| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749140
Identifier: 86749140
GI number: 86749140
Start: 2296613
End: 2297041
Strand: Direct
Name: 86749140
Synonym: RPB_2017
Alternate gene names: NA
Gene position: 2296613-2297041 (Clockwise)
Preceding gene: 86749138
Following gene: 86749147
Centisome position: 43.08
GC content: 68.3
Gene sequence:
>429_bases ATGGAACCGAACCGGTCGCTGCGAGTTGATGTGCGGCAAGTCTGCTCCGACGATCGATCGGGGGACAATCCCGAAGGATT CACATCAATGAGAACGAAAACCAAGACGCTCGCCATTCGCGCCGACCAGTCGTCGCTGAAGGCGATGCTGGCCGCAGCCG CGCTGGCGCTGGCGCTGCTGGCGATCCCGACGATCGGCCATGCCCAGGGCATCGTCCGCGGCGCGCAGGAAGGCTCGCGC GAAGGCAATCGCGCGGCTGGGCCGGTGGGCGGTGTGGTCGGCGGCGCGATCGGCGCCGGCGTCGGCGGCGCGGTGGGTGC GGTCAACGGCGTGCTCGGTCTTCCGAACCGCGGCGTGCGCTATCATCGCGGCCATCGCTGCAAGGGCTACTACACCCGCA GCGGCAATTTCCGCTGCTATCGCCGCTGA
Upstream 100 bases:
>100_bases TCCAGTGCCGGCCGCGCCGCAGGTCGAAAACCGTGGGCATCGTTAATTCGCCGCTGCGCCGGGCGGGGCCAAGACCGAGC TGCGGCAAAATCGGGGCTGG
Downstream 100 bases:
>100_bases TCCGGCGAAGGTTTCCAAAGAAGGCGCGGCCGTTCGGGTCGCGCCTTTTTCTTTGTCCGATCGCTCGGCATCCGGACCAT CAGGCCTTCAGCCGGTAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MEPNRSLRVDVRQVCSDDRSGDNPEGFTSMRTKTKTLAIRADQSSLKAMLAAAALALALLAIPTIGHAQGIVRGAQEGSR EGNRAAGPVGGVVGGAIGAGVGGAVGAVNGVLGLPNRGVRYHRGHRCKGYYTRSGNFRCYRR
Sequences:
>Translated_142_residues MEPNRSLRVDVRQVCSDDRSGDNPEGFTSMRTKTKTLAIRADQSSLKAMLAAAALALALLAIPTIGHAQGIVRGAQEGSR EGNRAAGPVGGVVGGAIGAGVGGAVGAVNGVLGLPNRGVRYHRGHRCKGYYTRSGNFRCYRR >Mature_142_residues MEPNRSLRVDVRQVCSDDRSGDNPEGFTSMRTKTKTLAIRADQSSLKAMLAAAALALALLAIPTIGHAQGIVRGAQEGSR EGNRAAGPVGGVVGGAIGAGVGGAVGAVNGVLGLPNRGVRYHRGHRCKGYYTRSGNFRCYRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14804; Mature: 14804
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPNRSLRVDVRQVCSDDRSGDNPEGFTSMRTKTKTLAIRADQSSLKAMLAAAALALALL CCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHH AIPTIGHAQGIVRGAQEGSREGNRAAGPVGGVVGGAIGAGVGGAVGAVNGVLGLPNRGVR HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC YHRGHRCKGYYTRSGNFRCYRR CCCCCCCCEEEECCCCEEEECC >Mature Secondary Structure MEPNRSLRVDVRQVCSDDRSGDNPEGFTSMRTKTKTLAIRADQSSLKAMLAAAALALALL CCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHH AIPTIGHAQGIVRGAQEGSREGNRAAGPVGGVVGGAIGAGVGGAVGAVNGVLGLPNRGVR HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC YHRGHRCKGYYTRSGNFRCYRR CCCCCCCCEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA