| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fic [C]
Identifier: 86749106
GI number: 86749106
Start: 2252409
End: 2252978
Strand: Direct
Name: fic [C]
Synonym: RPB_1983
Alternate gene names: 86749106
Gene position: 2252409-2252978 (Clockwise)
Preceding gene: 86749105
Following gene: 86749107
Centisome position: 42.25
GC content: 53.86
Gene sequence:
>570_bases ATGTATGATGCGGTTGCCGATCCGTATTGCTATCCCGGCACCGCCGTTCTGAAGAACCTACTCGATATTCGGGATCAGGC TACGCTCGATCAGTACGAAGCTGAAGTGACGGCAGCCAGGGCCGAACAACCATTTCCTTCTGGGAAGCTCGATACGGTGC ACTATTGCCGTTTTCACCACCATTTGTTTCAGGATGTGTTTGAGTGGGCTGGACGATATCGCACTGTCCGGATTGCTAAA GGCGAGAATTACTTCTGCTATCCCGAGTACATTGCCGTGCAGATGAATCGTCTGTTTTCCGATCTGCGCCGCAGCAATTT CTTCCAGGGCCAGTCCGCTACAAAGTTCGCCGATACTGGAGGACACTTTCTAGCAGAGCTCAATTCGATCCATCCTTTTC GCGAAGGCAACGGACGCGCGCAACTCGCGTTCTTCGCCCATCTTGCAGATCACGCGGGTCGCCCCCTGCAGTTGAAGCGG TTAGACCCGGATGTCTTTATGACGGCGATGATTGCGAGCTTCCTCGGTGATGAGGCCCCTCTAACGGAAGTGATCGCAGA CCTTCTGTAG
Upstream 100 bases:
>100_bases TCAGACGCGATGCATCGGCGTGCGAAAGAATCGGAACGTCTGGGCCACTCCGCGGAAGAGCGGATCGCTCACATCAAGCG AGCTTACCGCAAGGGCTAGC
Downstream 100 bases:
>100_bases GGAGAATGGCGAAGGGCCCGGCGCATCACGCCGAGCCCTTCATTCAACAAGTATCAGTCGGCCTGTAAGCCGGGTTCTGG AGGGCACCGCTCGCCGTGAG
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MYDAVADPYCYPGTAVLKNLLDIRDQATLDQYEAEVTAARAEQPFPSGKLDTVHYCRFHHHLFQDVFEWAGRYRTVRIAK GENYFCYPEYIAVQMNRLFSDLRRSNFFQGQSATKFADTGGHFLAELNSIHPFREGNGRAQLAFFAHLADHAGRPLQLKR LDPDVFMTAMIASFLGDEAPLTEVIADLL
Sequences:
>Translated_189_residues MYDAVADPYCYPGTAVLKNLLDIRDQATLDQYEAEVTAARAEQPFPSGKLDTVHYCRFHHHLFQDVFEWAGRYRTVRIAK GENYFCYPEYIAVQMNRLFSDLRRSNFFQGQSATKFADTGGHFLAELNSIHPFREGNGRAQLAFFAHLADHAGRPLQLKR LDPDVFMTAMIASFLGDEAPLTEVIADLL >Mature_189_residues MYDAVADPYCYPGTAVLKNLLDIRDQATLDQYEAEVTAARAEQPFPSGKLDTVHYCRFHHHLFQDVFEWAGRYRTVRIAK GENYFCYPEYIAVQMNRLFSDLRRSNFFQGQSATKFADTGGHFLAELNSIHPFREGNGRAQLAFFAHLADHAGRPLQLKR LDPDVFMTAMIASFLGDEAPLTEVIADLL
Specific function: Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins [H]
COG id: COG2184
COG function: function code D; Protein involved in cell division
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
Organism=Escherichia coli, GI1789761, Length=187, Percent_Identity=35.8288770053476, Blast_Score=124, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 21514; Mature: 21514
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDAVADPYCYPGTAVLKNLLDIRDQATLDQYEAEVTAARAEQPFPSGKLDTVHYCRFHH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH HLFQDVFEWAGRYRTVRIAKGENYFCYPEYIAVQMNRLFSDLRRSNFFQGQSATKFADTG HHHHHHHHHHCCEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC GHFLAELNSIHPFREGNGRAQLAFFAHLADHAGRPLQLKRLDPDVFMTAMIASFLGDEAP CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCC LTEVIADLL HHHHHHHHC >Mature Secondary Structure MYDAVADPYCYPGTAVLKNLLDIRDQATLDQYEAEVTAARAEQPFPSGKLDTVHYCRFHH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH HLFQDVFEWAGRYRTVRIAKGENYFCYPEYIAVQMNRLFSDLRRSNFFQGQSATKFADTG HHHHHHHHHHCCEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC GHFLAELNSIHPFREGNGRAQLAFFAHLADHAGRPLQLKRLDPDVFMTAMIASFLGDEAP CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCC LTEVIADLL HHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]