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The map label for this gene is ybcL [H]

Identifier: 86749291

GI number: 86749291

Start: 2465193

End: 2466311

Strand: Direct

Name: ybcL [H]

Synonym: RPB_2170

Alternate gene names: 86749291

Gene position: 2465193-2466311 (Clockwise)

Preceding gene: 86749290

Following gene: 86749292

Centisome position: 46.24

GC content: 70.51

Gene sequence:

>1119_bases
ATGCTCGGCAATTTCGTCACCGGAACCGCGGTTCTGGCGCCGGCCGGCATGCTCGGCGAATTGTCCCAGGGCCTCGGCGT
CAGCATCCGCGACGCCGGCCTTCTGATCACCTTCGGCGCGGTGGTGCTGTGCATCGGCTCGCCGCTGTCGGCGTGGCTGA
CCTCTAGGATCGACCGCCGGCTGCTGCTGACGACGACGCTCTTGGTGCTGGCGCTCGGCAATCTCGCCTCGGCCTTGGCG
CCGAACTACGCCGTGTTGCTGGCCCTGCGGATCGCGATGCTCGCGGTCGGGGCGCTGTATACGCCACAGGCGGCCGGCGC
GGTGGCGCTGCTGGTGGCGCCGGAGAAGCGCGGCGGCACCATGGCCTATGTGTTTCTCGGCTGGTCGCTGGCGGTGGCGC
TGGGGGTGCCGATGGTCGCCTTCGTCGCCGGCCATTTCGGCTGGCGCGAGGCCTATGGCCTGCTCGGCGCGATCGGCCTG
ATGTCGTTCGTGCTGCTGTGGGCGCGGCTGCCGGGCGGGCTGCGCGCGACGCCGGTCGATCTGTCGACCTGGGCCGCGGT
CGGGCGCAACCGCCGGGTTCTCAAGCTGCTCGGCGTGTCGTCGCTGCAGACCTCCGGGCAGTTCGTGGTGTTCACCTATT
TCGGGCCGCTGCTGACCGGGCTCACCGGCGCCGGCCCCGCCGAGATCGGGCTGGTGTTCGCGCTCTACGGCGTGTTCGGC
TTCGTCGGCAGCGTGATCGCCAGCCGGATCGTCGACGGCTGGGGCTCCTACAACACTTCGGCGCTGTTCACCGCCTTCAT
GCTCGCCGGCATCGCCGGCTGGACGTTCGGCGCCGGCCATTTCGCCGTGATGGCGGCGTCGGTGGCGATCTGGGGGCTGG
GCTTCGCGGCGGCGAATTCGATGCAGCAGGTGCGGCTGCTCACCGCCGATCCGGCGCTGGCGGGCGTCACCGTGTCGCTC
AACACCTCGGTGCTGTATGTCGGCCAGGCGATCGGCTCGGCGATCGGCGGCGCGCTGTTCGCGGCCGGCCTGATGCACGT
CAACGGCTACGTCTCGACCGCGGTGATGACCTGCGCGCTGCTCGCGGTGCTGTTCGCGACGCGGGAGACCAATCGGTAA

Upstream 100 bases:

>100_bases
ATGGCGGCGCCGCGCGGACCGTCCGCAAATTTTAATGCACCTGCATTGAAATCCTGCTAGACCCCTCGGCGTGTCCCGCT
CTTTCGCCCCCTCCGCCCTG

Downstream 100 bases:

>100_bases
TCAATAACCGTTTCGGCCCGGCATACCGTTCCAAAAATTCCTAGTTTACAGCTTTGGGTTGCTTTACTCTCTGGCTTAGT
AAGCTGCGATACGCGCGGCC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MLGNFVTGTAVLAPAGMLGELSQGLGVSIRDAGLLITFGAVVLCIGSPLSAWLTSRIDRRLLLTTTLLVLALGNLASALA
PNYAVLLALRIAMLAVGALYTPQAAGAVALLVAPEKRGGTMAYVFLGWSLAVALGVPMVAFVAGHFGWREAYGLLGAIGL
MSFVLLWARLPGGLRATPVDLSTWAAVGRNRRVLKLLGVSSLQTSGQFVVFTYFGPLLTGLTGAGPAEIGLVFALYGVFG
FVGSVIASRIVDGWGSYNTSALFTAFMLAGIAGWTFGAGHFAVMAASVAIWGLGFAAANSMQQVRLLTADPALAGVTVSL
NTSVLYVGQAIGSAIGGALFAAGLMHVNGYVSTAVMTCALLAVLFATRETNR

Sequences:

>Translated_372_residues
MLGNFVTGTAVLAPAGMLGELSQGLGVSIRDAGLLITFGAVVLCIGSPLSAWLTSRIDRRLLLTTTLLVLALGNLASALA
PNYAVLLALRIAMLAVGALYTPQAAGAVALLVAPEKRGGTMAYVFLGWSLAVALGVPMVAFVAGHFGWREAYGLLGAIGL
MSFVLLWARLPGGLRATPVDLSTWAAVGRNRRVLKLLGVSSLQTSGQFVVFTYFGPLLTGLTGAGPAEIGLVFALYGVFG
FVGSVIASRIVDGWGSYNTSALFTAFMLAGIAGWTFGAGHFAVMAASVAIWGLGFAAANSMQQVRLLTADPALAGVTVSL
NTSVLYVGQAIGSAIGGALFAAGLMHVNGYVSTAVMTCALLAVLFATRETNR
>Mature_372_residues
MLGNFVTGTAVLAPAGMLGELSQGLGVSIRDAGLLITFGAVVLCIGSPLSAWLTSRIDRRLLLTTTLLVLALGNLASALA
PNYAVLLALRIAMLAVGALYTPQAAGAVALLVAPEKRGGTMAYVFLGWSLAVALGVPMVAFVAGHFGWREAYGLLGAIGL
MSFVLLWARLPGGLRATPVDLSTWAAVGRNRRVLKLLGVSSLQTSGQFVVFTYFGPLLTGLTGAGPAEIGLVFALYGVFG
FVGSVIASRIVDGWGSYNTSALFTAFMLAGIAGWTFGAGHFAVMAASVAIWGLGFAAANSMQQVRLLTADPALAGVTVSL
NTSVLYVGQAIGSAIGGALFAAGLMHVNGYVSTAVMTCALLAVLFATRETNR

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=324, Percent_Identity=29.9382716049383, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786595, Length=355, Percent_Identity=23.0985915492958, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI145693198, Length=336, Percent_Identity=26.1904761904762, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1787808, Length=227, Percent_Identity=22.9074889867841, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 38150; Mature: 38150

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGNFVTGTAVLAPAGMLGELSQGLGVSIRDAGLLITFGAVVLCIGSPLSAWLTSRIDRR
CCCCCCCCHHHHCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LLLTTTLLVLALGNLASALAPNYAVLLALRIAMLAVGALYTPQAAGAVALLVAPEKRGGT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCE
MAYVFLGWSLAVALGVPMVAFVAGHFGWREAYGLLGAIGLMSFVLLWARLPGGLRATPVD
EEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LSTWAAVGRNRRVLKLLGVSSLQTSGQFVVFTYFGPLLTGLTGAGPAEIGLVFALYGVFG
HHHHHHHCCCCCEEEECCCHHHCCCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHH
FVGSVIASRIVDGWGSYNTSALFTAFMLAGIAGWTFGAGHFAVMAASVAIWGLGFAAANS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
MQQVRLLTADPALAGVTVSLNTSVLYVGQAIGSAIGGALFAAGLMHVNGYVSTAVMTCAL
HHHEEEEECCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVLFATRETNR
HHHHHHHHCCCC
>Mature Secondary Structure
MLGNFVTGTAVLAPAGMLGELSQGLGVSIRDAGLLITFGAVVLCIGSPLSAWLTSRIDRR
CCCCCCCCHHHHCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LLLTTTLLVLALGNLASALAPNYAVLLALRIAMLAVGALYTPQAAGAVALLVAPEKRGGT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCE
MAYVFLGWSLAVALGVPMVAFVAGHFGWREAYGLLGAIGLMSFVLLWARLPGGLRATPVD
EEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LSTWAAVGRNRRVLKLLGVSSLQTSGQFVVFTYFGPLLTGLTGAGPAEIGLVFALYGVFG
HHHHHHHCCCCCEEEECCCHHHCCCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHH
FVGSVIASRIVDGWGSYNTSALFTAFMLAGIAGWTFGAGHFAVMAASVAIWGLGFAAANS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
MQQVRLLTADPALAGVTVSLNTSVLYVGQAIGSAIGGALFAAGLMHVNGYVSTAVMTCAL
HHHEEEEECCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVLFATRETNR
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]