRDAAMAEPVQRPLGGQVRYVS CLRFTPPAAKPQQLAIVHVDGRLDRVAANPQELCAGVVTAPFPELEKLSR
Sequences:
>Translated_130_residues MSASIRRIALALLVAVPLGGCVTSAGPGDGGAAVQPFPANYRSEIPAFLRSYLNNPAGLRDAAMAEPVQRPLGGQVRYVS CLRFTPPAAKPQQLAIVHVDGRLDRVAANPQELCAGVVTAPFPELEKLSR >Mature_129_residues SASIRRIALALLVAVPLGGCVTSAGPGDGGAAVQPFPANYRSEIPAFLRSYLNNPAGLRDAAMAEPVQRPLGGQVRYVSC LRFTPPAAKPQQLAIVHVDGRLDRVAANPQELCAGVVTAPFPELEKLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13659; Mature: 13528
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASIRRIALALLVAVPLGGCVTSAGPGDGGAAVQPFPANYRSEIPAFLRSYLNNPAGLR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DAAMAEPVQRPLGGQVRYVSCLRFTPPAAKPQQLAIVHVDGRLDRVAANPQELCAGVVTA HHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHCCCHHHHHHHHHCC PFPELEKLSR CCCCHHHHCC >Mature Secondary Structure SASIRRIALALLVAVPLGGCVTSAGPGDGGAAVQPFPANYRSEIPAFLRSYLNNPAGLR CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DAAMAEPVQRPLGGQVRYVSCLRFTPPAAKPQQLAIVHVDGRLDRVAANPQELCAGVVTA HHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHCCCHHHHHHHHHCC PFPELEKLSR CCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA