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The map label for this gene is fecI [C]

Identifier: 86748931

GI number: 86748931

Start: 2067910

End: 2068815

Strand: Direct

Name: fecI [C]

Synonym: RPB_1808

Alternate gene names: 86748931

Gene position: 2067910-2068815 (Clockwise)

Preceding gene: 86748930

Following gene: 86748932

Centisome position: 38.79

GC content: 71.63

Gene sequence:

>906_bases
ATGCCAAAGCCTCCTGAGCCCACGATCAGCGACGACGCCGCAGCGAGCTTCGCAACGCTGCGCGCGCGGCTGGTCCGCGT
CGCCTATCGCATGCTCGGCTCGGTCGCCGAGGCCGAAGACGTGGTGCAGGACGCTTACTTGCGCTGGCACCGGACCGATC
GCGCCGAGGTGCGCGATCCCGCGGGGTTTCTGACCCGGACCGTGACCCGGCTGTGCCTCGACGTGCTGAAATCGGCGCGG
CTCAGGCGCGAGACCTATATCGGACCATGGCTGCCCGAGCCGCTGATCGCCGATCCGTGCGAGGACGAGGGCGACGACAT
CACGCTCACCTTGATGCTGGCGCTGGAGCGGCTGTCGCCGCTCGAGCGCGCGGCGTTCCTGCTGCACGACGTGTTCGGCC
TCGGCTTCGACGAGATCGCCCGCACCCTCGACCGCGACGCCGCCGCCTGCCGCCAGCTCGCCGCGCGCGCCCGCGGCCAT
GTCCGGGCCGAGCGGCCGCGCTTTCCGGTGTCGGAGGAGCGCGGCCAGGCGATCGCCGGGGCGTTCTTCGAGGCGTCGCG
CAGCGGCGATCTGAAGGCGCTGACCGCGCTGCTCGCCGACGACGTGGTGTTCTACGGCGACGGCGGCGGCAAGCGCCCGG
CGACGCTGAACCCGATCTTCGGCCTCGCCAAAGTGGCCCGGCTGTTCGAAGGCCTCGCGCGCAAGCATGCCCCCGGTGCG
TCGGTCGTGGTCTCGACCGGGCGCATCGACGGGCTGCCCGGCTTCGTCACCACCGAGCCCGACGGGCTGATCCAGACCAC
CGCGCTCGCCATCGAACACGACCGCATCGTCGCGATCTATGTGGTGCGCAATCCGGACAAGCTGCGCCATCTGCTGGCGC
TCTCGGCCGTCCCCGCGCGGCCCTGA

Upstream 100 bases:

>100_bases
GCCGAGCAGGCCAATCTCACCATCCTGATCGGCGCGATCAACACCTGGAATCGGATCGCGATCGGCTTCCGCCTGATCCA
TCCGGTCGCACCCGCCCTCC

Downstream 100 bases:

>100_bases
GCGGTGAGCGGGCGACCCCGCAGCGCCGCCCTGCTCGGGTGATCACGGGTATTTTCCCGCCGATCGTAACCGCTTCTTAA
CCCTGATTAGCGTTTGGTTA

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-; ECF-Sigma Factor; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma Factor Sigma-70 Family Protein; RNA Polymerase ECF-Type Sigma Factor; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase; AlteRNAtive RNA Polymerase Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Subunit; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MPKPPEPTISDDAAASFATLRARLVRVAYRMLGSVAEAEDVVQDAYLRWHRTDRAEVRDPAGFLTRTVTRLCLDVLKSAR
LRRETYIGPWLPEPLIADPCEDEGDDITLTLMLALERLSPLERAAFLLHDVFGLGFDEIARTLDRDAAACRQLAARARGH
VRAERPRFPVSEERGQAIAGAFFEASRSGDLKALTALLADDVVFYGDGGGKRPATLNPIFGLAKVARLFEGLARKHAPGA
SVVVSTGRIDGLPGFVTTEPDGLIQTTALAIEHDRIVAIYVVRNPDKLRHLLALSAVPARP

Sequences:

>Translated_301_residues
MPKPPEPTISDDAAASFATLRARLVRVAYRMLGSVAEAEDVVQDAYLRWHRTDRAEVRDPAGFLTRTVTRLCLDVLKSAR
LRRETYIGPWLPEPLIADPCEDEGDDITLTLMLALERLSPLERAAFLLHDVFGLGFDEIARTLDRDAAACRQLAARARGH
VRAERPRFPVSEERGQAIAGAFFEASRSGDLKALTALLADDVVFYGDGGGKRPATLNPIFGLAKVARLFEGLARKHAPGA
SVVVSTGRIDGLPGFVTTEPDGLIQTTALAIEHDRIVAIYVVRNPDKLRHLLALSAVPARP
>Mature_300_residues
PKPPEPTISDDAAASFATLRARLVRVAYRMLGSVAEAEDVVQDAYLRWHRTDRAEVRDPAGFLTRTVTRLCLDVLKSARL
RRETYIGPWLPEPLIADPCEDEGDDITLTLMLALERLSPLERAAFLLHDVFGLGFDEIARTLDRDAAACRQLAARARGHV
RAERPRFPVSEERGQAIAGAFFEASRSGDLKALTALLADDVVFYGDGGGKRPATLNPIFGLAKVARLFEGLARKHAPGAS
VVVSTGRIDGLPGFVTTEPDGLIQTTALAIEHDRIVAIYVVRNPDKLRHLLALSAVPARP

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32861; Mature: 32730

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPPEPTISDDAAASFATLRARLVRVAYRMLGSVAEAEDVVQDAYLRWHRTDRAEVRDP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCH
AGFLTRTVTRLCLDVLKSARLRRETYIGPWLPEPLIADPCEDEGDDITLTLMLALERLSP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCH
LERAAFLLHDVFGLGFDEIARTLDRDAAACRQLAARARGHVRAERPRFPVSEERGQAIAG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHH
AFFEASRSGDLKALTALLADDVVFYGDGGGKRPATLNPIFGLAKVARLFEGLARKHAPGA
HHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SVVVSTGRIDGLPGFVTTEPDGLIQTTALAIEHDRIVAIYVVRNPDKLRHLLALSAVPAR
EEEEECCCCCCCCCCEECCCCCHHHHHHHEEECCCEEEEEEEECHHHHHHHHHHHCCCCC
P
C
>Mature Secondary Structure 
PKPPEPTISDDAAASFATLRARLVRVAYRMLGSVAEAEDVVQDAYLRWHRTDRAEVRDP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCH
AGFLTRTVTRLCLDVLKSARLRRETYIGPWLPEPLIADPCEDEGDDITLTLMLALERLSP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCH
LERAAFLLHDVFGLGFDEIARTLDRDAAACRQLAARARGHVRAERPRFPVSEERGQAIAG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHH
AFFEASRSGDLKALTALLADDVVFYGDGGGKRPATLNPIFGLAKVARLFEGLARKHAPGA
HHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SVVVSTGRIDGLPGFVTTEPDGLIQTTALAIEHDRIVAIYVVRNPDKLRHLLALSAVPAR
EEEEECCCCCCCCCCEECCCCCHHHHHHHEEECCCEEEEEEEECHHHHHHHHHHHCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA