| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749025
Identifier: 86749025
GI number: 86749025
Start: 2176272
End: 2176634
Strand: Direct
Name: 86749025
Synonym: RPB_1902
Alternate gene names: NA
Gene position: 2176272-2176634 (Clockwise)
Preceding gene: 86749023
Following gene: 86749026
Centisome position: 40.82
GC content: 68.04
Gene sequence:
>363_bases ATGACCCGCCGAACGATGACGATGGCGATGCTGATGACGCTCGGTTGCGGCGGCGTGGCGGCGGCGCAGGACGTGCCCGG CATCGAGATCTGCACCGCCGAGAAGACCATGGAGCGCCGCACCAGTTGTCTGCAGAGCAACGTCGAGTTCCTGCACAGAT CCCTCGACAAGACGCGGCGCGATCAGCAGCAGAGGCTCGACGCCGCCAATCGTCAGATCGAGGCGCTAAAATCGGCGCTG GCCGAGATGCAGACGACGCTGACCGCGTTACGGGCCGCGCCGAAGCAGCCCGAGCCCGCAGCCGCGGCGGCCAAGGACTC GGCCCCGGCCAAGAACGCCGCGCCGAAGCCCGATGCGAAGTAG
Upstream 100 bases:
>100_bases CTTGCACGCAGCGGTGAGTCCGGCAATCCGCCGCGGCCTCGGCGCGTTGACAGCCGCGTGCCGAACCCGCTTGCTGGTTC GATCAAGGATGGAGATCAGG
Downstream 100 bases:
>100_bases TGCGCAACGTGCGCGCGTTTCCATTCTGCGGAATTACGAAGTGCCGCGCGGGTTGGCAATGCGCGCCGACATGACCTAAC ATCCCCGTCAATCAGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTRRTMTMAMLMTLGCGGVAAAQDVPGIEICTAEKTMERRTSCLQSNVEFLHRSLDKTRRDQQQRLDAANRQIEALKSAL AEMQTTLTALRAAPKQPEPAAAAAKDSAPAKNAAPKPDAK
Sequences:
>Translated_120_residues MTRRTMTMAMLMTLGCGGVAAAQDVPGIEICTAEKTMERRTSCLQSNVEFLHRSLDKTRRDQQQRLDAANRQIEALKSAL AEMQTTLTALRAAPKQPEPAAAAAKDSAPAKNAAPKPDAK >Mature_119_residues TRRTMTMAMLMTLGCGGVAAAQDVPGIEICTAEKTMERRTSCLQSNVEFLHRSLDKTRRDQQQRLDAANRQIEALKSALA EMQTTLTALRAAPKQPEPAAAAAKDSAPAKNAAPKPDAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12938; Mature: 12807
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRTMTMAMLMTLGCGGVAAAQDVPGIEICTAEKTMERRTSCLQSNVEFLHRSLDKTRR CCCHHHHHHHHHHHCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQQQRLDAANRQIEALKSALAEMQTTLTALRAAPKQPEPAAAAAKDSAPAKNAAPKPDAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TRRTMTMAMLMTLGCGGVAAAQDVPGIEICTAEKTMERRTSCLQSNVEFLHRSLDKTRR CCHHHHHHHHHHHCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQQQRLDAANRQIEALKSALAEMQTTLTALRAAPKQPEPAAAAAKDSAPAKNAAPKPDAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA