| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is dmfA2 [H]
Identifier: 86749174
GI number: 86749174
Start: 2331334
End: 2333652
Strand: Direct
Name: dmfA2 [H]
Synonym: RPB_2052
Alternate gene names: 86749174
Gene position: 2331334-2333652 (Clockwise)
Preceding gene: 86749173
Following gene: 86749176
Centisome position: 43.73
GC content: 63.26
Gene sequence:
>2319_bases ATGGCCGAAAAGAAAGTATTTGGATACGCGGACAAGATTTCGGTCAAGCCCGGCGACGACATCTCGTTCTTCGTGCACGC CGATGGCACCGACGTCGTCGACGCGCAGCTGGTGCGACTGATCCATGGCGACGCGCATCCGGCCGGACCGGGCTATCGGG AGGAGGAGATCGCCTGCGAAGCCAACGGGGTGTGGCGGGTTCGCAAGCAGTTCACCCAGGTCGGCTCGTTTCTCACCGTG GCCGATCCGGAACAGCGCCTCGCGCCGAACGGCAGCTTCAGTCTCTGTATCTTCGTGCATCCGAACAGCCCGGGCGGCGG CCGACGGCAATGCCTGCTCGGCAAGTGGGACGCGTTCGGCAACCGTGGCTACGGTTTGTGGCTCAACCCGGACGGCTTTC TCGAATTCGGCTTCGGCGACGGCCACGAGGTCGACTATCTCGACGCCGAAGTGCCGGTTCTGAAGAACAACTGGTACTTC GTCGCGGCGACGTTCGACGCAACGACCGGCGTGGCGACGCTGTATCAGGAGGGGGTAGCGACCCGCTATAACTCGCTGCT GAGCAAGGTCGCCAATGTCGACTTCCGCTCGCATGTGCGCGAGACGTTGCGATTCCGCCCGGTCAATCCGCCGGACGTGC CGTTCCTGCTCGCGGGCGCGCGGGATCATCACACGCTGCGCGGCGATTTCGTCACCCAATGCCTGAACGGCAAACTGGAC CGGCCCGCGGTGTTCGATCGGGTGCTGACGCATGACGAACTCGACCGCTATCGCGACACCGGGCTGGCGCCGCAGAATGG CCTGCTGGCCTATTGGGACACGGCGCAGGGCTACACCGCGCAGGGCATCGGCGATCGGGTCATCGATGTCGGGCCCTATG GATTGCACGCCGAGGGCTACAATCGCCCGGTGCGCGCGCAGACCGGGTTCAACTGGCAGGGCCGCGACGACTGCTTCCGG CTCGCGCCCGAGCAATATGGTGGCATCGAGTTTCACGACGATGCCATCATCGATTGCAAGTGGGAGCTGACGCGGTCGAT CAAGCTGCCGGATCTGCGCAGCGGCGCCTATGCGTTCCGGCTGCGCACCGGCGACGCCAAGGGCATGCGCGAGGAATACA TCGTGTTCTTCGTCCGCTCCGTCGCGCCGAAAGCGCCGATTCTGTTTCTGGTGCCGACGGGCAGCTACCTGGCCTATGCC AACGAGCATCTCAGTTTCGACGCTGAGATCATGCAGCCGCTCGCCGGACAATCACCGATCCTCTCCGAGGTCGACATCGA ATTGTACCAGACCGCCGAGTTCGGTCTGTCGCTGTACGACCATCACGCCGATGGCGCAGGCGTCTGCTACAGCACCTATC GCCGGCCGATCCTGAATATGCGTCCGAAGGCGCGGATGTCGTCGATGGGCGTGACCTGGCAGTTCCCGGCGGATCTGTCG ATCATCGCCTGGCTCGAGCACATGGGCTACGACTACGATTTGACGACCGACGAGGATCTGCATCGGGAGGGGGCCGATGC GCTGAAGCCGTACAATGTGGTGCTGAGCGGGACGCATCCGGAATACACCTCGGAAGCGATGCTCGATGCCACCGAAGACT ACATCGCCGCCGGCGGCCGGTTCATCTATCTCGGCGGCAACGGCTTCTATTGGAACGTCGGCTACCACAGCGATGATCCG TGGTGCATGGAAGTGCGGAAGCTGAATTCCGGCATGCGGGCATGGCAGGCGCGCCCCGGCGAGTACTATCTGGCGACGAC CGGTCAGAAGAGCGGCCTGTGGAAGGATCTCGGGCGGCCGCCGCAGAAGATCTTCGGCGTCGGCTTCATCTCGGAAGGTT TCGATTCGGCGCGGCCGTTCCGGCGGATGCCGGATAGCTGGCATCGCCGCGTGTCATGGATTATGGACGGCATCGAGGGC GAGATCATCGGCGATTTCGGTCTGGCGCAGGGCGCCGCCGGCGGCATCGAGATTGATCGCTACGATCTGACGCTCGGCAC CCCGCCGCATTCGCTGATCGTCGCCTCTTCCGGCGGACACAGCGACAACTATCAGACAGTGGTGGAGGAGGTGCTCTATC CCTATCCAGGGCTGTCCGGATCGCACGACTATCGTGTGCGGGCCGACATGGTCTATTTCACGGCTCCGAATGACGGCGCG GTGTTTTCGACCGGATCGATCGCCTTCAGTCAATCTTTGCCGTACCAGAATTTCGACAACAACGTATCGCGCCTGCTGGC GAACGTCGTCACGGCATTCAGCAAGCCGGGGAAACTGCCGGGTTGGGCGTGGTCGGCCGAGGAAAAGCAATGGCGATGA
Upstream 100 bases:
>100_bases GAGACGCCGGACGAAGCCTATCACGCGCTGTTCCTGCGTCGCGTCCAGGATCTGCTCGAAACCTAATCCGCTCTGTCAGT CGCTGGAGAAGCCTGAGGCC
Downstream 100 bases:
>100_bases GTCCGCCGGGCCGGTGAATTTGGGGAGTTGCGGTGGCGTACTCCGCCGCAAACAGCGGCGATCTGTCGCGCGAGGCAAGG GTCGGTCGTGTTATCTCAGT
Product: large subunit of N,N-dimethylformamidase
Products: NA
Alternate protein names: N,N-dimethylformamidase heavy chain [H]
Number of amino acids: Translated: 772; Mature: 771
Protein sequence:
>772_residues MAEKKVFGYADKISVKPGDDISFFVHADGTDVVDAQLVRLIHGDAHPAGPGYREEEIACEANGVWRVRKQFTQVGSFLTV ADPEQRLAPNGSFSLCIFVHPNSPGGGRRQCLLGKWDAFGNRGYGLWLNPDGFLEFGFGDGHEVDYLDAEVPVLKNNWYF VAATFDATTGVATLYQEGVATRYNSLLSKVANVDFRSHVRETLRFRPVNPPDVPFLLAGARDHHTLRGDFVTQCLNGKLD RPAVFDRVLTHDELDRYRDTGLAPQNGLLAYWDTAQGYTAQGIGDRVIDVGPYGLHAEGYNRPVRAQTGFNWQGRDDCFR LAPEQYGGIEFHDDAIIDCKWELTRSIKLPDLRSGAYAFRLRTGDAKGMREEYIVFFVRSVAPKAPILFLVPTGSYLAYA NEHLSFDAEIMQPLAGQSPILSEVDIELYQTAEFGLSLYDHHADGAGVCYSTYRRPILNMRPKARMSSMGVTWQFPADLS IIAWLEHMGYDYDLTTDEDLHREGADALKPYNVVLSGTHPEYTSEAMLDATEDYIAAGGRFIYLGGNGFYWNVGYHSDDP WCMEVRKLNSGMRAWQARPGEYYLATTGQKSGLWKDLGRPPQKIFGVGFISEGFDSARPFRRMPDSWHRRVSWIMDGIEG EIIGDFGLAQGAAGGIEIDRYDLTLGTPPHSLIVASSGGHSDNYQTVVEEVLYPYPGLSGSHDYRVRADMVYFTAPNDGA VFSTGSIAFSQSLPYQNFDNNVSRLLANVVTAFSKPGKLPGWAWSAEEKQWR
Sequences:
>Translated_772_residues MAEKKVFGYADKISVKPGDDISFFVHADGTDVVDAQLVRLIHGDAHPAGPGYREEEIACEANGVWRVRKQFTQVGSFLTV ADPEQRLAPNGSFSLCIFVHPNSPGGGRRQCLLGKWDAFGNRGYGLWLNPDGFLEFGFGDGHEVDYLDAEVPVLKNNWYF VAATFDATTGVATLYQEGVATRYNSLLSKVANVDFRSHVRETLRFRPVNPPDVPFLLAGARDHHTLRGDFVTQCLNGKLD RPAVFDRVLTHDELDRYRDTGLAPQNGLLAYWDTAQGYTAQGIGDRVIDVGPYGLHAEGYNRPVRAQTGFNWQGRDDCFR LAPEQYGGIEFHDDAIIDCKWELTRSIKLPDLRSGAYAFRLRTGDAKGMREEYIVFFVRSVAPKAPILFLVPTGSYLAYA NEHLSFDAEIMQPLAGQSPILSEVDIELYQTAEFGLSLYDHHADGAGVCYSTYRRPILNMRPKARMSSMGVTWQFPADLS IIAWLEHMGYDYDLTTDEDLHREGADALKPYNVVLSGTHPEYTSEAMLDATEDYIAAGGRFIYLGGNGFYWNVGYHSDDP WCMEVRKLNSGMRAWQARPGEYYLATTGQKSGLWKDLGRPPQKIFGVGFISEGFDSARPFRRMPDSWHRRVSWIMDGIEG EIIGDFGLAQGAAGGIEIDRYDLTLGTPPHSLIVASSGGHSDNYQTVVEEVLYPYPGLSGSHDYRVRADMVYFTAPNDGA VFSTGSIAFSQSLPYQNFDNNVSRLLANVVTAFSKPGKLPGWAWSAEEKQWR >Mature_771_residues AEKKVFGYADKISVKPGDDISFFVHADGTDVVDAQLVRLIHGDAHPAGPGYREEEIACEANGVWRVRKQFTQVGSFLTVA DPEQRLAPNGSFSLCIFVHPNSPGGGRRQCLLGKWDAFGNRGYGLWLNPDGFLEFGFGDGHEVDYLDAEVPVLKNNWYFV AATFDATTGVATLYQEGVATRYNSLLSKVANVDFRSHVRETLRFRPVNPPDVPFLLAGARDHHTLRGDFVTQCLNGKLDR PAVFDRVLTHDELDRYRDTGLAPQNGLLAYWDTAQGYTAQGIGDRVIDVGPYGLHAEGYNRPVRAQTGFNWQGRDDCFRL APEQYGGIEFHDDAIIDCKWELTRSIKLPDLRSGAYAFRLRTGDAKGMREEYIVFFVRSVAPKAPILFLVPTGSYLAYAN EHLSFDAEIMQPLAGQSPILSEVDIELYQTAEFGLSLYDHHADGAGVCYSTYRRPILNMRPKARMSSMGVTWQFPADLSI IAWLEHMGYDYDLTTDEDLHREGADALKPYNVVLSGTHPEYTSEAMLDATEDYIAAGGRFIYLGGNGFYWNVGYHSDDPW CMEVRKLNSGMRAWQARPGEYYLATTGQKSGLWKDLGRPPQKIFGVGFISEGFDSARPFRRMPDSWHRRVSWIMDGIEGE IIGDFGLAQGAAGGIEIDRYDLTLGTPPHSLIVASSGGHSDNYQTVVEEVLYPYPGLSGSHDYRVRADMVYFTAPNDGAV FSTGSIAFSQSLPYQNFDNNVSRLLANVVTAFSKPGKLPGWAWSAEEKQWR
Specific function: Hydrolyzes N,N-dimethylformamide, and to a lesser extent N,N-dimethylacetamide and N,N-diethylacetamide. Has no activity against the substituted amides N-methylformamide, N- ethylformamide, N-ethylformamide and N-methylacetamide or the unsubstituted amide
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 [H]
Pfam domain/function: NA
EC number: =3.5.1.56 [H]
Molecular weight: Translated: 86094; Mature: 85963
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKKVFGYADKISVKPGDDISFFVHADGTDVVDAQLVRLIHGDAHPAGPGYREEEIACE CCCCCEECCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEC ANGVWRVRKQFTQVGSFLTVADPEQRLAPNGSFSLCIFVHPNSPGGGRRQCLLGKWDAFG CCCHHHHHHHHHHHCCEEEECCCHHHCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCC NRGYGLWLNPDGFLEFGFGDGHEVDYLDAEVPVLKNNWYFVAATFDATTGVATLYQEGVA CCCEEEEECCCCCEEECCCCCCCEEEECCCCCEEECCEEEEEEECCCCCHHHHHHHHHHH TRYNSLLSKVANVDFRSHVRETLRFRPVNPPDVPFLLAGARDHHTLRGDFVTQCLNGKLD HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCC RPAVFDRVLTHDELDRYRDTGLAPQNGLLAYWDTAQGYTAQGIGDRVIDVGPYGLHAEGY CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEECCCCCCEEEECCCCEECCCC NRPVRAQTGFNWQGRDDCFRLAPEQYGGIEFHDDAIIDCKWELTRSIKLPDLRSGAYAFR CCCEECCCCCCCCCCCHHHHCCHHHCCCEEECCCCEEEEEEEEECCCCCCCCCCCCEEEE LRTGDAKGMREEYIVFFVRSVAPKAPILFLVPTGSYLAYANEHLSFDAEIMQPLAGQSPI EECCCCCCCHHHHHEEEEHHCCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHCCCCCC LSEVDIELYQTAEFGLSLYDHHADGAGVCYSTYRRPILNMRPKARMSSMGVTWQFPADLS CHHCCEEEEEEHHHCCEEEECCCCCCCEEHHHHCCCCCCCCCCHHHHHCCEEEECCCCCH IIAWLEHMGYDYDLTTDEDLHREGADALKPYNVVLSGTHPEYTSEAMLDATEDYIAAGGR HHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCHHHHHCCCE FIYLGGNGFYWNVGYHSDDPWCMEVRKLNSGMRAWQARPGEYYLATTGQKSGLWKDLGRP EEEECCCEEEEECCCCCCCCHHHHHHHHHCHHHHHHCCCCCEEEEECCCCCCCHHHHCCC PQKIFGVGFISEGFDSARPFRRMPDSWHRRVSWIMDGIEGEIIGDFGLAQGAAGGIEIDR HHHHEEECCHHCCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEE YDLTLGTPPHSLIVASSGGHSDNYQTVVEEVLYPYPGLSGSHDYRVRADMVYFTAPNDGA EEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCC VFSTGSIAFSQSLPYQNFDNNVSRLLANVVTAFSKPGKLPGWAWSAEEKQWR EEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCC >Mature Secondary Structure AEKKVFGYADKISVKPGDDISFFVHADGTDVVDAQLVRLIHGDAHPAGPGYREEEIACE CCCCEECCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEC ANGVWRVRKQFTQVGSFLTVADPEQRLAPNGSFSLCIFVHPNSPGGGRRQCLLGKWDAFG CCCHHHHHHHHHHHCCEEEECCCHHHCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCC NRGYGLWLNPDGFLEFGFGDGHEVDYLDAEVPVLKNNWYFVAATFDATTGVATLYQEGVA CCCEEEEECCCCCEEECCCCCCCEEEECCCCCEEECCEEEEEEECCCCCHHHHHHHHHHH TRYNSLLSKVANVDFRSHVRETLRFRPVNPPDVPFLLAGARDHHTLRGDFVTQCLNGKLD HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCC RPAVFDRVLTHDELDRYRDTGLAPQNGLLAYWDTAQGYTAQGIGDRVIDVGPYGLHAEGY CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEECCCCCCEEEECCCCEECCCC NRPVRAQTGFNWQGRDDCFRLAPEQYGGIEFHDDAIIDCKWELTRSIKLPDLRSGAYAFR CCCEECCCCCCCCCCCHHHHCCHHHCCCEEECCCCEEEEEEEEECCCCCCCCCCCCEEEE LRTGDAKGMREEYIVFFVRSVAPKAPILFLVPTGSYLAYANEHLSFDAEIMQPLAGQSPI EECCCCCCCHHHHHEEEEHHCCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHCCCCCC LSEVDIELYQTAEFGLSLYDHHADGAGVCYSTYRRPILNMRPKARMSSMGVTWQFPADLS CHHCCEEEEEEHHHCCEEEECCCCCCCEEHHHHCCCCCCCCCCHHHHHCCEEEECCCCCH IIAWLEHMGYDYDLTTDEDLHREGADALKPYNVVLSGTHPEYTSEAMLDATEDYIAAGGR HHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCHHHHHCCCE FIYLGGNGFYWNVGYHSDDPWCMEVRKLNSGMRAWQARPGEYYLATTGQKSGLWKDLGRP EEEECCCEEEEECCCCCCCCHHHHHHHHHCHHHHHHCCCCCEEEEECCCCCCCHHHHCCC PQKIFGVGFISEGFDSARPFRRMPDSWHRRVSWIMDGIEGEIIGDFGLAQGAAGGIEIDR HHHHEEECCHHCCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEE YDLTLGTPPHSLIVASSGGHSDNYQTVVEEVLYPYPGLSGSHDYRVRADMVYFTAPNDGA EEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCC VFSTGSIAFSQSLPYQNFDNNVSRLLANVVTAFSKPGKLPGWAWSAEEKQWR EEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA