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The map label for this gene is 86748901

Identifier: 86748901

GI number: 86748901

Start: 2039454

End: 2040263

Strand: Direct

Name: 86748901

Synonym: RPB_1778

Alternate gene names: NA

Gene position: 2039454-2040263 (Clockwise)

Preceding gene: 86748898

Following gene: 86748911

Centisome position: 38.25

GC content: 71.36

Gene sequence:

>810_bases
GTGAGTAAAGTTGCCATGCGCCAGCTGTCTTGTCTCGCCCGGTTTCTCGCCTCCGCGGCCGTGACCGTGGCGATGGCGAC
GGCGCTCGCCGGCTGCCAGACCGCCGGCATGTCCGGCATCACCGGCTCGCTCGGCGCCCGCGCCGAGGCACCGGCCGATC
CCGGCCGCGCCGCCGAGATCGCGGGCGAGCGCTACCGGTCCAATCCGAAGGATCCCGGCGCGGCGCTTGCCTATGGCCAG
GCCTTGCGCGCGATCGGTCAGCGCGCCCAGGCGGTGGCGATGCTGGAGAAGGCGACGCTCGCCAATCCCGGCAACAAGGC
GGTGCTCGCCGGCTATGGCCGCGCGCTCGCCGACAACGGCAATTTCAGCGCAGCGTTCGAGGCGCTGTCGAACGCGCACA
GCCCGGACAATCCGGATTGGCGGATCCTGTCGGTGCAGGGCGCCGTGCTCGATCAGATGGGCCGCAGCGACGAGGCGCGG
CGCTATTACGCCAGCGCGCTCCGGCTCGCGCCCGGCGAGCCGTCGGTGCTGTCCAATCTCGGCCTGTCCTACATGTTGAC
CAAGGACCTGCCGAAAGCGGAGGCGACGCTGCGCCAGGCCTATGCCAGCGGCCGGGCCGATGCGCGGGTGCGACAGAATC
TGGCGCTCGTCGTCGGGTTGCAGGGCCGCTTCGCCGAAGCCGAAGGAATCGTGCGATCCGATCTGCCGCCCGACGAGGCC
GCCGCCAACGTCGCTTATCTGAAGCAGATGCTGGACGGCAAGGGCGACCCGCGCGGCCGCGGCCGCGGCGTGCTGGCCTC
CGGCGACTGA

Upstream 100 bases:

>100_bases
GAGTCGATTCGAGGCGAGGGGAGGGATCGCGGTGATTAACCGGACATTAGGGTTAACGCTCTATTGCTGGGCTCCTGTTG
GAATTTGTCCGGTCGGCTTC

Downstream 100 bases:

>100_bases
TCATTCCCCACCGCCAGCACGACCATCACGCTCGTGTCGTCGTGCGACGCAGCGTTCACTGCATCGCTGCGACCCTGATC
CCGGTCGGCCCGAGGATCAC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Pilus Assembly Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide; Flp Pilus Assembly Protein TadD; Tetratricopeptide-Repeat Containing Protein

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSKVAMRQLSCLARFLASAAVTVAMATALAGCQTAGMSGITGSLGARAEAPADPGRAAEIAGERYRSNPKDPGAALAYGQ
ALRAIGQRAQAVAMLEKATLANPGNKAVLAGYGRALADNGNFSAAFEALSNAHSPDNPDWRILSVQGAVLDQMGRSDEAR
RYYASALRLAPGEPSVLSNLGLSYMLTKDLPKAEATLRQAYASGRADARVRQNLALVVGLQGRFAEAEGIVRSDLPPDEA
AANVAYLKQMLDGKGDPRGRGRGVLASGD

Sequences:

>Translated_269_residues
MSKVAMRQLSCLARFLASAAVTVAMATALAGCQTAGMSGITGSLGARAEAPADPGRAAEIAGERYRSNPKDPGAALAYGQ
ALRAIGQRAQAVAMLEKATLANPGNKAVLAGYGRALADNGNFSAAFEALSNAHSPDNPDWRILSVQGAVLDQMGRSDEAR
RYYASALRLAPGEPSVLSNLGLSYMLTKDLPKAEATLRQAYASGRADARVRQNLALVVGLQGRFAEAEGIVRSDLPPDEA
AANVAYLKQMLDGKGDPRGRGRGVLASGD
>Mature_268_residues
SKVAMRQLSCLARFLASAAVTVAMATALAGCQTAGMSGITGSLGARAEAPADPGRAAEIAGERYRSNPKDPGAALAYGQA
LRAIGQRAQAVAMLEKATLANPGNKAVLAGYGRALADNGNFSAAFEALSNAHSPDNPDWRILSVQGAVLDQMGRSDEARR
YYASALRLAPGEPSVLSNLGLSYMLTKDLPKAEATLRQAYASGRADARVRQNLALVVGLQGRFAEAEGIVRSDLPPDEAA
ANVAYLKQMLDGKGDPRGRGRGVLASGD

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27900; Mature: 27769

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVAMRQLSCLARFLASAAVTVAMATALAGCQTAGMSGITGSLGARAEAPADPGRAAEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
AGERYRSNPKDPGAALAYGQALRAIGQRAQAVAMLEKATLANPGNKAVLAGYGRALADNG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHCCCC
NFSAAFEALSNAHSPDNPDWRILSVQGAVLDQMGRSDEARRYYASALRLAPGEPSVLSNL
CHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHC
GLSYMLTKDLPKAEATLRQAYASGRADARVRQNLALVVGLQGRFAEAEGIVRSDLPPDEA
CCCEEECCCCCHHHHHHHHHHHCCCCHHHHHCCEEEEEECCCCCHHHCCCHHCCCCCHHH
AANVAYLKQMLDGKGDPRGRGRGVLASGD
HHHHHHHHHHHCCCCCCCCCCCEEECCCC
>Mature Secondary Structure 
SKVAMRQLSCLARFLASAAVTVAMATALAGCQTAGMSGITGSLGARAEAPADPGRAAEI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
AGERYRSNPKDPGAALAYGQALRAIGQRAQAVAMLEKATLANPGNKAVLAGYGRALADNG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHCCCC
NFSAAFEALSNAHSPDNPDWRILSVQGAVLDQMGRSDEARRYYASALRLAPGEPSVLSNL
CHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHC
GLSYMLTKDLPKAEATLRQAYASGRADARVRQNLALVVGLQGRFAEAEGIVRSDLPPDEA
CCCEEECCCCCHHHHHHHHHHHCCCCHHHHHCCEEEEEECCCCCHHHCCCHHCCCCCHHH
AANVAYLKQMLDGKGDPRGRGRGVLASGD
HHHHHHHHHHHCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA