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The map label for this gene is 86748928

Identifier: 86748928

GI number: 86748928

Start: 2065983

End: 2066690

Strand: Direct

Name: 86748928

Synonym: RPB_1805

Alternate gene names: NA

Gene position: 2065983-2066690 (Clockwise)

Preceding gene: 86748927

Following gene: 86748929

Centisome position: 38.75

GC content: 68.93

Gene sequence:

>708_bases
ATGAGCTGGCGCAAGGAAGAGCGCCGCGCCGAGCGCGGCTATCATCACGGCAATCTGAAGGAGGCGCTGCTGCAGGCGGC
GCTCGGGCTGATCGCGGAGAAGGGGCCTGCCGGCTTCACCTTCGCCGATGCCGCGCGGATGGCCGGCGTCAGCCCGGCCG
CGCCGTATAGGCACTTCCGCGATCGCGAGGAATTGCTCTCGAACATCGCCTACCGCGGCTTCGAACTGTTCGAGCAGGTG
CTCGCCAAGGCCTGGGACGACGGCCGTCCCGACACGCTCACGGCGTTCAAGCGGGTCGGCTCGGCCTATCTCGCCTTCGC
CCGCAGCGAGCCGGCCTACTACTCGGCGATGTTCGAATCCGGCGTTCCGGTCGACGCCAATCCGCTGCTGATGACGGCGT
CGGAACGCGCCTTCAATGTGATTCGCGCCGCCGCCGAACGGCTCGCCGCGCTCACGCCGCCGGGAGTCGCGAGGCCGCCG
GCGCTGATGATGGCGCTGCACATCTGGTCGATGTCGCACGGCATCGCCTCGCTGTTTGCCCGTGGCGATGCCGCGCGGCG
CAAGCTGCCGATGGCCGCGGAAGAGCTGCTGGAAGCCGGCGTGCTGATCTATCTGCGCGGCCTGGGATTCCCGGCCGACC
TTCGGTCACAGCCGGAAAAGCCTGCAGAACCAAAGCGTTCCGGACCGTGGGGCGCGGCCCCGCAATAG

Upstream 100 bases:

>100_bases
CGCCGCAAGCAGTTCCGGTGCTCGTTGCGCGTCGACGCCGGCGCCGGCCCGCCGTCGAAAGCCGTGACCTTTGCATCCCG
CTGATGTAAAAGCCCTTCAC

Downstream 100 bases:

>100_bases
TCGCGCTCACCACGATGTGAGCGCCGCGCGAAATTGTCGCCCCGACCGGAACCCGCTCTGGCTTGACAAAACCGTAGATT
GGCTTAGCTATGTAAATGTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Regulatory Protein Tetr; Transcription Regulator TetR Family Protein; Transcriptional Regulator TetR-Family; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulator TetR; Sensor Histidine Kinase/Response Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSWRKEERRAERGYHHGNLKEALLQAALGLIAEKGPAGFTFADAARMAGVSPAAPYRHFRDREELLSNIAYRGFELFEQV
LAKAWDDGRPDTLTAFKRVGSAYLAFARSEPAYYSAMFESGVPVDANPLLMTASERAFNVIRAAAERLAALTPPGVARPP
ALMMALHIWSMSHGIASLFARGDAARRKLPMAAEELLEAGVLIYLRGLGFPADLRSQPEKPAEPKRSGPWGAAPQ

Sequences:

>Translated_235_residues
MSWRKEERRAERGYHHGNLKEALLQAALGLIAEKGPAGFTFADAARMAGVSPAAPYRHFRDREELLSNIAYRGFELFEQV
LAKAWDDGRPDTLTAFKRVGSAYLAFARSEPAYYSAMFESGVPVDANPLLMTASERAFNVIRAAAERLAALTPPGVARPP
ALMMALHIWSMSHGIASLFARGDAARRKLPMAAEELLEAGVLIYLRGLGFPADLRSQPEKPAEPKRSGPWGAAPQ
>Mature_234_residues
SWRKEERRAERGYHHGNLKEALLQAALGLIAEKGPAGFTFADAARMAGVSPAAPYRHFRDREELLSNIAYRGFELFEQVL
AKAWDDGRPDTLTAFKRVGSAYLAFARSEPAYYSAMFESGVPVDANPLLMTASERAFNVIRAAAERLAALTPPGVARPPA
LMMALHIWSMSHGIASLFARGDAARRKLPMAAEELLEAGVLIYLRGLGFPADLRSQPEKPAEPKRSGPWGAAPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25705; Mature: 25574

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWRKEERRAERGYHHGNLKEALLQAALGLIAEKGPAGFTFADAARMAGVSPAAPYRHFR
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHC
DREELLSNIAYRGFELFEQVLAKAWDDGRPDTLTAFKRVGSAYLAFARSEPAYYSAMFES
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
GVPVDANPLLMTASERAFNVIRAAAERLAALTPPGVARPPALMMALHIWSMSHGIASLFA
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGDAARRKLPMAAEELLEAGVLIYLRGLGFPADLRSQPEKPAEPKRSGPWGAAPQ
HCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SWRKEERRAERGYHHGNLKEALLQAALGLIAEKGPAGFTFADAARMAGVSPAAPYRHFR
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHC
DREELLSNIAYRGFELFEQVLAKAWDDGRPDTLTAFKRVGSAYLAFARSEPAYYSAMFES
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
GVPVDANPLLMTASERAFNVIRAAAERLAALTPPGVARPPALMMALHIWSMSHGIASLFA
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGDAARRKLPMAAEELLEAGVLIYLRGLGFPADLRSQPEKPAEPKRSGPWGAAPQ
HCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA