Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749032

Identifier: 86749032

GI number: 86749032

Start: 2182023

End: 2183207

Strand: Direct

Name: 86749032

Synonym: RPB_1909

Alternate gene names: NA

Gene position: 2182023-2183207 (Clockwise)

Preceding gene: 86749028

Following gene: 86749036

Centisome position: 40.93

GC content: 68.1

Gene sequence:

>1185_bases
ATGAACGAGCTGGATGAACGATCCGATACTGAATTGCTGCAGGCGTGGCTGGACAGGGTCCGCGTAACCGGCGCCGTCGA
GCATGTCGGAGCGTTCAATCGTCTCCAAGCTGAACTGGCAAGGATCGAGCGGGAACTGATCGCGCGCGGTCGCGGCATTG
AACAGCTTCGCTCCTTGCTGACATACACCGACCCGGAGATCACCCGGAGTGCCGAGCTGGCGCTCGCCAGGGCGGAGGCA
TCCGCAAGCGCGGCGCGCGGCGGATGCCGTGCGTCCAGCGGGTGCGACGACGCGCACTCAGCGGCCGCGGGCCGACCGGC
AGGCGCCGGCATCCTCGATGATCATCCGATATTCTGGCCGGCGCGACATCCGCCCCCAGCGGCGATGGAGCTCTCCGAGA
TCGCGCAGCGCCTCATCGCCGCGTTGCCGCTGGAGGCCGCGGCGCTGCTGCGCCAGCTTCGTCCCGCGATCGGGCTGTGG
CCGCAGGCGGCGCGCGCCGACGCGCCGATCGACGGTTCCCGGCTCGGCGGCATGCCCTGCGCACCGCCGGATTGGCGCTG
GCCGGTCGCCGCGACCGAGCCGATGCTGTTTCTCGGCCAGATCAACTGCGCCGACCTGCGCGGTCTGCCGGGCGCGGAGG
CGCTGCCGTCGCAAGGCCTGCTGTCCTGCTTCGGCGACCACGACACGGTGATGGGGTGTCTGTTCACCGGGCAGGGCGGC
GCCTTGTACCATTGGCCGGACACAGAGCATCTGATCCCGGCGCAGCCGCCGCTGGAGATGCTCACGGTGTTTCCTCGCGC
CGAATTGTCGTTCCGGCCGATGTGGGACCTGCCGGACCCGGACAGCAGCGTCGTCACGGCGATCCTGCCGGATCGATCGC
GCCAGGCGCTCTACAAAAGCCTGCACAGCGACTTGCGGCGGCACGGCCTTCCCGCCGTGCTGGACTATCCGTGCAATCGC
AGCAAGCTGCTCGGCTGGCCGGATCTGCTGCAGGGTGAGAGTTTCGAGTTCACCCTCGATCAGCCGTTCGATCAGTACCG
ATTGCTGCTGCAGCTCGACGGCTACACCAACGGCAGCGAGATCGCCGACTGGGGGCCGGGCGGCTTCCTCTACTACTTCC
TGTCCAAGCAAGACCTCGCCGGACGGCGGTTCGAGACGGCGGAACTGGCAATCCAGTTCACGTGA

Upstream 100 bases:

>100_bases
GGTATACCGAACTCCTATTGATCTCACGGACGGGAAAATCCTGACTGGACTGTTCGCTCTTTGTTCCGGTAGCCTCTGGT
TCGCATCCGGGGGGCGGGGC

Downstream 100 bases:

>100_bases
GTTGCGGTGATCGCCGTGGCCTGCAGGTCGCGAAAACGGCAATGCCCGGGGCCCGGGCATCGCGAGCTTAGTTCGAAACC
GCGAACGAGCCGGCGGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MNELDERSDTELLQAWLDRVRVTGAVEHVGAFNRLQAELARIERELIARGRGIEQLRSLLTYTDPEITRSAELALARAEA
SASAARGGCRASSGCDDAHSAAAGRPAGAGILDDHPIFWPARHPPPAAMELSEIAQRLIAALPLEAAALLRQLRPAIGLW
PQAARADAPIDGSRLGGMPCAPPDWRWPVAATEPMLFLGQINCADLRGLPGAEALPSQGLLSCFGDHDTVMGCLFTGQGG
ALYHWPDTEHLIPAQPPLEMLTVFPRAELSFRPMWDLPDPDSSVVTAILPDRSRQALYKSLHSDLRRHGLPAVLDYPCNR
SKLLGWPDLLQGESFEFTLDQPFDQYRLLLQLDGYTNGSEIADWGPGGFLYYFLSKQDLAGRRFETAELAIQFT

Sequences:

>Translated_394_residues
MNELDERSDTELLQAWLDRVRVTGAVEHVGAFNRLQAELARIERELIARGRGIEQLRSLLTYTDPEITRSAELALARAEA
SASAARGGCRASSGCDDAHSAAAGRPAGAGILDDHPIFWPARHPPPAAMELSEIAQRLIAALPLEAAALLRQLRPAIGLW
PQAARADAPIDGSRLGGMPCAPPDWRWPVAATEPMLFLGQINCADLRGLPGAEALPSQGLLSCFGDHDTVMGCLFTGQGG
ALYHWPDTEHLIPAQPPLEMLTVFPRAELSFRPMWDLPDPDSSVVTAILPDRSRQALYKSLHSDLRRHGLPAVLDYPCNR
SKLLGWPDLLQGESFEFTLDQPFDQYRLLLQLDGYTNGSEIADWGPGGFLYYFLSKQDLAGRRFETAELAIQFT
>Mature_394_residues
MNELDERSDTELLQAWLDRVRVTGAVEHVGAFNRLQAELARIERELIARGRGIEQLRSLLTYTDPEITRSAELALARAEA
SASAARGGCRASSGCDDAHSAAAGRPAGAGILDDHPIFWPARHPPPAAMELSEIAQRLIAALPLEAAALLRQLRPAIGLW
PQAARADAPIDGSRLGGMPCAPPDWRWPVAATEPMLFLGQINCADLRGLPGAEALPSQGLLSCFGDHDTVMGCLFTGQGG
ALYHWPDTEHLIPAQPPLEMLTVFPRAELSFRPMWDLPDPDSSVVTAILPDRSRQALYKSLHSDLRRHGLPAVLDYPCNR
SKLLGWPDLLQGESFEFTLDQPFDQYRLLLQLDGYTNGSEIADWGPGGFLYYFLSKQDLAGRRFETAELAIQFT

Specific function: Unknown

COG id: COG3878

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43175; Mature: 43175

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELDERSDTELLQAWLDRVRVTGAVEHVGAFNRLQAELARIERELIARGRGIEQLRSLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TYTDPEITRSAELALARAEASASAARGGCRASSGCDDAHSAAAGRPAGAGILDDHPIFWP
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
ARHPPPAAMELSEIAQRLIAALPLEAAALLRQLRPAIGLWPQAARADAPIDGSRLGGMPC
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHCCCCCC
APPDWRWPVAATEPMLFLGQINCADLRGLPGAEALPSQGLLSCFGDHDTVMGCLFTGQGG
CCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCC
ALYHWPDTEHLIPAQPPLEMLTVFPRAELSFRPMWDLPDPDSSVVTAILPDRSRQALYKS
EEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH
LHSDLRRHGLPAVLDYPCNRSKLLGWPDLLQGESFEFTLDQPFDQYRLLLQLDGYTNGSE
HHHHHHHCCCCEEEECCCCCCCCCCCHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCC
IADWGPGGFLYYFLSKQDLAGRRFETAELAIQFT
CCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MNELDERSDTELLQAWLDRVRVTGAVEHVGAFNRLQAELARIERELIARGRGIEQLRSLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TYTDPEITRSAELALARAEASASAARGGCRASSGCDDAHSAAAGRPAGAGILDDHPIFWP
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
ARHPPPAAMELSEIAQRLIAALPLEAAALLRQLRPAIGLWPQAARADAPIDGSRLGGMPC
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHCCCCCC
APPDWRWPVAATEPMLFLGQINCADLRGLPGAEALPSQGLLSCFGDHDTVMGCLFTGQGG
CCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCC
ALYHWPDTEHLIPAQPPLEMLTVFPRAELSFRPMWDLPDPDSSVVTAILPDRSRQALYKS
EEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH
LHSDLRRHGLPAVLDYPCNRSKLLGWPDLLQGESFEFTLDQPFDQYRLLLQLDGYTNGSE
HHHHHHHCCCCEEEECCCCCCCCCCCHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCC
IADWGPGGFLYYFLSKQDLAGRRFETAELAIQFT
CCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA